Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	Mast.Mast_Pheno.cls #Group1_versus_Group2.Mast_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Mast_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	0
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.20178223
Normalized Enrichment Score (NES)	0.85680693
Nominal p-value	0.7340206
FDR q-value	0.9418703
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Baiap2	11	1.111	0.0378	Yes
2	Gtf2f1	72	0.849	0.0624	Yes
3	B4galt1	214	0.698	0.0753	Yes
4	Rac2	281	0.652	0.0926	Yes
5	Inppl1	357	0.611	0.1078	Yes
6	Lamb3	462	0.573	0.1193	Yes
7	Tspan4	552	0.547	0.1311	Yes
8	Vcan	737	0.497	0.1335	Yes
9	Pbx2	760	0.490	0.1487	Yes
10	Vwf	801	0.482	0.1623	Yes
11	Itgb4	870	0.468	0.1730	Yes
12	Src	920	0.457	0.1850	Yes
13	Mpzl1	972	0.449	0.1965	Yes
14	Nrap	1091	0.428	0.2018	Yes
15	Nlgn2	1355	0.388	0.1939	No
16	Pard6g	1723	0.341	0.1761	No
17	Nectin1	1863	0.323	0.1760	No
18	Sympk	2098	0.299	0.1675	No
19	Map3k20	2114	0.298	0.1766	No
20	Actn1	2351	0.275	0.1671	No
21	Sirpa	2719	0.244	0.1458	No
22	Pik3cb	2728	0.243	0.1536	No
23	Ptk2	2792	0.238	0.1568	No
24	Pten	2860	0.231	0.1594	No
25	Nlgn3	2872	0.230	0.1665	No
26	Dlg1	2917	0.226	0.1708	No
27	Cercam	3053	0.217	0.1674	No
28	Vav2	3368	0.192	0.1486	No
29	Itga2	3401	0.190	0.1526	No
30	Pkd1	3413	0.189	0.1583	No
31	Vcl	3568	0.177	0.1520	No
32	Tial1	3698	0.169	0.1474	No
33	Nectin4	3737	0.167	0.1501	No
34	Taok2	3755	0.165	0.1545	No
35	Tsc1	4047	0.144	0.1359	No
36	Actg1	4052	0.143	0.1406	No
37	Evl	4319	0.125	0.1234	No
38	Cap1	4417	0.119	0.1196	No
39	Actn4	4597	0.107	0.1088	No
40	Skap2	4823	0.093	0.0938	No
41	Ikbkg	4932	0.086	0.0881	No
42	Myh9	5085	0.074	0.0783	No
43	Icam1	5130	0.072	0.0773	No
44	Gnai2	5281	0.062	0.0672	No
45	Icam4	5334	0.059	0.0651	No
46	Pals1	5374	0.056	0.0639	No
47	Mapk14	5467	0.049	0.0581	No
48	Exoc4	5499	0.047	0.0572	No
49	Pfn1	5526	0.045	0.0567	No
50	Crat	5655	0.036	0.0476	No
51	Amigo2	5722	0.032	0.0433	No
52	Stx4a	6238	-0.001	0.0016	No
53	Icam2	6266	-0.003	-0.0005	No
54	Ctnnd1	6393	-0.011	-0.0103	No
55	Dhx16	6493	-0.017	-0.0177	No
56	Hras	6537	-0.021	-0.0205	No
57	Syk	6540	-0.021	-0.0199	No
58	Icam5	6598	-0.024	-0.0237	No
59	Cdh1	6651	-0.027	-0.0270	No
60	Bmp1	6751	-0.033	-0.0339	No
61	Itgb1	6753	-0.033	-0.0328	No
62	Cadm2	6852	-0.038	-0.0394	No
63	Arpc2	6940	-0.044	-0.0450	No
64	Nectin2	7004	-0.048	-0.0484	No
65	Sgce	7243	-0.065	-0.0654	No
66	Insig1	7304	-0.069	-0.0679	No
67	Ptprc	7506	-0.083	-0.0813	No
68	Myl12b	7519	-0.085	-0.0793	No
69	Msn	7788	-0.100	-0.0976	No
70	Pecam1	7904	-0.108	-0.1031	No
71	Ywhah	8029	-0.118	-0.1091	No
72	Rsu1	8072	-0.121	-0.1083	No
73	Adam15	8199	-0.129	-0.1140	No
74	Akt2	8313	-0.136	-0.1184	No
75	Map4k2	8420	-0.143	-0.1220	No
76	Ldlrap1	8438	-0.145	-0.1184	No
77	Nf1	8583	-0.155	-0.1247	No
78	Itga10	8612	-0.156	-0.1215	No
79	Cd34	8705	-0.162	-0.1233	No
80	Jup	8827	-0.173	-0.1271	No
81	Wasl	8896	-0.178	-0.1264	No
82	Pik3r3	9031	-0.189	-0.1307	No
83	Rasa1	9253	-0.204	-0.1415	No
84	Mmp2	9303	-0.208	-0.1383	No
85	Vasp	9343	-0.211	-0.1341	No
86	Actb	9525	-0.225	-0.1409	No
87	Ctnna1	9545	-0.227	-0.1346	No
88	Tubg1	9783	-0.246	-0.1452	No
89	Rhof	10161	-0.277	-0.1662	No
90	Shc1	10165	-0.277	-0.1568	No
91	Plcg1	10196	-0.279	-0.1495	No
92	Adam9	10261	-0.285	-0.1448	No
93	Myh10	10462	-0.304	-0.1504	No
94	Lima1	10467	-0.305	-0.1401	No
95	Hadh	10729	-0.335	-0.1496	No
96	Sorbs3	10770	-0.340	-0.1410	No
97	Zyx	10905	-0.360	-0.1394	No
98	Layn	11068	-0.383	-0.1392	No
99	Cnn2	11108	-0.389	-0.1289	No
100	Epb41l2	11174	-0.400	-0.1202	No
101	Fbn1	11205	-0.404	-0.1086	No
102	Atp1a3	11254	-0.411	-0.0982	No
103	Tmem8b	11627	-0.476	-0.1118	No
104	Itga9	11648	-0.479	-0.0968	No
105	Nf2	11649	-0.480	-0.0801	No
106	Akt3	11825	-0.515	-0.0763	No
107	Cd274	11889	-0.530	-0.0630	No
108	Amigo1	12006	-0.565	-0.0528	No
109	Cdk8	12103	-0.598	-0.0398	No
110	Arhgef6	12163	-0.625	-0.0228	No
111	Cd86	12165	-0.627	-0.0011	No
112	Tjp1	12236	-0.672	0.0166	No