Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group6_versus_Group8.MPP_Pheno.cls#Group6_versus_Group8_repos
Phenotype	MPP_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.2830571
Normalized Enrichment Score (NES)	-1.3261002
Nominal p-value	0.061181433
FDR q-value	0.39474142
FWER p-Value	0.783

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Rhot2	47	1.004	0.0295	No
2	Ccnd1	234	0.740	0.0434	No
3	Btg3	476	0.609	0.0503	No
4	Mcl1	800	0.553	0.0512	No
5	Igf2r	888	0.526	0.0634	No
6	Bcl2l2	1321	0.451	0.0555	No
7	Psen1	2302	0.366	0.0165	No
8	Sqstm1	2521	0.345	0.0162	No
9	Tnfrsf12a	2887	0.313	0.0073	No
10	Rela	2894	0.312	0.0169	No
11	Tnf	2908	0.312	0.0262	No
12	Bik	2915	0.311	0.0357	No
13	Etf1	2961	0.307	0.0432	No
14	Psen2	2990	0.305	0.0514	No
15	Gpx3	3023	0.303	0.0594	No
16	Pak1	3158	0.295	0.0618	No
17	Tgfbr3	3535	0.275	0.0512	No
18	Mgmt	3556	0.274	0.0588	No
19	Dcn	3706	0.264	0.0595	No
20	Ptk2	3823	0.260	0.0618	No
21	Bax	3881	0.256	0.0670	No
22	Sptan1	4030	0.252	0.0674	No
23	Isg20	4052	0.251	0.0743	No
24	Dnm1l	4365	0.240	0.0658	No
25	Anxa1	4379	0.239	0.0727	No
26	Casp7	4589	0.231	0.0693	No
27	Timp3	4699	0.224	0.0708	No
28	Casp9	4839	0.216	0.0705	No
29	Rara	4935	0.211	0.0723	No
30	Dnajc3	5098	0.201	0.0704	No
31	Timp2	5416	0.184	0.0598	No
32	Lef1	5706	0.170	0.0503	No
33	Jun	5804	0.164	0.0505	No
34	Birc3	6164	0.147	0.0367	No
35	Xiap	6180	0.147	0.0406	No
36	Add1	6412	0.136	0.0330	No
37	Clu	6437	0.135	0.0360	No
38	Dffa	6537	0.130	0.0350	No
39	Wee1	6707	0.121	0.0302	No
40	Nedd9	6809	0.118	0.0287	No
41	Dap3	6827	0.117	0.0315	No
42	Il18	6871	0.115	0.0330	No
43	Gsr	6962	0.111	0.0319	No
44	Brca1	6998	0.110	0.0336	No
45	Plcb2	7150	0.103	0.0290	No
46	Tnfsf10	7292	0.097	0.0248	No
47	Slc20a1	7917	0.072	-0.0051	No
48	Ctnnb1	8044	0.067	-0.0095	No
49	Cd38	8125	0.064	-0.0116	No
50	Sc5d	8291	0.058	-0.0182	No
51	Fez1	8300	0.057	-0.0168	No
52	Tspo	8664	0.044	-0.0342	No
53	Top2a	8677	0.044	-0.0334	No
54	Fas	8752	0.041	-0.0359	No
55	Mmp2	8832	0.038	-0.0388	No
56	Txnip	8915	0.035	-0.0419	No
57	Tgfb2	9017	0.030	-0.0462	No
58	Gstm2	9113	0.027	-0.0502	No
59	Sod2	9153	0.026	-0.0514	No
60	Rnasel	9228	0.022	-0.0545	No
61	Casp8	9353	0.018	-0.0603	No
62	Casp6	9605	0.008	-0.0730	No
63	App	9828	0.000	-0.0845	No
64	Cav1	9887	0.000	-0.0875	No
65	Atf3	10243	-0.003	-0.1057	No
66	Btg2	10271	-0.003	-0.1070	No
67	Ppp3r1	10324	-0.006	-0.1095	No
