Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group6_versus_Group8.MPP_Pheno.cls#Group6_versus_Group8_repos
Phenotype	MPP_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.2826871
Normalized Enrichment Score (NES)	-1.2890083
Nominal p-value	0.09883721
FDR q-value	0.3612585
FWER p-Value	0.832

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ddb2	164	0.784	0.0156	No
2	Npr2	373	0.646	0.0247	No
3	Dut	1143	0.475	-0.0004	No
4	Gsdme	1438	0.438	-0.0021	No
5	Adcy6	1801	0.419	-0.0079	No
6	Fen1	1953	0.408	-0.0031	No
7	Polr1c	1989	0.403	0.0074	No
8	Brf2	2042	0.395	0.0169	No
9	Dguok	2185	0.379	0.0212	No
10	Pom121	2219	0.374	0.0310	No
11	Gtf3c5	2634	0.334	0.0199	No
12	Nelfcd	2818	0.318	0.0202	No
13	Poll	3419	0.279	-0.0022	No
14	Ercc2	3602	0.271	-0.0033	No
15	Pold1	3630	0.269	0.0036	No
16	Ercc1	3657	0.267	0.0105	No
17	Polr2a	3675	0.266	0.0178	No
18	Vps28	3809	0.261	0.0189	No
19	Polr2h	3854	0.258	0.0246	No
20	Polh	3944	0.253	0.0278	No
21	Rfc3	4124	0.251	0.0262	No
22	Ada	4234	0.248	0.0282	No
23	Ercc8	4363	0.240	0.0290	No
24	Polr1h	4567	0.233	0.0257	No
25	Ell	4575	0.232	0.0325	No
26	Gtf2h1	4718	0.223	0.0320	No
27	Ssrp1	4964	0.209	0.0258	No
28	Pde4b	5041	0.204	0.0281	No
29	Mpg	5459	0.181	0.0122	No
30	Aaas	5564	0.176	0.0122	No
31	Dgcr8	5600	0.174	0.0158	No
32	Ercc4	5667	0.171	0.0177	No
33	Gtf2f1	5921	0.160	0.0095	No
34	Rad52	6221	0.145	-0.0015	No
35	Polr3gl	6279	0.142	-0.0001	No
36	Pcna	6321	0.140	0.0021	No
37	Pola1	6361	0.138	0.0043	No
38	Pole4	6574	0.128	-0.0027	No
39	Pnp	6700	0.122	-0.0054	No
40	Umps	7062	0.107	-0.0207	No
41	Prim1	7165	0.102	-0.0229	No
42	Rev3l	7179	0.102	-0.0204	No
43	Eloa	7214	0.100	-0.0191	No
44	Polr2f	7293	0.097	-0.0201	No
45	Pola2	7351	0.094	-0.0202	No
46	Eif1b	7622	0.084	-0.0316	No
47	Nt5c3	7738	0.080	-0.0350	No
48	Smad5	7781	0.078	-0.0348	No
49	Ddb1	7793	0.077	-0.0330	No
50	Ercc3	7875	0.073	-0.0350	No
51	Snapc5	8080	0.066	-0.0435	No
52	Mrpl40	8215	0.060	-0.0485	No
53	Edf1	8273	0.058	-0.0497	No
54	Lig1	8447	0.053	-0.0570	No
55	Alyref	8534	0.049	-0.0599	No
56	Rfc2	8576	0.048	-0.0606	No
57	Cetn2	8972	0.032	-0.0800	No
58	Polr2j	9133	0.026	-0.0874	No
59	Sdcbp	9277	0.020	-0.0942	No
60	Adrm1	9396	0.016	-0.0998	No
61	Supt4a	9542	0.011	-0.1069	No
62	Ercc5	9656	0.006	-0.1126	No
63	Snapc4	10233	-0.002	-0.1423	No
64	Pold3	10388	-0.007	-0.1500	No
65	Rad51	10430	-0.009	-0.1518	No
66	Gtf2a2	10771	-0.019	-0.1688	No
67	Zfp707	11089	-0.032	-0.1842	No
68	Guk1	11340	-0.041	-0.1959	No
69	Polr1d	11497	-0.046	-0.2025	No
70	Rpa2	11502	-0.046	-0.2013	No
71	Xpc	11521	-0.047	-0.2008	No
