Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group3.Mast_Pheno.cls #Group1_versus_Group3_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.23627466
Normalized Enrichment Score (NES)	-1.0381784
Nominal p-value	0.39278558
FDR q-value	0.9345275
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Itpa	55	0.911	0.0210	No
2	Rfc3	302	0.644	0.0190	No
3	Surf1	427	0.589	0.0253	No
4	Rala	503	0.562	0.0349	No
5	Adcy6	681	0.511	0.0348	No
6	Ercc4	802	0.483	0.0385	No
7	Gtf2h1	833	0.476	0.0494	No
8	Polr3gl	860	0.469	0.0603	No
9	Fen1	1129	0.415	0.0501	No
10	Cstf3	1196	0.404	0.0560	No
11	Brf2	1374	0.376	0.0522	No
12	Sac3d1	1466	0.363	0.0549	No
13	Ercc5	1534	0.354	0.0593	No
14	Polr2i	1597	0.346	0.0640	No
15	Gtf3c5	1641	0.340	0.0700	No
16	Rfc5	1746	0.328	0.0707	No
17	Usp11	1767	0.325	0.0781	No
18	Pcna	1908	0.309	0.0754	No
19	Ssrp1	1926	0.307	0.0826	No
20	Polr1h	1969	0.304	0.0876	No
21	Ddb1	2129	0.288	0.0828	No
22	Rrm2b	2220	0.280	0.0833	No
23	Alyref	2271	0.274	0.0869	No
24	Gpx4	2325	0.270	0.0901	No
25	Gtf2b	2397	0.264	0.0917	No
26	Taf1c	2431	0.260	0.0963	No
27	Ada	2534	0.251	0.0950	No
28	Lig1	2750	0.232	0.0840	No
29	Bcap31	2787	0.228	0.0874	No
30	Aprt	2899	0.218	0.0845	No
31	Polr2k	2982	0.211	0.0837	No
32	Rpa2	3023	0.208	0.0863	No
33	Nfx1	3079	0.202	0.0874	No
34	Cetn2	3131	0.198	0.0888	No
35	Ddb2	3336	0.181	0.0773	No
36	Adrm1	3339	0.181	0.0822	No
37	Prim1	3385	0.178	0.0835	No
38	Cant1	3400	0.176	0.0873	No
39	Trp53	3758	0.148	0.0624	No
40	Zwint	3841	0.140	0.0596	No
41	Ercc8	4062	0.122	0.0451	No
42	Tarbp2	4258	0.111	0.0324	No
43	Pole4	4301	0.107	0.0320	No
44	Pold4	4452	0.097	0.0225	No
45	Stx3	4560	0.089	0.0163	No
46	Supt4a	4732	0.076	0.0045	No
47	Polr2a	4783	0.073	0.0024	No
48	Polr1d	4971	0.058	-0.0111	No
49	Nme4	5110	0.049	-0.0210	No
50	Pola1	5202	0.043	-0.0272	No
51	Polr2d	5325	0.034	-0.0362	No
52	Polb	5353	0.032	-0.0375	No
53	Sec61a1	5398	0.028	-0.0403	No
54	Nt5c	5406	0.028	-0.0401	No
55	Ak3	5469	0.024	-0.0444	No
56	Mpg	5525	0.020	-0.0483	No
57	Snapc4	5674	0.012	-0.0600	No
58	Polr1c	5814	0.003	-0.0713	No
59	Ercc3	5956	-0.007	-0.0825	No
60	Rev3l	5965	-0.008	-0.0829	No
61	Pold3	5996	-0.010	-0.0851	No
62	Nelfe	6008	-0.012	-0.0856	No
63	Polr2c	6049	-0.015	-0.0885	No
64	Dctn4	6124	-0.019	-0.0940	No
65	Gtf2f1	6151	-0.022	-0.0955	No
66	Supt5	6185	-0.024	-0.0975	No
67	Edf1	6294	-0.031	-0.1054	No
68	Gsdme	6367	-0.035	-0.1103	No
69	Rad51	6375	-0.036	-0.1098	No
70	Nt5c3	6427	-0.039	-0.1129	No
71	Guk1	6619	-0.053	-0.1269	No
72	Ercc2	6670	-0.056	-0.1294	No
73	Nudt9	6685	-0.057	-0.1290	No
74	Upf3b	6690	-0.057	-0.1277	No
75	Ell	6758	-0.062	-0.1314	No
76	Nme1	7151	-0.089	-0.1608	No
77	Ercc1	7234	-0.094	-0.1648	No
78	Taf6	7774	-0.129	-0.2051	No
79	Xpc	7803	-0.131	-0.2037	No
80	Nelfcd	7838	-0.133	-0.2027	No
81	Hcls1	7840	-0.133	-0.1991	No
82	Rfc4	7843	-0.133	-0.1955	No
83	Polh	7876	-0.136	-0.1943	No
84	Pola2	7926	-0.140	-0.1944	No
85	Taf13	7963	-0.142	-0.1934	No
86	Sdcbp	7966	-0.143	-0.1896	No
87	Smad5	8012	-0.146	-0.1891	No
88	Gmpr2	8047	-0.148	-0.1878	No
89	Clp1	8255	-0.164	-0.2000	No
90	Aaas	8363	-0.172	-0.2039	No
91	Dguok	8414	-0.177	-0.2031	No
92	Rfc2	8571	-0.189	-0.2105	No
93	Impdh2	8642	-0.194	-0.2108	No
94	Ago4	8733	-0.199	-0.2125	No
95	Srsf6	8747	-0.200	-0.2080	No
96	Vps37b	8757	-0.200	-0.2031	No
97	Tyms	8808	-0.204	-0.2015	No
98	Polr2e	8999	-0.217	-0.2109	No
99	Pom121	9215	-0.235	-0.2218	No
100	Taf12	9340	-0.244	-0.2251	No
101	Tk2	9421	-0.251	-0.2246	No
102	Polr2f	9566	-0.264	-0.2289	Yes
103	Cmpk2	9577	-0.265	-0.2223	Yes
104	Dad1	9676	-0.271	-0.2227	Yes
105	Gtf2h5	9690	-0.273	-0.2162	Yes
106	Nudt21	9709	-0.274	-0.2100	Yes
107	Eloa	9791	-0.281	-0.2087	Yes
108	Poll	9858	-0.287	-0.2061	Yes
109	Zfp707	10053	-0.304	-0.2133	Yes
110	Pold1	10054	-0.304	-0.2048	Yes
111	Rnmt	10079	-0.306	-0.1983	Yes
112	Eif1b	10137	-0.312	-0.1942	Yes
113	Gtf2h3	10174	-0.316	-0.1883	Yes
114	Polr2j	10246	-0.323	-0.1851	Yes
115	Vps28	10304	-0.328	-0.1805	Yes
116	Cox17	10319	-0.329	-0.1725	Yes
117	Rae1	10353	-0.333	-0.1659	Yes
118	Nelfb	10411	-0.339	-0.1611	Yes
119	Dut	10509	-0.349	-0.1592	Yes
120	Npr2	10797	-0.381	-0.1719	Yes
121	Rad52	10799	-0.381	-0.1613	Yes
122	Dgcr8	10970	-0.403	-0.1639	Yes
123	Taf10	10974	-0.404	-0.1529	Yes
124	Mpc2	11000	-0.407	-0.1435	Yes
125	Polr3c	11161	-0.432	-0.1445	Yes
126	Pde4b	11185	-0.434	-0.1342	Yes
127	Mrpl40	11252	-0.445	-0.1272	Yes
128	Sf3a3	11274	-0.448	-0.1164	Yes
129	Pnp	11301	-0.453	-0.1058	Yes
130	Polr2g	11417	-0.471	-0.1020	Yes
131	Tsg101	11434	-0.473	-0.0901	Yes
132	Taf9	11479	-0.482	-0.0802	Yes
133	Umps	11480	-0.482	-0.0668	Yes
134	Rpa3	11657	-0.521	-0.0665	Yes
135	Rbx1	11726	-0.538	-0.0570	Yes
136	Arl6ip1	11755	-0.545	-0.0441	Yes
137	Polr2h	12146	-0.686	-0.0567	Yes
138	Gtf2a2	12279	-0.798	-0.0451	Yes
139	Snapc5	12397	-0.993	-0.0269	Yes
140	Ncbp2	12415	-1.089	0.0021	Yes