| Dataset | MPP.MPP_Pheno.cls#Group3_versus_Group4.MPP_Pheno.cls#Group3_versus_Group4_repos |
| Phenotype | MPP_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_EARLY |
| Enrichment Score (ES) | 0.27087307 |
| Normalized Enrichment Score (NES) | 1.1191212 |
| Nominal p-value | 0.27552986 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.988 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Stc2 | 25 | 1.071 | 0.0283 | Yes |
| 2 | Wfs1 | 58 | 0.927 | 0.0522 | Yes |
| 3 | Greb1 | 407 | 0.640 | 0.0518 | Yes |
| 4 | Lrig1 | 451 | 0.619 | 0.0667 | Yes |
| 5 | Ccnd1 | 542 | 0.592 | 0.0784 | Yes |
| 6 | Akap1 | 627 | 0.563 | 0.0895 | Yes |
| 7 | Celsr2 | 707 | 0.543 | 0.1004 | Yes |
| 8 | Unc119 | 757 | 0.534 | 0.1126 | Yes |
| 9 | Tpbg | 861 | 0.511 | 0.1214 | Yes |
| 10 | Slc22a5 | 906 | 0.504 | 0.1330 | Yes |
| 11 | Nxt1 | 975 | 0.492 | 0.1430 | Yes |
| 12 | Klf4 | 1143 | 0.462 | 0.1472 | Yes |
| 13 | Olfml3 | 1262 | 0.443 | 0.1533 | Yes |
| 14 | Tob1 | 1307 | 0.437 | 0.1630 | Yes |
| 15 | Isg20l2 | 1427 | 0.423 | 0.1686 | Yes |
| 16 | Dlc1 | 1502 | 0.415 | 0.1762 | Yes |
| 17 | Mybl1 | 1617 | 0.401 | 0.1814 | Yes |
| 18 | Tgif2 | 1664 | 0.396 | 0.1899 | Yes |
| 19 | Papss2 | 1666 | 0.396 | 0.2008 | Yes |
| 20 | Mreg | 1853 | 0.377 | 0.2015 | Yes |
| 21 | Endod1 | 1977 | 0.365 | 0.2053 | Yes |
| 22 | Il6st | 2119 | 0.354 | 0.2077 | Yes |
| 23 | Dynlt3 | 2285 | 0.340 | 0.2086 | Yes |
| 24 | Tpd52l1 | 2294 | 0.339 | 0.2175 | Yes |
| 25 | Syngr1 | 2324 | 0.336 | 0.2253 | Yes |
| 26 | Aldh3b1 | 2364 | 0.332 | 0.2324 | Yes |
| 27 | Car12 | 2534 | 0.322 | 0.2326 | Yes |
| 28 | Abat | 2572 | 0.319 | 0.2394 | Yes |
| 29 | Elovl2 | 2688 | 0.309 | 0.2420 | Yes |
| 30 | Olfm1 | 2790 | 0.301 | 0.2451 | Yes |
| 31 | Slc2a1 | 2821 | 0.298 | 0.2518 | Yes |
| 32 | Slc16a1 | 2847 | 0.296 | 0.2587 | Yes |
| 33 | Rapgefl1 | 3020 | 0.285 | 0.2576 | Yes |
| 34 | Tbc1d30 | 3057 | 0.282 | 0.2636 | Yes |
| 35 | Bcl2 | 3067 | 0.282 | 0.2709 | Yes |
| 36 | Slc27a2 | 3373 | 0.264 | 0.2624 | No |
| 37 | Il17rb | 3734 | 0.245 | 0.2505 | No |
| 38 | Rrp12 | 3846 | 0.238 | 0.2513 | No |
| 39 | Dhcr7 | 3902 | 0.234 | 0.2550 | No |
| 40 | Reep1 | 3914 | 0.234 | 0.2608 | No |
| 41 | Ret | 4069 | 0.225 | 0.2591 | No |
| 42 | Clic3 | 4480 | 0.205 | 0.2435 | No |
| 43 | Retreg1 | 4680 | 0.195 | 0.2386 | No |
| 44 | Itpk1 | 4763 | 0.189 | 0.2396 | No |
| 45 | Pmaip1 | 4790 | 0.188 | 0.2434 | No |
| 46 | Celsr1 | 4918 | 0.181 | 0.2419 | No |
| 47 | Fasn | 5138 | 0.171 | 0.2353 | No |
| 48 | Elovl5 | 5876 | 0.141 | 0.2011 | No |
| 49 | Nrip1 | 5920 | 0.138 | 0.2027 | No |
| 50 | Frk | 5966 | 0.137 | 0.2041 | No |
| 51 | Abca3 | 6057 | 0.133 | 0.2031 | No |
| 52 | Rbbp8 | 6129 | 0.129 | 0.2030 | No |
| 53 | Ugcg | 6177 | 0.127 | 0.2041 | No |
| 54 | Elf1 | 6276 | 0.122 | 0.2024 | No |
| 55 | Ablim1 | 6294 | 0.121 | 0.2048 | No |
| 56 | Cish | 6415 | 0.117 | 0.2019 | No |
| 57 | Slc7a2 | 6490 | 0.114 | 0.2012 | No |
| 58 | Pex11a | 6554 | 0.111 | 0.2010 | No |
| 59 | Snx24 | 6645 | 0.108 | 0.1993 | No |
| 60 | Cbfa2t3 | 6698 | 0.106 | 0.1995 | No |
| 61 | Rhobtb3 | 6738 | 0.104 | 0.2003 | No |
| 62 | P2ry2 | 6788 | 0.102 | 0.2006 | No |
| 63 | Fos | 6904 | 0.097 | 0.1974 | No |
| 64 | Tjp3 | 6963 | 0.095 | 0.1970 | No |
