DatasetMPP.MPP_Pheno.cls#Group3_versus_Group4.MPP_Pheno.cls#Group3_versus_Group4_repos
PhenotypeMPP_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.4184784
Normalized Enrichment Score (NES)-1.5561663
Nominal p-value0.041152265
FDR q-value0.24170606
FWER p-Value0.365
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1St3gal53270.678-0.0001No
2Tnfaip33470.6660.0155No
3Cd695120.6040.0220No
4Mvp12010.453-0.0023No
5Cxcl1016940.393-0.0180No
6Stat221360.352-0.0320No
7Fas26460.313-0.0505No
8Il15ra27730.302-0.0495No
9P2ry1430790.281-0.0583No
10Psmb932590.270-0.0609No
11Fcgr134870.258-0.0662No
12Bank135290.256-0.0619No
13Vamp536430.250-0.0616No
14Ube2l637590.243-0.0615No
15Vcam138400.238-0.0597No
16Hif1a40210.228-0.0634No
17Auts243010.215-0.0725No
18Icam147370.191-0.0902No
19Lysmd247720.189-0.0873No
20Irf248950.183-0.0890No
21Gch149580.180-0.0878No
22Itgb753100.162-0.1019No
23Pnp53880.159-0.1019No
24Arl4a54760.155-0.1026No
25Irf857380.147-0.1124No
26Isoc158000.144-0.1120No
27Psme262240.124-0.1308No
28Marchf162330.124-0.1281No
29Psmb262540.123-0.1261No
30Cd4062640.123-0.1235No
31Cdkn1a62690.122-0.1206No
32Stat165380.112-0.1317No
33Nfkb169340.096-0.1498No
34Ptpn269610.095-0.1487No
35Irf170130.093-0.1490No
36Casp373920.079-0.1666No
37Irf474180.079-0.1660No
38Cd7479770.059-0.1933No
39Sppl2a81560.053-0.2012No
40Trim2681680.052-0.2005No
41Gbp381900.052-0.2003No
42Slc25a2883530.045-0.2075No
43Cd27485490.038-0.2167No
44Irf586390.035-0.2204No
45Il10ra87630.030-0.2260No
46Lap388240.028-0.2284No
47Mthfd288340.028-0.2282No
48H2-DMa89920.023-0.2358No
49Pfkp89940.023-0.2352No
50Trim2190740.019-0.2388No
51Trim2593360.010-0.2521No
52Tnfaip293910.009-0.2547No
53Nfkbia95790.003-0.2642No
54Psma29972-0.007-0.2843No
55H2-Aa9997-0.008-0.2854No
56Helz210154-0.013-0.2931No
57Cmpk210196-0.015-0.2948No
58Adar10300-0.018-0.2997No
59Tapbp10511-0.026-0.3099No
60Nampt10926-0.041-0.3303No
61Pnpt110928-0.041-0.3293No
62Ripk211001-0.044-0.3320No
63Ifitm211202-0.051-0.3410No
64Casp811315-0.054-0.3455No
65St8sia411406-0.058-0.3487No
66Nlrc511733-0.067-0.3639No
67Epsti111796-0.069-0.3654No
68Psmb811871-0.072-0.3674No
69Cmtr112280-0.085-0.3864No
70Il712442-0.091-0.3924No
71Vamp812577-0.096-0.3970No
72Rapgef612680-0.099-0.3998No
73Samhd112833-0.105-0.4050No
74Il1513079-0.115-0.4149No
75Socs113088-0.115-0.4124No
76Casp113191-0.119-0.4147No
77Peli113205-0.119-0.4124No
78Nup9313232-0.120-0.4108No
79Parp1413337-0.124-0.4131No
80Tor1b13442-0.128-0.4153Yes
81Arid5b13461-0.129-0.4130Yes
82Pla2g4a13501-0.131-0.4118Yes
83Pml13540-0.133-0.4104Yes
84Rbck113623-0.135-0.4113Yes
