DatasetMPP.MPP_Pheno.cls#Group3_versus_Group4.MPP_Pheno.cls#Group3_versus_Group4_repos
PhenotypeMPP_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)0.22447482
Normalized Enrichment Score (NES)0.90711033
Nominal p-value0.57983196
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TGF_BETA_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Id18480.5120.0158Yes
2Ltbp29330.4990.0695Yes
3Ctnnb110360.4790.1199Yes
4Furin13280.4340.1553Yes
5Ppm1a18950.3730.1696Yes
6Fkbp1a33190.2670.1274Yes
7Xiap33380.2660.1574Yes
8Rhoa35190.2570.1779Yes
9Id236600.2490.1996Yes
10Bmpr1a41660.2210.1993Yes
11Sptbn144890.2050.2065Yes
12Cdh149530.1800.2037Yes
13Tjp149560.1800.2245Yes
14Cdk956360.1480.2068No
15Bcar359730.1360.2054No
16Ifngr261710.1270.2100No
17Smad661930.1260.2235No
18Apc81010.0550.1319No
19Tgfb185810.0370.1115No
20Slc20a188260.0280.1023No
21Bmpr290140.0220.0952No
22Map3k791320.0170.0912No
23Hdac194290.0080.0769No
24Smad394780.0060.0751No
25Ube2d395240.0050.0735No
26Junb10247-0.0170.0383No
27Pmepa110358-0.0200.0350No
28Smad110499-0.0260.0308No
29Ncor210689-0.0320.0247No
30Smurf210750-0.0340.0257No
31Arid4b10923-0.0410.0216No
32Hipk210996-0.0440.0230No
33Ski11115-0.0480.0225No
34Skil11278-0.0530.0204No
35Trim3311728-0.0670.0050No
36Tgfbr111893-0.0720.0050No
37Fnta11899-0.0730.0132No
38Smurf112146-0.0810.0100No
39Cdkn1c13005-0.112-0.0212No
40Ppp1ca13765-0.141-0.0438No
41Rab3113937-0.146-0.0356No
42Eng14111-0.153-0.0267No
43Acvr114434-0.166-0.0240No
44Tgif115377-0.205-0.0485No
45Smad717509-0.336-0.1190No
46Thbs118262-0.412-0.1098No
47Klf1018425-0.431-0.0681No
48Ppp1r15a18608-0.456-0.0246No
49Wwtr119217-0.6110.0152No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TGF_BETA_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TGF_BETA_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TGF_BETA_SIGNALING