Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group2.Mast_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.2375495
Normalized Enrichment Score (NES)	-0.99493665
Nominal p-value	0.45746693
FDR q-value	1.0
FWER p-Value	0.99

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Dpp4	166	0.729	0.0101	No
2	Psen1	442	0.581	0.0067	No
3	Ctsd	454	0.576	0.0245	No
4	Prep	504	0.558	0.0386	No
5	Ctsl	601	0.533	0.0480	No
6	Casp9	661	0.517	0.0600	No
7	Src	920	0.457	0.0539	No
8	Gp1ba	933	0.455	0.0677	No
9	Mmp14	942	0.454	0.0818	No
10	Rnf4	1058	0.433	0.0865	No
11	Plscr1	1404	0.382	0.0709	No
12	Cdk5r1	1683	0.345	0.0595	No
13	F8	1712	0.342	0.0683	No
14	Rce1	1780	0.334	0.0737	No
15	Timp2	1818	0.330	0.0814	No
16	Rhog	1884	0.320	0.0865	No
17	Gpd2	1988	0.310	0.0882	No
18	Serpinc1	2034	0.306	0.0944	No
19	Psmb9	2175	0.291	0.0925	No
20	Casp7	2216	0.288	0.0986	No
21	Akap10	2273	0.282	0.1032	No
22	Msrb1	2328	0.277	0.1078	No
23	Dusp5	2424	0.269	0.1088	No
24	Cpq	2455	0.267	0.1150	No
25	Zeb1	2566	0.256	0.1144	No
26	Ctso	2790	0.238	0.1040	No
27	Lyn	2944	0.224	0.0989	No
28	Usp8	2957	0.223	0.1051	No
29	Phex	2974	0.222	0.1110	No
30	Ppp2cb	3012	0.219	0.1151	No
31	Kcnip2	3046	0.217	0.1195	No
32	S100a13	3127	0.211	0.1199	No
33	Dock4	3178	0.207	0.1225	No
34	Lta4h	3214	0.205	0.1263	No
35	C3	3430	0.188	0.1150	No
36	Gata3	3436	0.188	0.1206	No
37	Csrp1	3467	0.184	0.1242	No
38	Usp14	3483	0.183	0.1289	No
39	Hspa5	3523	0.181	0.1316	No
40	Cr2	3600	0.175	0.1311	No
41	Rabif	3765	0.164	0.1231	No
42	Cd46	4241	0.130	0.0888	No
43	Ehd1	4303	0.126	0.0879	No
44	Dusp6	4634	0.106	0.0646	No
45	Pik3cg	4741	0.098	0.0592	No
46	Was	4774	0.096	0.0597	No
47	Fyn	5115	0.073	0.0345	No
48	Kif2a	5204	0.067	0.0295	No
49	Irf7	5247	0.065	0.0282	No
50	Gnai2	5281	0.062	0.0275	No
51	Prdm4	5358	0.057	0.0232	No
52	Pfn1	5526	0.045	0.0111	No
53	Cblb	5570	0.043	0.0090	No
54	Prcp	5702	0.033	-0.0005	No
55	Grb2	6017	0.013	-0.0256	No
56	S100a9	6218	0.000	-0.0418	No
57	Stx4a	6238	-0.001	-0.0433	No
58	Itgam	6425	-0.012	-0.0580	No
59	Car2	6561	-0.023	-0.0682	No
60	Atox1	6697	-0.030	-0.0782	No
61	Prkcd	6752	-0.033	-0.0815	No
62	Calm1	6864	-0.038	-0.0893	No
63	Plaur	7135	-0.057	-0.1093	No
64	Lamp2	7201	-0.062	-0.1126	No
65	Ctsc	7248	-0.065	-0.1142	No
66	Dock9	7344	-0.072	-0.1196	No
67	Brpf3	7416	-0.077	-0.1229	No
68	Sirt6	7513	-0.084	-0.1280	No
69	C2	7575	-0.088	-0.1301	No
70	Kcnip3	7898	-0.108	-0.1527	No
71	Usp15	7905	-0.108	-0.1497	No
72	Dock10	7920	-0.110	-0.1472	No
73	Gnb2	8063	-0.120	-0.1549	No
74	Gmfb	8099	-0.123	-0.1537	No
75	Pla2g4a	8145	-0.126	-0.1533	No
76	Gca	8335	-0.137	-0.1642	No
77	Casp4	8475	-0.147	-0.1707	No
78	Rasgrp1	8700	-0.162	-0.1836	No
79	Irf1	9152	-0.197	-0.2138	No
80	Pim1	9266	-0.206	-0.2163	No
81	Gnai3	9408	-0.216	-0.2208	No
82	Fcer1g	9514	-0.225	-0.2220	No
83	Gngt2	9562	-0.229	-0.2184	No
84	Pik3ca	9677	-0.237	-0.2199	No
85	Calm3	9696	-0.238	-0.2137	No
86	Gng2	9735	-0.243	-0.2089	No
87	Il6	9962	-0.260	-0.2188	No
88	Lgals3	10194	-0.279	-0.2285	Yes
89	Adam9	10261	-0.285	-0.2246	Yes
90	Fdx1	10272	-0.287	-0.2161	Yes
91	Vcpip1	10325	-0.291	-0.2109	Yes
92	Irf2	10416	-0.300	-0.2085	Yes
93	Jak2	10625	-0.325	-0.2148	Yes
94	Ppp4c	10690	-0.331	-0.2093	Yes
95	Anxa5	10778	-0.341	-0.2053	Yes
96	Gnb4	10788	-0.343	-0.1949	Yes
97	Xpnpep1	10858	-0.352	-0.1891	Yes
98	Pik3r5	11006	-0.374	-0.1889	Yes
99	Tnfaip3	11225	-0.407	-0.1934	Yes
100	Casp3	11272	-0.413	-0.1838	Yes
101	Sh2b3	11336	-0.424	-0.1751	Yes
102	Plek	11435	-0.440	-0.1688	Yes
103	Ctsb	11507	-0.451	-0.1600	Yes
104	Gzmb	11514	-0.453	-0.1458	Yes
105	Lipa	11540	-0.458	-0.1330	Yes
106	Dgkg	11555	-0.460	-0.1192	Yes
107	Casp1	11652	-0.480	-0.1114	Yes
108	Cdh13	11668	-0.482	-0.0970	Yes
109	Spock2	11719	-0.491	-0.0851	Yes
110	Pdp1	11724	-0.492	-0.0695	Yes
111	Dyrk2	11726	-0.492	-0.0537	Yes
112	Raf1	11983	-0.558	-0.0563	Yes
113	Lcp2	12079	-0.589	-0.0450	Yes
114	Rbsn	12256	-0.684	-0.0371	Yes
115	Lap3	12352	-0.784	-0.0194	Yes
116	Usp16	12371	-0.818	0.0057	Yes