85Samd9l13648-0.136-0.4092Yes
86Stat413662-0.137-0.4064Yes
87Ptpn613690-0.138-0.4044Yes
88Psma313852-0.143-0.4091Yes
89Myd8813853-0.143-0.4056Yes
90Pde4b13900-0.145-0.4044Yes
91Plscr113959-0.147-0.4037Yes
92Cfb13961-0.147-0.4001Yes
93Ifit214029-0.150-0.3998Yes
94Sp11014078-0.152-0.3985Yes
95Trafd114135-0.154-0.3976Yes
96Ifi3514198-0.156-0.3969Yes
97Ifnar214364-0.163-0.4014Yes
98Psmb1014388-0.164-0.3985Yes
99Casp714647-0.175-0.4075Yes
100Znfx114762-0.180-0.4089Yes
101Isg2014763-0.180-0.4045Yes
102B2m14769-0.180-0.4002Yes
103Nmi14890-0.183-0.4019Yes
104Wars114909-0.184-0.3982Yes
105Lats214949-0.185-0.3957Yes
106Cmklr114952-0.185-0.3911Yes
107Usp1814971-0.186-0.3875Yes
108Selp14994-0.187-0.3839Yes
109Psme115145-0.194-0.3869Yes
110Trim1415230-0.198-0.3863Yes
111Ccl515335-0.204-0.3866Yes
112Ripk115531-0.214-0.3914Yes
113Batf215546-0.214-0.3868Yes
114Ptpn115579-0.216-0.3831Yes
115Jak215746-0.224-0.3861Yes
116Zbp115832-0.229-0.3848Yes
117Irf715874-0.231-0.3812Yes
118Ifi3015967-0.237-0.3800Yes
119Bst215968-0.237-0.3741Yes
120Ly6e16030-0.240-0.3713Yes
121Dhx5816124-0.245-0.3701Yes
122Sri16190-0.250-0.3672Yes
123Fgl216397-0.261-0.3714Yes
124Oasl116487-0.267-0.3693Yes
125Rnf21316629-0.276-0.3698Yes
126Stat316677-0.279-0.3653Yes
127Cd3816724-0.281-0.3607Yes
128Il4ra16907-0.293-0.3628Yes
129Parp1216967-0.297-0.3585Yes
130Tnfsf1016985-0.299-0.3519Yes
131Ciita16987-0.299-0.3445Yes
132Eif2ak217007-0.300-0.3380Yes
133Rnf3117159-0.309-0.3382Yes
134Tap117413-0.327-0.3431Yes
135Nod117441-0.329-0.3363Yes
136Bpgm17546-0.341-0.3333Yes
137Ncoa317640-0.352-0.3293Yes
138Sod217700-0.354-0.3236Yes
139Ifitm317795-0.365-0.3194Yes
140Gpr1817841-0.370-0.3125Yes
141Cd8618189-0.404-0.3204Yes
142Ddx6018244-0.410-0.3130Yes
143Mx218248-0.411-0.3029Yes
144Pim118259-0.412-0.2932Yes
145Casp418308-0.417-0.2853Yes
146Ptgs218328-0.420-0.2759Yes
147Lgals3bp18355-0.424-0.2667Yes
148Sspn18385-0.426-0.2576Yes
149Ifih118457-0.436-0.2504Yes
150Rtp418490-0.440-0.2411Yes
151Rsad218542-0.447-0.2327Yes
152Lcp218576-0.451-0.2232Yes
153Ogfr18752-0.482-0.2202Yes
154Upp118787-0.490-0.2098Yes
155Eif4e318800-0.493-0.1982Yes
156Socs318887-0.509-0.1900Yes
157Il18bp18915-0.514-0.1787Yes
158Rigi18971-0.525-0.1685Yes
159Tdrd718990-0.527-0.1563Yes
160Ifit319012-0.533-0.1441Yes
161Ifi2719063-0.550-0.1330Yes
162Herc619074-0.555-0.1197Yes
163Xaf119164-0.588-0.1097Yes
164Irf919176-0.593-0.0956Yes
165Txnip19225-0.613-0.0828Yes
166Btg119296-0.660-0.0700Yes
167Oas319411-0.746-0.0574Yes
168Oas219425-0.765-0.0391Yes
169Ifi4419439-0.783-0.0203Yes
170Isg1519490-0.9660.0011Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE