Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group2.Mast_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.21578464
Normalized Enrichment Score (NES)	-1.0008692
Nominal p-value	0.4413519
FDR q-value	1.0
FWER p-Value	0.99

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ddit3	307	0.632	-0.0030	No
2	Psen1	442	0.581	0.0062	No
3	Jun	479	0.566	0.0229	No
4	Cd44	634	0.522	0.0285	No
5	Mgmt	647	0.520	0.0456	No
6	Casp9	661	0.517	0.0624	No
7	Gsr	812	0.480	0.0669	No
8	Sod1	831	0.477	0.0819	No
9	Cdkn1b	834	0.476	0.0983	No
10	Ccnd2	1076	0.430	0.0936	No
11	Rhob	1139	0.420	0.1031	No
12	Ebp	1331	0.390	0.1011	No
13	Timp2	1818	0.330	0.0731	No
14	Tspo	1835	0.327	0.0831	No
15	Rara	1896	0.319	0.0893	No
16	Pdgfrb	2050	0.305	0.0874	No
17	Gsn	2192	0.290	0.0860	No
18	Casp7	2216	0.288	0.0942	No
19	Anxa1	2369	0.274	0.0913	No
20	Pea15a	2427	0.269	0.0960	No
21	Hmgb2	2436	0.268	0.1046	No
22	Bid	2476	0.264	0.1106	No
23	Top2a	2551	0.257	0.1135	No
24	Ptk2	2792	0.238	0.1023	No
25	Cdk2	2816	0.235	0.1086	No
26	Tgfb2	2818	0.235	0.1166	No
27	Ppt1	2979	0.222	0.1113	No
28	Rock1	3035	0.218	0.1144	No
29	App	3041	0.217	0.1215	No
30	Brca1	3148	0.209	0.1202	No
31	Ifngr1	3490	0.183	0.0988	No
32	Satb1	3921	0.153	0.0692	No
33	Txnip	4171	0.136	0.0537	No
34	Igf2r	4331	0.124	0.0451	No
35	Tap1	4395	0.121	0.0442	No
36	Rela	4459	0.116	0.0431	No
37	Ifitm3	4467	0.115	0.0465	No
38	Plcb2	4543	0.110	0.0443	No
39	Nefh	4596	0.107	0.0438	No
40	Cflar	4674	0.103	0.0411	No
41	Hgf	4691	0.102	0.0433	No
42	Bcl2l1	4731	0.099	0.0436	No
43	Diablo	4737	0.098	0.0466	No
44	Timp3	4875	0.090	0.0386	No
45	Gna15	4945	0.084	0.0359	No
46	Mcl1	5079	0.074	0.0277	No
47	Btg2	5323	0.060	0.0101	No
48	Cyld	5386	0.056	0.0070	No
49	Ctnnb1	5739	0.030	-0.0205	No
50	Smad7	5997	0.015	-0.0409	No
51	Casp8	6003	0.014	-0.0408	No
52	Rnasel	6209	0.000	-0.0574	No
53	Ier3	6276	-0.004	-0.0627	No
54	Wee1	6290	-0.005	-0.0635	No
55	Dnajc3	6307	-0.006	-0.0646	No
56	Ppp2r5b	6333	-0.008	-0.0664	No
57	Bcap31	6499	-0.018	-0.0791	No
58	Bmf	6506	-0.018	-0.0790	No
59	Tgfbr3	6633	-0.027	-0.0883	No
60	Bcl2l2	6698	-0.030	-0.0925	No
61	H1f0	6770	-0.034	-0.0971	No
62	Cdc25b	6903	-0.041	-0.1064	No
63	Tnf	7183	-0.061	-0.1269	No
64	Vdac2	7196	-0.062	-0.1257	No
65	Madd	7326	-0.070	-0.1338	No
66	Birc3	7418	-0.077	-0.1385	No
67	Krt18	7601	-0.090	-0.1502	No
68	Crebbp	7606	-0.090	-0.1474	No
69	Isg20	7740	-0.098	-0.1548	No
70	Add1	7754	-0.099	-0.1524	No
71	Gch1	7796	-0.100	-0.1523	No
72	Pdcd4	7937	-0.111	-0.1598	No
73	Cdkn1a	8279	-0.134	-0.1828	No
74	Gadd45a	8391	-0.142	-0.1869	No
75	Casp2	8402	-0.142	-0.1828	No
76	Il18	8455	-0.146	-0.1819	No
77	Sqstm1	8461	-0.146	-0.1773	No
78	Casp4	8475	-0.147	-0.1733	No
79	Bax	8556	-0.152	-0.1745	No
80	Dnm1l	9027	-0.188	-0.2061	No
81	Psen2	9053	-0.190	-0.2015	No
82	Irf1	9152	-0.197	-0.2026	No
83	Prf1	9164	-0.198	-0.1967	No
84	Etf1	9171	-0.199	-0.1903	No
85	Mmp2	9303	-0.208	-0.1937	No
86	Pak1	9350	-0.212	-0.1901	No
87	F2r	9481	-0.221	-0.1930	No
88	Lmna	9566	-0.229	-0.1919	No
89	Gpx1	9835	-0.250	-0.2050	No
90	Il6	9962	-0.260	-0.2062	Yes
91	Sptan1	9979	-0.261	-0.1984	Yes
92	Lgals3	10194	-0.279	-0.2061	Yes
93	Sod2	10227	-0.282	-0.1990	Yes
94	Bcl10	10274	-0.287	-0.1928	Yes
95	Dap	10378	-0.296	-0.1909	Yes
96	Casp6	10426	-0.301	-0.1842	Yes
97	Rhot2	10449	-0.303	-0.1755	Yes
98	Dap3	10499	-0.309	-0.1688	Yes
99	Retsat	10627	-0.325	-0.1679	Yes
100	Fdxr	10728	-0.335	-0.1644	Yes
101	Bnip3l	10789	-0.343	-0.1574	Yes
102	Dnaja1	10819	-0.347	-0.1477	Yes
103	Btg3	10951	-0.365	-0.1457	Yes
104	Ppp3r1	11070	-0.383	-0.1420	Yes
105	Erbb3	11133	-0.393	-0.1334	Yes
106	Cd69	11223	-0.407	-0.1266	Yes
107	Casp3	11272	-0.413	-0.1162	Yes
108	Dffa	11367	-0.429	-0.1089	Yes
109	Xiap	11481	-0.447	-0.1026	Yes
110	Casp1	11652	-0.480	-0.0998	Yes
111	Sc5d	11675	-0.483	-0.0848	Yes
112	Ank	11837	-0.517	-0.0800	Yes
113	Sat1	11874	-0.526	-0.0647	Yes
114	Nedd9	11905	-0.534	-0.0486	Yes
115	Gpx4	11950	-0.548	-0.0332	Yes
116	Slc20a1	11965	-0.551	-0.0153	Yes
117	Tnfsf10	12304	-0.726	-0.0176	Yes
118	Bcl2l11	12374	-0.827	0.0054	Yes