68	Cdk2	10366	-0.007	-0.1114	No
69	Pea15a	10431	-0.009	-0.1144	No
70	Bcl2l1	10565	-0.012	-0.1209	No
71	Sat1	10700	-0.016	-0.1273	No
72	Ccnd2	10731	-0.017	-0.1284	No
73	Cdkn1a	10951	-0.026	-0.1388	No
74	Cd44	10970	-0.027	-0.1389	No
75	Bnip3l	11001	-0.028	-0.1396	No
76	Ank	11109	-0.032	-0.1441	No
77	Rock1	11199	-0.035	-0.1475	No
78	H1f0	11654	-0.052	-0.1693	No
79	F2r	12212	-0.075	-0.1957	No
80	Fdxr	12267	-0.076	-0.1961	No
81	Ppp2r5b	12614	-0.088	-0.2111	No
82	Ppt1	12647	-0.089	-0.2099	No
83	Gna15	12672	-0.090	-0.2083	No
84	Bid	12779	-0.095	-0.2107	No
85	Casp1	13050	-0.106	-0.2213	No
86	Bmf	13233	-0.112	-0.2271	No
87	Irf1	13306	-0.116	-0.2272	No
88	Dnaja1	13397	-0.119	-0.2280	No
89	Bgn	13437	-0.121	-0.2262	No
90	Gch1	13584	-0.128	-0.2297	No
91	Cd69	13658	-0.131	-0.2293	No
92	Bcl2l11	14023	-0.146	-0.2434	No
93	Dpyd	14260	-0.158	-0.2505	No
94	Vdac2	14370	-0.163	-0.2510	No
95	Pmaip1	14916	-0.191	-0.2730	No
96	Sod1	15111	-0.202	-0.2766	Yes
97	Crebbp	15173	-0.205	-0.2733	Yes
98	Madd	15174	-0.205	-0.2668	Yes
99	Retsat	15197	-0.206	-0.2613	Yes
100	Krt18	15343	-0.214	-0.2620	Yes
101	Bcap31	15480	-0.221	-0.2621	Yes
102	Nefh	15685	-0.232	-0.2652	Yes
103	Erbb3	15686	-0.232	-0.2578	Yes
104	Ier3	15965	-0.249	-0.2643	Yes
105	Cflar	16011	-0.251	-0.2586	Yes
106	Cyld	16146	-0.260	-0.2573	Yes
107	Casp2	16149	-0.260	-0.2491	Yes
108	Cdc25b	16174	-0.262	-0.2420	Yes
109	Gpx4	16239	-0.266	-0.2369	Yes
110	Emp1	16590	-0.285	-0.2459	Yes
111	Smad7	16629	-0.288	-0.2387	Yes
112	Hmgb2	16710	-0.293	-0.2335	Yes
113	Rhob	16886	-0.302	-0.2329	Yes
114	Cdkn1b	17224	-0.324	-0.2400	Yes
115	Aifm3	17502	-0.345	-0.2434	Yes
116	Gadd45b	17546	-0.350	-0.2345	Yes
117	Diablo	17633	-0.356	-0.2276	Yes
118	Pdcd4	17728	-0.362	-0.2209	Yes
119	Tap1	17939	-0.385	-0.2195	Yes
120	Hgf	18188	-0.416	-0.2191	Yes
121	Casp3	18195	-0.417	-0.2061	Yes
122	Bcl10	18237	-0.423	-0.1948	Yes
123	Ifngr1	18316	-0.433	-0.1851	Yes
124	Pdgfrb	18390	-0.445	-0.1747	Yes
125	Hmox1	18451	-0.455	-0.1633	Yes
126	Gadd45a	18452	-0.455	-0.1489	Yes
127	Lmna	18668	-0.488	-0.1445	Yes
128	Casp4	18671	-0.488	-0.1291	Yes
129	Lgals3	18734	-0.501	-0.1164	Yes
130	Satb1	18851	-0.520	-0.1058	Yes
131	Dap	18923	-0.535	-0.0925	Yes
132	Gsn	19030	-0.565	-0.0800	Yes
133	Eno2	19165	-0.619	-0.0673	Yes
134	Gpx1	19199	-0.632	-0.0489	Yes
135	Ddit3	19218	-0.646	-0.0293	Yes
136	Ifitm3	19286	-0.688	-0.0109	Yes
137	Ebp	19324	-0.708	0.0097	Yes