| Dataset | MPP.MPP_Pheno.cls#Group3_versus_Group4.MPP_Pheno.cls#Group3_versus_Group4_repos |
| Phenotype | MPP_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_INFLAMMATORY_RESPONSE |
| Enrichment Score (ES) | -0.22718757 |
| Normalized Enrichment Score (NES) | -0.9010978 |
| Nominal p-value | 0.6150713 |
| FDR q-value | 1.0 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Olr1 | 47 | 0.956 | 0.0245 | No |
| 2 | Adora2b | 70 | 0.910 | 0.0489 | No |
| 3 | Cybb | 189 | 0.764 | 0.0643 | No |
| 4 | Rhog | 230 | 0.730 | 0.0828 | No |
| 5 | Sgms2 | 310 | 0.686 | 0.0980 | No |
| 6 | Gp1ba | 321 | 0.681 | 0.1166 | No |
| 7 | Nod2 | 502 | 0.606 | 0.1244 | No |
| 8 | Cd69 | 512 | 0.604 | 0.1409 | No |
| 9 | Rnf144b | 577 | 0.582 | 0.1540 | No |
| 10 | Il18r1 | 601 | 0.573 | 0.1689 | No |
| 11 | Il10 | 818 | 0.518 | 0.1723 | No |
| 12 | Tpbg | 861 | 0.511 | 0.1845 | No |
| 13 | Mxd1 | 1068 | 0.474 | 0.1872 | No |
| 14 | Slamf1 | 1224 | 0.450 | 0.1919 | No |
| 15 | Cxcl10 | 1694 | 0.393 | 0.1787 | No |
| 16 | Icosl | 1931 | 0.370 | 0.1769 | No |
| 17 | Cxcr6 | 2346 | 0.334 | 0.1649 | No |
| 18 | P2rx7 | 2657 | 0.312 | 0.1577 | No |
| 19 | Il15ra | 2773 | 0.302 | 0.1602 | No |
| 20 | Clec5a | 2990 | 0.287 | 0.1571 | No |
| 21 | Adgre1 | 3039 | 0.284 | 0.1626 | No |
| 22 | Lpar1 | 3099 | 0.280 | 0.1675 | No |
| 23 | Il18rap | 3274 | 0.269 | 0.1661 | No |
| 24 | Sema4d | 3647 | 0.250 | 0.1539 | No |
| 25 | Hif1a | 4021 | 0.228 | 0.1410 | No |
| 26 | Npffr2 | 4084 | 0.224 | 0.1441 | No |
| 27 | Tacr1 | 4226 | 0.218 | 0.1429 | No |
| 28 | Cd48 | 4605 | 0.199 | 0.1290 | No |
| 29 | Fzd5 | 4677 | 0.195 | 0.1309 | No |
| 30 | Icam1 | 4737 | 0.191 | 0.1332 | No |
| 31 | Atp2a2 | 4760 | 0.189 | 0.1374 | No |
| 32 | Slc28a2 | 4827 | 0.186 | 0.1392 | No |
| 33 | Gch1 | 4958 | 0.180 | 0.1376 | No |
| 34 | Klf6 | 5185 | 0.168 | 0.1306 | No |
| 35 | Ldlr | 5632 | 0.149 | 0.1118 | No |
| 36 | Plaur | 5772 | 0.145 | 0.1087 | No |
| 37 | Ifngr2 | 6171 | 0.127 | 0.0917 | No |
| 38 | Cd40 | 6264 | 0.123 | 0.0904 | No |
| 39 | Cdkn1a | 6269 | 0.122 | 0.0936 | No |
| 40 | Slc7a2 | 6490 | 0.114 | 0.0855 | No |
| 41 | P2ry2 | 6788 | 0.102 | 0.0730 | No |
| 42 | Psen1 | 6871 | 0.098 | 0.0715 | No |
| 43 | Slc7a1 | 6899 | 0.097 | 0.0728 | No |
| 44 | Nfkb1 | 6934 | 0.096 | 0.0738 | No |
| 45 | Adrm1 | 7008 | 0.094 | 0.0727 | No |
| 46 | Irf1 | 7013 | 0.093 | 0.0751 | No |
| 47 | Gabbr1 | 7069 | 0.091 | 0.0748 | No |
| 48 | Gpr183 | 7421 | 0.078 | 0.0589 | No |