72	Rnmt	11617	-0.050	-0.2041	No
73	Supt5	11641	-0.051	-0.2038	No
74	Clp1	11755	-0.056	-0.2079	No
75	Nfx1	11836	-0.059	-0.2102	No
76	Taf6	12037	-0.068	-0.2185	No
77	Nme3	12087	-0.069	-0.2189	No
78	Polr2c	12094	-0.070	-0.2170	No
79	Tyms	12125	-0.071	-0.2164	No
80	Itpa	12148	-0.072	-0.2153	No
81	Pde6g	12373	-0.079	-0.2244	No
82	Tk2	12782	-0.095	-0.2426	No
83	Dad1	12837	-0.097	-0.2424	No
84	Rfc5	12845	-0.098	-0.2397	No
85	Sf3a3	12868	-0.099	-0.2378	No
86	Rfc4	12889	-0.100	-0.2358	No
87	Cstf3	13292	-0.115	-0.2530	No
88	Polb	13682	-0.133	-0.2690	No
89	Ak1	13720	-0.134	-0.2668	No
90	Taf13	13778	-0.136	-0.2655	No
91	Rbx1	13874	-0.141	-0.2661	No
92	Ak3	14196	-0.155	-0.2779	Yes
93	Hcls1	14236	-0.157	-0.2751	Yes
94	Taf1c	14290	-0.160	-0.2729	Yes
95	Nudt21	14309	-0.160	-0.2689	Yes
96	Mpc2	14364	-0.163	-0.2667	Yes
97	Gtf2h3	14377	-0.164	-0.2623	Yes
98	Impdh2	14404	-0.165	-0.2586	Yes
99	Gtf2h5	14536	-0.171	-0.2601	Yes
100	Vps37b	14579	-0.173	-0.2569	Yes
101	Rala	14589	-0.174	-0.2520	Yes
102	Polr2d	14744	-0.181	-0.2544	Yes
103	Sac3d1	14998	-0.196	-0.2615	Yes
104	Sec61a1	15043	-0.198	-0.2577	Yes
105	Zwint	15059	-0.199	-0.2523	Yes
106	Trp53	15084	-0.201	-0.2474	Yes
107	Srsf6	15191	-0.206	-0.2465	Yes
108	Ncbp2	15406	-0.217	-0.2509	Yes
109	Bcap31	15480	-0.221	-0.2479	Yes
110	Taf9	15534	-0.224	-0.2437	Yes
111	Gmpr2	15697	-0.233	-0.2449	Yes
112	Nme1	15702	-0.233	-0.2380	Yes
113	Rrm2b	15815	-0.240	-0.2364	Yes
114	Stx3	16028	-0.252	-0.2396	Yes
115	Rpa3	16096	-0.257	-0.2352	Yes
116	Gpx4	16239	-0.266	-0.2343	Yes
117	Aprt	16259	-0.268	-0.2270	Yes
118	Dctn4	16501	-0.278	-0.2309	Yes
119	Ago4	16565	-0.284	-0.2255	Yes
120	Nelfb	16638	-0.288	-0.2203	Yes
121	Tsg101	16753	-0.296	-0.2171	Yes
122	Polr2k	16876	-0.302	-0.2141	Yes
123	Nelfe	16950	-0.308	-0.2084	Yes
124	Bcam	17421	-0.337	-0.2224	Yes
125	Rae1	17473	-0.341	-0.2145	Yes
126	Nudt9	17868	-0.376	-0.2233	Yes
127	Tarbp2	17912	-0.382	-0.2137	Yes
128	Cda	18069	-0.401	-0.2095	Yes
129	Usp11	18139	-0.410	-0.2004	Yes
130	Pold4	18338	-0.437	-0.1972	Yes
131	Upf3b	18374	-0.443	-0.1854	Yes
132	Taf12	18413	-0.448	-0.1736	Yes
133	Surf1	18450	-0.455	-0.1615	Yes
134	Polr3c	18470	-0.459	-0.1483	Yes
135	Polr2g	18538	-0.469	-0.1374	Yes
136	Polr2i	18632	-0.481	-0.1274	Yes
137	Cant1	18717	-0.498	-0.1164	Yes
138	Nt5c	18865	-0.524	-0.1079	Yes
139	Gtf2b	18883	-0.525	-0.0926	Yes
140	Polr2e	19037	-0.566	-0.0831	Yes
141	Arl6ip1	19073	-0.584	-0.0670	Yes
142	Taf10	19147	-0.610	-0.0520	Yes
143	Cmpk2	19233	-0.654	-0.0363	Yes
144	Cox17	19239	-0.656	-0.0164	Yes
145	Nme4	19489	-0.990	0.0012	Yes