DatasetMast.Mast_Pheno.cls
#Group1_versus_Group3.Mast_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeMast_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.32217294
Normalized Enrichment Score (NES)-1.2570027
Nominal p-value0.19444445
FDR q-value0.8002559
FWER p-Value0.903
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Tdrd7270.9990.0186No
2Lats2680.8790.0336No
3Btg11700.7250.0405No
4Il10ra3630.6150.0376No
5Pfkp3690.6130.0500No
6Il64110.5960.0590No
7Il15ra4530.5790.0677No
8Cmtr16030.5350.0667No
9Cmklr17460.4970.0655No
10Eif4e37680.4910.0740No
11Ripk18210.4780.0797No
12Stat29120.4570.0819No
13Tnfaip39830.4440.0855No
14Trafd19990.4410.0934No
15Cd6911170.4170.0925No
16Tnfsf1011720.4080.0966No
17Sppl2a12640.3940.0974No
18Stat313000.3870.1026No
19Itgb713530.3790.1063No
20Trim2615740.3480.0956No
21Samd9l16040.3460.1004No
22Sp11017010.3340.0996No
23Nup9318130.3190.0972No
24Icam118720.3130.0990No
25Irf518750.3130.1053No
26Ifit219520.3050.1055No
27Hif1a19640.3050.1109No
28Selp20220.2990.1125No
29Casp723040.2720.0953No
30Txnip23060.2720.1009No
31Isg2024490.2590.0947No
32Cdkn1a25660.2480.0904No
33Helz227120.2350.0835No
34Irf828040.2270.0808No
35Ncoa328050.2270.0855No
36Nfkbia31120.2000.0648No
37Ptpn635430.1640.0332No
38Il4ra35550.1630.0357No
39Rigi36220.1580.0336No
40Ptpn136520.1560.0345No
41Mthfd236680.1550.0365No
42Gch138820.1360.0220No
43St8sia439470.1310.0196No
44Nampt41580.1150.0049No
45Psme243120.107-0.0054No
46Lcp243680.103-0.0077No
47Bank145190.092-0.0180No
48Ripk246400.083-0.0260No
49Pnpt147790.073-0.0357No
50Auts248500.068-0.0400No
51Psmb949950.056-0.0506No
52Tap150570.053-0.0544No
53Dhx5852230.041-0.0670No
54Arl4a52420.040-0.0676No
55Ciita52450.040-0.0670No
56Arid5b54500.025-0.0830No
57Ifi2755750.017-0.0928No
58Ptpn257710.005-0.1085No
59Oas25987-0.010-0.1258No
60P2ry146066-0.016-0.1318No
61Lap36581-0.050-0.1726No
62Usp186701-0.058-0.1811No
63Nod16804-0.065-0.1880No
64Isoc16845-0.067-0.1899No
65Pla2g4a6861-0.068-0.1897No
66Wars17084-0.084-0.2060No
67Casp87097-0.085-0.2052No
68Mvp7121-0.087-0.2053No
69Ifih17145-0.089-0.2053No
70Plscr17173-0.090-0.2056No
71Myd887240-0.095-0.2090No
72Il157410-0.104-0.2206No
73Psmb27503-0.110-0.2258No
74Mx27531-0.112-0.2257No
75Xaf17584-0.116-0.2275No
76Ddx607952-0.142-0.2544No
77Slc25a287981-0.144-0.2537No
78Stat18146-0.156-0.2638No
79Irf18213-0.161-0.2658No
80Irf28507-0.183-0.2858No
81Isg158669-0.195-0.2949No
82Irf98721-0.199-0.2949No
83Trim148829-0.206-0.2993No
84Tnfaip29017-0.219-0.3100No
85H2-DMa9164-0.231-0.3171No
86Nlrc59227-0.235-0.3172Yes
87Rtp49263-0.238-0.3151Yes
88Zbp19281-0.239-0.3115Yes
89Ogfr9413-0.250-0.3170Yes
90Trim219445-0.252-0.3143Yes
91Gbp39541-0.262-0.3165Yes
92Cmpk29577-0.265-0.3139Yes
93Ifitm29592-0.266-0.3095Yes
94B2m9693-0.273-0.3120Yes
95Tapbp9720-0.276-0.3083Yes
96Psmb109736-0.277-0.3038Yes
97Psma29742-0.277-0.2985Yes
98Parp149769-0.280-0.2948Yes
99Tor1b9815-0.284-0.2925Yes
100Ifi359893-0.291-0.2927Yes
101Bpgm9946-0.295-0.2908Yes
102Rbck19955-0.296-0.2853Yes
103Parp1210128-0.311-0.2929Yes
104Rnf3110158-0.315-0.2887Yes
105Fgl210269-0.325-0.2909Yes
106Il710346-0.332-0.2901Yes
107Jak210357-0.333-0.2840Yes
108Rnf21310382-0.335-0.2790Yes
109Casp310466-0.344-0.2786Yes
110Irf710594-0.359-0.2815Yes
111Pim110632-0.364-0.2769Yes
112Oasl110683-0.369-0.2733Yes
113St3gal510701-0.371-0.2670Yes
114Oas310761-0.377-0.2639Yes
115Herc610762-0.377-0.2561Yes
116Znfx110785-0.380-0.2500Yes
117Vamp810835-0.386-0.2460Yes
118Peli110848-0.387-0.2389Yes
119Trim2510872-0.390-0.2327Yes
120Casp110882-0.391-0.2253Yes
121Pml11029-0.411-0.2286Yes
122Psme111043-0.413-0.2211Yes
123Psmb811055-0.414-0.2133Yes
124Batf211097-0.421-0.2079Yes
125Pde4b11185-0.434-0.2060Yes
126Sri11225-0.441-0.2000Yes
127Nfkb111264-0.447-0.1938Yes
128Il18bp11267-0.447-0.1847Yes
129Pnp11301-0.453-0.1779Yes
130Psma311436-0.474-0.1790Yes
131Eif2ak211438-0.474-0.1692Yes
132Cd8611475-0.481-0.1621Yes
133Vamp511485-0.483-0.1528Yes
134Rapgef611573-0.503-0.1494Yes
135Adar11642-0.518-0.1442Yes
136Nmi11752-0.545-0.1417Yes
137Ly6e11794-0.554-0.1336Yes
138Stat411805-0.558-0.1228Yes
139Ifi4411806-0.559-0.1111Yes
140Samhd111840-0.569-0.1020Yes
141Epsti111926-0.602-0.0964Yes
142Ifitm312067-0.656-0.0942Yes
143Casp412125-0.675-0.0848Yes
144Ube2l612128-0.678-0.0708Yes
145Bst212139-0.683-0.0574Yes
146Rsad212170-0.701-0.0453Yes
147Cd27412248-0.770-0.0355Yes
148Sod212261-0.781-0.0203Yes
149Ifnar212299-0.818-0.0063Yes
150Lgals3bp12327-0.8540.0093Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE