Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group3_versus_Group4.MPP_Pheno.cls#Group3_versus_Group4_repos
Phenotype	MPP_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	-0.22805236
Normalized Enrichment Score (NES)	-0.8661444
Nominal p-value	0.6507937
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Snn	46	0.960	0.0234	No
2	Olr1	47	0.956	0.0491	No
3	Ets2	225	0.733	0.0597	No
4	Tnfaip3	347	0.666	0.0713	No
5	Marcks	352	0.664	0.0890	No
6	Cd69	512	0.604	0.0970	No
7	Ccnd1	542	0.592	0.1114	No
8	Dusp4	903	0.505	0.1063	No
9	Mxd1	1068	0.474	0.1106	No
10	Klf4	1143	0.462	0.1192	No
11	Fosl1	1215	0.451	0.1276	No
12	Plau	1439	0.422	0.1274	No
13	Ier5	1510	0.415	0.1349	No
14	Cxcl10	1694	0.393	0.1360	No
15	Cd83	1846	0.378	0.1384	No
16	Icosl	1931	0.370	0.1439	No
17	Il6st	2119	0.354	0.1438	No
18	B4galt5	2286	0.340	0.1444	No
19	Litaf	2695	0.308	0.1315	No
20	Il15ra	2773	0.302	0.1357	No
21	Panx1	3270	0.269	0.1173	No
22	Cd80	3280	0.268	0.1240	No
23	Atf3	3287	0.268	0.1309	No
24	G0s2	3486	0.258	0.1276	No
25	Id2	3660	0.249	0.1254	No
26	Relb	4185	0.220	0.1042	No
27	Traf1	4271	0.217	0.1056	No
28	Slc2a3	4310	0.215	0.1094	No
29	Gadd45a	4446	0.207	0.1080	No
30	Btg3	4490	0.205	0.1113	No
31	Icam1	4737	0.191	0.1037	No
32	Gem	4773	0.189	0.1070	No
33	Gch1	4958	0.180	0.1023	No
34	Tnip1	5028	0.176	0.1035	No
35	Plek	5161	0.169	0.1012	No
36	Klf6	5185	0.168	0.1045	No
37	Ier3	5223	0.166	0.1071	No
38	Klf2	5316	0.162	0.1067	No
39	Zc3h12a	5465	0.156	0.1032	No
40	Ldlr	5632	0.149	0.0986	No
41	Slc16a6	5748	0.147	0.0966	No
42	Plaur	5772	0.145	0.0993	No
43	Ifngr2	6171	0.127	0.0822	No
44	Fut4	6232	0.124	0.0824	No
45	Cdkn1a	6269	0.122	0.0838	No
46	Rcan1	6455	0.115	0.0773	No
47	Clcf1	6464	0.115	0.0800	No
48	Rnf19b	6472	0.114	0.0827	No
49	Lamb3	6679	0.106	0.0749	No
50	Nfkbie	6689	0.106	0.0773	No
51	Fos	6904	0.097	0.0688	No
52	Nfkb1	6934	0.096	0.0699	No
53	Irf1	7013	0.093	0.0684	No
54	Rel	7016	0.093	0.0708	No
55	Zfp36	7393	0.079	0.0535	No
56	Gpr183	7421	0.078	0.0542	No
57	Tiparp	7459	0.077	0.0544	No
58	Maff	7629	0.072	0.0476	No
59	Plk2	7943	0.060	0.0330	No
60	Cflar	7970	0.059	0.0333	No
61	Trip10	8000	0.058	0.0333	No
62	Sphk1	8060	0.056	0.0318	No
63	Atp2b1	8208	0.051	0.0256	No
64	Tank	8229	0.050	0.0259	No
65	Tnf	8256	0.049	0.0259	No
66	Dennd5a	8432	0.042	0.0180	No
67	Cd44	8439	0.042	0.0188	No
68	Rela	8565	0.037	0.0133	No
69	Phlda1	8695	0.033	0.0075	No
70	Fosb	8725	0.032	0.0069	No
71	B4galt1	8998	0.022	-0.0066	No
72	Pnrc1	9323	0.011	-0.0231	No
73	Jun	9351	0.010	-0.0242	No
74	Tnfaip2	9391	0.009	-0.0260	No
75	Smad3	9478	0.006	-0.0302	No
76	Myc	9550	0.004	-0.0338	No
77	Nfkbia	9579	0.003	-0.0352	No
78	Btg2	9675	0.001	-0.0401	No
79	Lif	9704	0.000	-0.0415	No
80	Junb	10247	-0.017	-0.0691	No
81	Ptpre	10355	-0.020	-0.0741	No
82	Pmepa1	10358	-0.020	-0.0736	No
83	Egr1	10458	-0.024	-0.0781	No
84	Jag1	10909	-0.041	-0.1003	No
85	Nampt	10926	-0.041	-0.1000	No
86	Mcl1	10951	-0.042	-0.1001	No
87	Ripk2	11001	-0.044	-0.1014	No
88	Kynu	11015	-0.044	-0.1009	No
89	Nfe2l2	11173	-0.050	-0.1077	No
90	Birc3	11357	-0.056	-0.1156	No
91	Pdlim5	11456	-0.059	-0.1191	No
92	Yrdc	11503	-0.061	-0.1198	No
93	Csf1	11596	-0.064	-0.1229	No
94	Kdm6b	11604	-0.064	-0.1215	No
95	Phlda2	11756	-0.067	-0.1275	No
96	Dnajb4	11832	-0.070	-0.1295	No
97	Birc2	11921	-0.073	-0.1321	No
98	Eif1	11954	-0.074	-0.1317	No
99	Gadd45b	11976	-0.075	-0.1308	No
100	Cebpd	12028	-0.077	-0.1313	No
101	Ninj1	12032	-0.077	-0.1294	No
102	Bcl3	12115	-0.080	-0.1315	No
103	Ptger4	12128	-0.081	-0.1300	No
104	Dusp2	12309	-0.086	-0.1369	No
105	Ccnl1	12399	-0.090	-0.1391	No
106	Tlr2	12461	-0.092	-0.1398	No
107	Bcl6	12507	-0.093	-0.1396	No
108	Tnfsf9	12705	-0.100	-0.1471	No
109	Irs2	12712	-0.100	-0.1447	No
110	Klf9	12858	-0.105	-0.1494	No
111	Vegfa	13218	-0.120	-0.1647	No
112	Stat5a	13436	-0.128	-0.1725	No
113	Hes1	13693	-0.138	-0.1820	No
114	Nfkb2	13761	-0.141	-0.1817	No
115	Plpp3	13788	-0.142	-0.1792	No
116	Dusp5	13829	-0.142	-0.1775	No
117	Nfat5	13863	-0.144	-0.1753	No
118	Pde4b	13900	-0.145	-0.1733	No
119	Ifit2	14029	-0.150	-0.1759	No
120	Ier2	14155	-0.155	-0.1782	No
121	Tubb2a	14200	-0.156	-0.1763	No
122	Fosl2	14225	-0.157	-0.1733	No
123	Ehd1	14879	-0.183	-0.2021	No
124	Tnip2	15000	-0.188	-0.2033	No
125	Ccl5	15335	-0.204	-0.2151	No
126	Tgif1	15377	-0.205	-0.2117	No
127	Il7r	15695	-0.222	-0.2221	Yes
128	Dram1	15696	-0.222	-0.2161	Yes
129	Tnfaip8	15814	-0.228	-0.2161	Yes
130	Nfil3	15943	-0.235	-0.2164	Yes
131	Sdc4	15998	-0.239	-0.2128	Yes
132	Map3k8	16251	-0.252	-0.2190	Yes
133	Sqstm1	16276	-0.254	-0.2134	Yes
134	Sat1	16378	-0.260	-0.2117	Yes
135	Cebpb	16458	-0.265	-0.2086	Yes
136	Gfpt2	16513	-0.269	-0.2042	Yes
137	Il18	16617	-0.275	-0.2021	Yes
138	Bhlhe40	16722	-0.281	-0.2000	Yes
139	Per1	16735	-0.282	-0.1930	Yes
140	Slc2a6	16776	-0.285	-0.1874	Yes
141	Nr4a1	17009	-0.301	-0.1913	Yes
142	Tsc22d1	17121	-0.308	-0.1888	Yes
143	Nr4a2	17257	-0.316	-0.1873	Yes
144	Zbtb10	17268	-0.317	-0.1793	Yes
145	Dusp1	17301	-0.319	-0.1724	Yes
146	Tap1	17413	-0.327	-0.1693	Yes
147	Sgk1	17428	-0.328	-0.1613	Yes
148	Pfkfb3	17594	-0.346	-0.1605	Yes
149	Sod2	17700	-0.354	-0.1564	Yes
150	Efna1	17870	-0.371	-0.1552	Yes
151	Rhob	17970	-0.383	-0.1500	Yes
152	Serpinb8	17993	-0.386	-0.1407	Yes
153	Fjx1	18129	-0.397	-0.1370	Yes
154	Tnfrsf9	18183	-0.404	-0.1289	Yes
155	Ptgs2	18328	-0.420	-0.1251	Yes
156	Klf10	18425	-0.431	-0.1185	Yes
157	Ifih1	18457	-0.436	-0.1084	Yes
158	Serpinb2	18583	-0.452	-0.1027	Yes
159	Hbegf	18595	-0.454	-0.0911	Yes
160	Ppp1r15a	18608	-0.456	-0.0794	Yes
161	Map2k3	18783	-0.487	-0.0753	Yes
162	Ccrl2	18793	-0.491	-0.0626	Yes
163	Socs3	18887	-0.509	-0.0537	Yes
164	Rigi	18971	-0.525	-0.0439	Yes
165	Trib1	18972	-0.525	-0.0298	Yes
166	Btg1	19296	-0.660	-0.0288	Yes
167	Spsb1	19358	-0.702	-0.0131	Yes
168	Abca1	19435	-0.782	0.0040	Yes