Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group3.Mast_Pheno.cls #Group1_versus_Group3_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	-0.21349211
Normalized Enrichment Score (NES)	-0.9587465
Nominal p-value	0.5304878
FDR q-value	0.9145504
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Sirpa	95	0.831	0.0233	No
2	Ywhah	154	0.737	0.0461	No
3	Plcg1	413	0.595	0.0474	No
4	Vcan	471	0.573	0.0641	No
5	Inppl1	519	0.560	0.0812	No
6	Adam9	1036	0.431	0.0554	No
7	Tial1	1088	0.420	0.0670	No
8	Tspan4	1161	0.411	0.0765	No
9	Nlgn2	1171	0.408	0.0910	No
10	Itgb4	1281	0.390	0.0967	No
11	Map4k2	1440	0.367	0.0976	No
12	Pals1	1556	0.351	0.1013	No
13	Mpzl1	1771	0.325	0.0961	No
14	Icam1	1872	0.313	0.0997	No
15	Cd34	2061	0.295	0.0954	No
16	Pten	2074	0.294	0.1054	No
17	Evl	2159	0.285	0.1092	No
18	Baiap2	2299	0.272	0.1081	No
19	Ctnna1	2560	0.249	0.0963	No
20	Nrap	2894	0.218	0.0775	No
21	Layn	3021	0.208	0.0750	No
22	Ptk2	3180	0.194	0.0694	No
23	Myh9	3229	0.190	0.0726	No
24	Cap1	3393	0.177	0.0660	No
25	Lima1	3447	0.172	0.0682	No
26	Adam15	3752	0.148	0.0490	No
27	Sympk	3765	0.147	0.0535	No
28	Vwf	3931	0.132	0.0451	No
29	Icam5	4233	0.112	0.0249	No
30	Ikbkg	4287	0.108	0.0246	No
31	Dlg1	4349	0.104	0.0236	No
32	Tmem8b	4761	0.074	-0.0070	No
33	Insig1	4967	0.058	-0.0215	No
34	Jup	5033	0.055	-0.0247	No
35	Src	5067	0.052	-0.0254	No
36	Akt3	5101	0.050	-0.0262	No
37	Pik3cb	5180	0.044	-0.0309	No
38	Pbx2	5281	0.036	-0.0377	No
39	Pard6g	5313	0.034	-0.0389	No
40	Pecam1	5392	0.029	-0.0442	No
41	Vcl	5444	0.025	-0.0474	No
42	Epb41l2	5552	0.018	-0.0554	No
43	Actg1	5784	0.004	-0.0739	No
44	Cdh1	5791	0.004	-0.0743	No
45	Msn	5912	-0.003	-0.0839	No
46	Actn4	5931	-0.004	-0.0852	No
47	Wasl	6032	-0.014	-0.0928	No
48	Gtf2f1	6151	-0.022	-0.1015	No
49	Rac2	6154	-0.022	-0.1009	No
50	Hadh	6180	-0.024	-0.1020	No
51	Amigo2	6208	-0.025	-0.1033	No
52	Pkd1	6246	-0.028	-0.1052	No
53	Ptprc	6421	-0.039	-0.1179	No
54	Icam2	6624	-0.053	-0.1323	No
55	Nf2	6695	-0.058	-0.1358	No
56	Vasp	6727	-0.060	-0.1361	No
57	Pik3r3	6773	-0.062	-0.1374	No
58	Myh10	6795	-0.064	-0.1367	No
59	Cercam	6906	-0.071	-0.1430	No
60	Itgb1	7014	-0.078	-0.1488	No
61	Nectin1	7056	-0.082	-0.1491	No
62	Ctnnd1	7114	-0.086	-0.1505	No
63	Taok2	7150	-0.089	-0.1500	No
64	Map3k20	7245	-0.095	-0.1540	No
65	Rasa1	7265	-0.096	-0.1520	No
66	Tjp1	7395	-0.103	-0.1586	No
67	Icam4	7873	-0.136	-0.1922	No
68	Cdk8	7925	-0.140	-0.1911	No
69	Gnai2	8000	-0.145	-0.1917	No
70	Skap2	8026	-0.147	-0.1883	No
71	Mapk14	8038	-0.148	-0.1837	No
72	Nlgn3	8048	-0.148	-0.1789	No
73	Myl12b	8476	-0.181	-0.2067	Yes
74	Exoc4	8482	-0.181	-0.2004	Yes
75	Cnn2	8489	-0.182	-0.1941	Yes
76	Arpc2	8563	-0.188	-0.1930	Yes
77	Akt2	8640	-0.193	-0.1919	Yes
78	Rhof	8855	-0.207	-0.2015	Yes
79	Bmp1	8860	-0.208	-0.1941	Yes
80	Vav2	8907	-0.211	-0.1900	Yes
81	Syk	8963	-0.215	-0.1864	Yes
82	Fbn1	9128	-0.227	-0.1912	Yes
83	Dhx16	9205	-0.234	-0.1886	Yes
84	Arhgef6	9317	-0.243	-0.1886	Yes
85	Itga10	9318	-0.243	-0.1795	Yes
86	Nf1	9441	-0.252	-0.1800	Yes
87	Ldlrap1	9464	-0.254	-0.1723	Yes
88	Stx4a	9506	-0.258	-0.1660	Yes
89	Zyx	9679	-0.271	-0.1699	Yes
90	Nectin2	9752	-0.278	-0.1653	Yes
91	Rsu1	9903	-0.292	-0.1666	Yes
92	Nectin4	9983	-0.298	-0.1619	Yes
93	Actb	10101	-0.308	-0.1599	Yes
94	Itga9	10324	-0.330	-0.1656	Yes
95	Tubg1	10406	-0.338	-0.1595	Yes
96	Cadm2	10543	-0.354	-0.1574	Yes
97	Tsc1	10570	-0.356	-0.1462	Yes
98	Shc1	10643	-0.365	-0.1384	Yes
99	Sgce	10849	-0.387	-0.1406	Yes
100	B4galt1	11206	-0.438	-0.1531	Yes
101	Itga2	11253	-0.445	-0.1402	Yes
102	Amigo1	11348	-0.462	-0.1306	Yes
103	Hras	11359	-0.463	-0.1142	Yes
104	Cd86	11475	-0.481	-0.1055	Yes
105	Lamb3	11722	-0.537	-0.1054	Yes
106	Crat	11745	-0.544	-0.0869	Yes
107	Sorbs3	11762	-0.546	-0.0679	Yes
108	Actn1	11785	-0.551	-0.0491	Yes
109	Pfn1	11904	-0.590	-0.0366	Yes
110	Atp1a3	12044	-0.644	-0.0239	Yes
111	Mmp2	12201	-0.729	-0.0093	Yes
112	Cd274	12248	-0.770	0.0157	Yes