| 49 | Pdpn | 7549 | 0.074 | 0.0544 | No |
| 50 | Gnai3 | 7649 | 0.071 | 0.0513 | No |
| 51 | Slc31a2 | 7742 | 0.068 | 0.0485 | No |
| 52 | Gna15 | 7768 | 0.067 | 0.0490 | No |
| 53 | Slc31a1 | 7827 | 0.064 | 0.0479 | No |
| 54 | Scn1b | 7852 | 0.064 | 0.0484 | No |
| 55 | Sphk1 | 8060 | 0.056 | 0.0393 | No |
| 56 | Nmur1 | 8161 | 0.053 | 0.0356 | No |
| 57 | Atp2b1 | 8208 | 0.051 | 0.0347 | No |
| 58 | Icam4 | 8369 | 0.045 | 0.0277 | No |
| 59 | Hpn | 8404 | 0.043 | 0.0271 | No |
| 60 | Pvr | 8450 | 0.041 | 0.0260 | No |
| 61 | Rela | 8565 | 0.037 | 0.0211 | No |
| 62 | Il10ra | 8763 | 0.030 | 0.0118 | No |
| 63 | Sele | 8899 | 0.026 | 0.0056 | No |
| 64 | Axl | 8917 | 0.025 | 0.0054 | No |
| 65 | Calcrl | 9159 | 0.017 | -0.0066 | No |
| 66 | Myc | 9550 | 0.004 | -0.0266 | No |
| 67 | Nfkbia | 9579 | 0.003 | -0.0280 | No |
| 68 | Btg2 | 9675 | 0.001 | -0.0329 | No |
| 69 | Lif | 9704 | 0.000 | -0.0343 | No |
| 70 | Kcna3 | 10035 | -0.009 | -0.0511 | No |
| 71 | Aqp9 | 10064 | -0.010 | -0.0523 | No |
| 72 | Ptpre | 10355 | -0.020 | -0.0667 | No |
| 73 | Tacr3 | 10437 | -0.023 | -0.0702 | No |
| 74 | Tapbp | 10511 | -0.026 | -0.0732 | No |
| 75 | Kcnj2 | 10564 | -0.028 | -0.0751 | No |
| 76 | Cd82 | 10630 | -0.030 | -0.0777 | No |
| 77 | Ffar2 | 10678 | -0.031 | -0.0792 | No |
| 78 | Itga5 | 10692 | -0.032 | -0.0790 | No |
| 79 | Abi1 | 10738 | -0.034 | -0.0804 | No |
| 80 | Mmp14 | 10823 | -0.037 | -0.0837 | No |
| 81 | Nampt | 10926 | -0.041 | -0.0878 | No |
| 82 | Ripk2 | 11001 | -0.044 | -0.0903 | No |
| 83 | Il1r1 | 11160 | -0.049 | -0.0971 | No |
| 84 | P2rx4 | 11199 | -0.051 | -0.0977 | No |
| 85 | Chst2 | 11264 | -0.053 | -0.0995 | No |
| 86 | Atp2c1 | 11281 | -0.053 | -0.0988 | No |
| 87 | Tnfrsf1b | 11515 | -0.061 | -0.1091 | No |
| 88 | Mefv | 11524 | -0.062 | -0.1078 | No |
| 89 | Csf1 | 11596 | -0.064 | -0.1096 | No |
| 90 | Vip | 11668 | -0.066 | -0.1114 | No |
| 91 | Pcdh7 | 11762 | -0.068 | -0.1143 | No |
| 92 | Csf3r | 11799 | -0.069 | -0.1143 | No |
| 93 | Slc11a2 | 11802 | -0.069 | -0.1124 | No |
| 94 | Ptger4 | 12128 | -0.081 | -0.1269 | No |
| 95 | Hrh1 | 12271 | -0.085 | -0.1319 | No |
| 96 | Tlr2 | 12461 | -0.092 | -0.1391 | No |
| 97 | Cx3cl1 | 12588 | -0.096 | -0.1429 | No |
| 98 | Osm | 12662 | -0.098 | -0.1439 | No |
| 99 | Tnfsf9 | 12705 | -0.100 | -0.1432 | No |
| 100 | Emp3 | 12930 | -0.109 | -0.1517 | No |
| 101 | Il15 | 13079 | -0.115 | -0.1561 | No |
| 102 | Kif1b | 13212 | -0.120 | -0.1596 | No |
| 103 | Lyn | 13339 | -0.124 | -0.1626 | No |
| 104 | Pde4b | 13900 | -0.145 | -0.1875 | No |
| 105 | Ifnar1 | 14385 | -0.164 | -0.2079 | No |
| 106 | Raf1 | 14529 | -0.170 | -0.2105 | No |
| 107 | Tlr1 | 14854 | -0.181 | -0.2221 | Yes |
| 108 | Nmi | 14890 | -0.183 | -0.2187 | Yes |
| 109 | Sell | 14893 | -0.183 | -0.2137 | Yes |
| 110 | Cmklr1 | 14952 | -0.185 | -0.2115 | Yes |
| 111 | Acvr1b | 15024 | -0.189 | -0.2098 | Yes |
| 112 | Osmr | 15108 | -0.192 | -0.2087 | Yes |
| 113 | Ptger2 | 15174 | -0.195 | -0.2066 | Yes |
| 114 | Ccl5 | 15335 | -0.204 | -0.2091 | Yes |
| 115 | Nlrp3 | 15390 | -0.206 | -0.2061 | Yes |
| 116 | Slc4a4 | 15622 | -0.219 | -0.2119 | Yes |
| 117 | Il7r | 15695 | -0.222 | -0.2094 | Yes |
| 118 | Met | 15721 | -0.223 | -0.2044 | Yes |
| 119 | Acvr2a | 15723 | -0.223 | -0.1982 | Yes |
| 120 | Irf7 | 15874 | -0.231 | -0.1994 | Yes |
| 121 | Bst2 | 15968 | -0.237 | -0.1976 | Yes |
| 122 | Ly6e | 16030 | -0.240 | -0.1940 | Yes |
| 123 | Ahr | 16120 | -0.245 | -0.1917 | Yes |
| 124 | Selenos | 16178 | -0.249 | -0.1876 | Yes |
| 125 | Sri | 16190 | -0.250 | -0.1811 | Yes |
| 126 | Gpc3 | 16233 | -0.251 | -0.1762 | Yes |
| 127 | Stab1 | 16544 | -0.271 | -0.1846 | Yes |
| 128 | Il18 | 16617 | -0.275 | -0.1806 | Yes |
| 129 | Ccr7 | 16687 | -0.280 | -0.1763 | Yes |
| 130 | Gpr132 | 16805 | -0.287 | -0.1743 | Yes |
| 131 | Ifitm1 | 16821 | -0.288 | -0.1670 | Yes |
| 132 | Il4ra | 16907 | -0.293 | -0.1631 | Yes |
| 133 | Tnfsf10 | 16985 | -0.299 | -0.1587 | Yes |
| 134 | Eif2ak2 | 17007 | -0.300 | -0.1513 | Yes |
| 135 | Itgb3 | 17113 | -0.307 | -0.1481 | Yes |
| 136 | Ptafr | 17274 | -0.317 | -0.1474 | Yes |
| 137 | Ebi3 | 17369 | -0.325 | -0.1432 | Yes |
| 138 | Tlr3 | 17878 | -0.372 | -0.1589 | Yes |
| 139 | Pik3r5 | 18139 | -0.398 | -0.1612 | Yes |
| 140 | Tnfrsf9 | 18183 | -0.404 | -0.1520 | Yes |
| 141 | Irak2 | 18429 | -0.432 | -0.1525 | Yes |
| 142 | Rtp4 | 18490 | -0.440 | -0.1432 | Yes |
| 143 | Lcp2 | 18576 | -0.451 | -0.1349 | Yes |
| 144 | Hbegf | 18595 | -0.454 | -0.1231 | Yes |
| 145 | Dcbld2 | 18685 | -0.469 | -0.1145 | Yes |
| 146 | Kcnmb2 | 18788 | -0.490 | -0.1060 | Yes |
| 147 | Ccrl2 | 18793 | -0.491 | -0.0924 | Yes |
| 148 | Rgs1 | 19223 | -0.613 | -0.0973 | Yes |
| 149 | Ptgir | 19342 | -0.687 | -0.0841 | Yes |
| 150 | Abca1 | 19435 | -0.782 | -0.0668 | Yes |
| 151 | Best1 | 19453 | -0.808 | -0.0450 | Yes |
| 152 | Lck | 19460 | -0.817 | -0.0223 | Yes |
| 153 | Scarf1 | 19478 | -0.886 | 0.0018 | Yes |

