Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group2.Mast_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.24447852
Normalized Enrichment Score (NES)	-1.045062
Nominal p-value	0.34555984
FDR q-value	1.0
FWER p-Value	0.982

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gtf2f1	72	0.849	0.0195	No
2	Rae1	122	0.778	0.0387	No
3	Cstf3	294	0.641	0.0440	No
4	Fen1	340	0.618	0.0588	No
5	Upf3b	363	0.610	0.0752	No
6	Pold4	627	0.525	0.0695	No
7	Rala	761	0.490	0.0733	No
8	Nfx1	1051	0.434	0.0627	No
9	Vps37b	1171	0.413	0.0654	No
10	Gtf2h1	1240	0.403	0.0719	No
11	Adcy6	1326	0.390	0.0767	No
12	Itpa	1764	0.337	0.0512	No
13	Sac3d1	1775	0.335	0.0604	No
14	Pcna	1802	0.331	0.0682	No
15	Polr3gl	1962	0.312	0.0646	No
16	Aaas	2145	0.294	0.0585	No
17	Dad1	2347	0.276	0.0504	No
18	Cant1	2586	0.255	0.0387	No
19	Surf1	2618	0.253	0.0437	No
20	Rrm2b	2627	0.252	0.0506	No
21	Ercc2	2722	0.244	0.0502	No
22	Ercc8	2774	0.240	0.0532	No
23	Usp11	2877	0.230	0.0518	No
24	Supt5	2969	0.222	0.0510	No
25	Polr2a	3111	0.212	0.0459	No
26	Ak3	3224	0.204	0.0429	No
27	Trp53	3265	0.200	0.0456	No
28	Lig1	3318	0.196	0.0472	No
29	Gtf2b	3323	0.196	0.0528	No
30	Cox17	3340	0.195	0.0573	No
31	Alyref	3343	0.194	0.0629	No
32	Mrpl40	3377	0.191	0.0659	No
33	Rfc5	3428	0.188	0.0675	No
34	Rpa2	3453	0.186	0.0711	No
35	Nelfcd	3767	0.164	0.0505	No
36	Srsf6	3817	0.161	0.0514	No
37	Dctn4	3849	0.159	0.0536	No
38	Polr1c	4054	0.143	0.0413	No
39	Gtf2h3	4363	0.123	0.0199	No
40	Pom121	4371	0.122	0.0230	No
41	Taf6	4440	0.117	0.0210	No
42	Nt5c3	4505	0.113	0.0191	No
43	Nme1	4678	0.103	0.0082	No
44	Brf2	4704	0.101	0.0092	No
45	Sf3a3	4720	0.100	0.0110	No
46	Polr2i	4795	0.095	0.0078	No
47	Polr2f	4909	0.087	0.0012	No
48	Gtf2h5	5263	0.064	-0.0256	No
49	Pole4	5396	0.055	-0.0347	No
50	Arl6ip1	5432	0.052	-0.0360	No
51	Sec61a1	5497	0.047	-0.0398	No
52	Pola2	5501	0.047	-0.0387	No
53	Ddb2	5793	0.027	-0.0615	No
54	Hcls1	5819	0.026	-0.0628	No
55	Polr1h	5874	0.022	-0.0665	No
56	Polr2d	5906	0.020	-0.0684	No
57	Zwint	5910	0.020	-0.0680	No
58	Rfc3	6120	0.006	-0.0848	No
59	Ddb1	6143	0.004	-0.0865	No
60	Ercc3	6213	0.000	-0.0921	No
61	Gsdme	6259	-0.003	-0.0957	No
62	Polr2e	6291	-0.005	-0.0981	No
63	Ercc5	6331	-0.008	-0.1010	No
64	Guk1	6398	-0.011	-0.1060	No
65	Snapc5	6413	-0.012	-0.1068	No
66	Ada	6459	-0.015	-0.1100	No
67	Bcap31	6499	-0.018	-0.1127	No
68	Rad51	6547	-0.022	-0.1158	No
69	Ercc4	6735	-0.032	-0.1301	No
70	Taf9	6798	-0.034	-0.1341	No
71	Eloa	6827	-0.036	-0.1353	No
72	Nme4	7047	-0.051	-0.1516	No
73	Poll	7164	-0.059	-0.1593	No
74	Tk2	7279	-0.068	-0.1665	No
75	Gmpr2	7281	-0.068	-0.1646	No
76	Nudt21	7297	-0.069	-0.1637	No
77	Impdh2	7317	-0.070	-0.1632	No
78	Pola1	7334	-0.071	-0.1624	No
79	Xpc	7436	-0.078	-0.1682	No
80	Polr2h	7649	-0.092	-0.1827	No
81	Clp1	7804	-0.101	-0.1922	No
82	Polr2j	7841	-0.104	-0.1920	No
83	Ssrp1	8003	-0.116	-0.2017	No
84	Cetn2	8009	-0.116	-0.1986	No
85	Edf1	8058	-0.120	-0.1989	No
86	Dut	8168	-0.127	-0.2040	No
87	Prim1	8236	-0.131	-0.2055	No
88	Mpc2	8297	-0.135	-0.2064	No
89	Pold3	8346	-0.138	-0.2061	No
90	Dguok	8351	-0.139	-0.2023	No
91	Tyms	8395	-0.142	-0.2016	No
92	Nudt9	8433	-0.144	-0.2003	No
93	Gtf2a2	8476	-0.147	-0.1993	No
94	Polr2c	8507	-0.149	-0.1973	No
95	Rev3l	8726	-0.164	-0.2101	No
96	Eif1b	8777	-0.169	-0.2092	No
97	Vps28	8788	-0.170	-0.2049	No
98	Polh	8804	-0.171	-0.2010	No
99	Taf1c	8829	-0.173	-0.1978	No
100	Smad5	9130	-0.196	-0.2163	No
101	Aprt	9218	-0.202	-0.2173	No
102	Nt5c	9410	-0.216	-0.2264	No
103	Adrm1	9428	-0.217	-0.2213	No
104	Tarbp2	9714	-0.241	-0.2373	Yes
105	Umps	9727	-0.242	-0.2311	Yes
106	Taf10	9780	-0.245	-0.2280	Yes
107	Rnmt	9843	-0.250	-0.2255	Yes
108	Zfp707	9934	-0.257	-0.2252	Yes
109	Polb	9951	-0.259	-0.2188	Yes
110	Polr1d	10020	-0.265	-0.2164	Yes
111	Pold1	10217	-0.281	-0.2239	Yes
112	Polr2g	10279	-0.287	-0.2203	Yes
113	Nelfb	10414	-0.300	-0.2222	Yes
114	Polr2k	10509	-0.311	-0.2206	Yes
115	Mpg	10532	-0.314	-0.2130	Yes
116	Rfc2	10541	-0.315	-0.2043	Yes
117	Stx3	10825	-0.347	-0.2169	Yes
118	Rbx1	10900	-0.359	-0.2122	Yes
119	Rfc4	11004	-0.373	-0.2095	Yes
120	Snapc4	11074	-0.384	-0.2036	Yes
121	Pde4b	11109	-0.389	-0.1948	Yes
122	Dgcr8	11147	-0.395	-0.1860	Yes
123	Npr2	11412	-0.436	-0.1944	Yes
124	Rad52	11447	-0.442	-0.1840	Yes
125	Nelfe	11475	-0.446	-0.1729	Yes
126	Gtf3c5	11498	-0.450	-0.1612	Yes
127	Cmpk2	11518	-0.454	-0.1492	Yes
128	Supt4a	11589	-0.466	-0.1410	Yes
129	Taf13	11597	-0.467	-0.1276	Yes
130	Ell	11637	-0.478	-0.1165	Yes
131	Ercc1	11781	-0.504	-0.1131	Yes
132	Taf12	11829	-0.516	-0.1015	Yes
133	Gpx4	11950	-0.548	-0.0950	Yes
134	Tsg101	12040	-0.574	-0.0850	Yes
135	Pnp	12075	-0.587	-0.0703	Yes
136	Sdcbp	12134	-0.609	-0.0568	Yes
137	Ncbp2	12137	-0.613	-0.0387	Yes
138	Ago4	12217	-0.657	-0.0255	Yes
139	Polr3c	12282	-0.711	-0.0094	Yes
140	Rpa3	12322	-0.747	0.0097	Yes