| 65 | Inpp5f | 7047 | 0.092 | 0.1952 | No |
| 66 | Sfn | 7120 | 0.090 | 0.1940 | No |
| 67 | Asb13 | 7268 | 0.084 | 0.1887 | No |
| 68 | Ppif | 7395 | 0.079 | 0.1844 | No |
| 69 | Tiparp | 7459 | 0.077 | 0.1833 | No |
| 70 | Podxl | 7531 | 0.075 | 0.1816 | No |
| 71 | Mast4 | 7593 | 0.073 | 0.1805 | No |
| 72 | Slc1a4 | 7936 | 0.061 | 0.1645 | No |
| 73 | Scarb1 | 8010 | 0.058 | 0.1623 | No |
| 74 | Med13l | 8120 | 0.054 | 0.1582 | No |
| 75 | Amfr | 8199 | 0.051 | 0.1556 | No |
| 76 | Fkbp4 | 8219 | 0.051 | 0.1560 | No |
| 77 | Gfra1 | 8274 | 0.049 | 0.1545 | No |
| 78 | Kazn | 8287 | 0.048 | 0.1552 | No |
| 79 | Add3 | 8291 | 0.048 | 0.1564 | No |
| 80 | Cd44 | 8439 | 0.042 | 0.1500 | No |
| 81 | Arl3 | 8463 | 0.041 | 0.1499 | No |
| 82 | Dhrs3 | 8852 | 0.027 | 0.1306 | No |
| 83 | Abhd2 | 8926 | 0.025 | 0.1275 | No |
| 84 | Xbp1 | 8954 | 0.023 | 0.1268 | No |
| 85 | B4galt1 | 8998 | 0.022 | 0.1251 | No |
| 86 | Slc24a3 | 9114 | 0.018 | 0.1197 | No |
| 87 | Pdzk1 | 9216 | 0.014 | 0.1149 | No |
| 88 | Flnb | 9268 | 0.013 | 0.1126 | No |
| 89 | Rps6ka2 | 9372 | 0.009 | 0.1075 | No |
| 90 | Svil | 9415 | 0.008 | 0.1056 | No |
| 91 | Kdm4b | 9485 | 0.006 | 0.1022 | No |
| 92 | Tiam1 | 9541 | 0.005 | 0.0995 | No |
| 93 | Myc | 9550 | 0.004 | 0.0992 | No |
| 94 | Fdft1 | 9643 | 0.001 | 0.0945 | No |
| 95 | Cxcl12 | 9715 | 0.000 | 0.0908 | No |
| 96 | Tmprss3 | 9828 | -0.002 | 0.0851 | No |
| 97 | Gla | 9957 | -0.007 | 0.0786 | No |
| 98 | Rab17 | 10175 | -0.014 | 0.0678 | No |
| 99 | Rara | 10395 | -0.022 | 0.0571 | No |
| 100 | Ptges | 10638 | -0.030 | 0.0454 | No |
| 101 | Sult2b1 | 10644 | -0.030 | 0.0460 | No |
| 102 | Ncor2 | 10689 | -0.032 | 0.0446 | No |
| 103 | Slc7a5 | 10691 | -0.032 | 0.0454 | No |
| 104 | Adcy9 | 10791 | -0.036 | 0.0413 | No |
| 105 | Aff1 | 10882 | -0.039 | 0.0377 | No |
| 106 | Myb | 10893 | -0.040 | 0.0383 | No |
| 107 | Sec14l2 | 10955 | -0.043 | 0.0363 | No |
| 108 | Fkbp5 | 11164 | -0.050 | 0.0270 | No |
| 109 | Gja1 | 11171 | -0.050 | 0.0280 | No |
| 110 | Deptor | 11200 | -0.051 | 0.0280 | No |
| 111 | Tmem164 | 11529 | -0.062 | 0.0127 | No |
| 112 | Cldn7 | 11667 | -0.066 | 0.0075 | No |
| 113 | Bag1 | 11828 | -0.070 | 0.0011 | No |
| 114 | Slc19a2 | 11973 | -0.075 | -0.0042 | No |
| 115 | Hspb8 | 12022 | -0.077 | -0.0046 | No |
| 116 | Farp1 | 12244 | -0.084 | -0.0137 | No |
| 117 | Ar | 12396 | -0.090 | -0.0190 | No |
| 118 | Thsd4 | 12670 | -0.099 | -0.0304 | No |
| 119 | Igf1r | 12675 | -0.099 | -0.0279 | No |
| 120 | Sh3bp5 | 12729 | -0.101 | -0.0278 | No |
| 121 | Nav2 | 13001 | -0.111 | -0.0387 | No |
| 122 | Igfbp4 | 13171 | -0.118 | -0.0442 | No |
| 123 | Wwc1 | 13174 | -0.118 | -0.0411 | No |
| 124 | Mybbp1a | 13247 | -0.120 | -0.0415 | No |
| 125 | Nadsyn1 | 13313 | -0.123 | -0.0414 | No |
| 126 | Hes1 | 13693 | -0.138 | -0.0572 | No |
| 127 | Slc39a6 | 13825 | -0.142 | -0.0600 | No |
| 128 | Zfp185 | 13847 | -0.143 | -0.0572 | No |
| 129 | Rab31 | 13937 | -0.146 | -0.0577 | No |
| 130 | Slc1a1 | 13974 | -0.148 | -0.0555 | No |
| 131 | Mpped2 | 14309 | -0.161 | -0.0684 | No |
| 132 | Cant1 | 14563 | -0.172 | -0.0767 | No |
| 133 | Siah2 | 14881 | -0.183 | -0.0880 | No |
| 134 | Scnn1a | 15215 | -0.198 | -0.0998 | No |
| 135 | Cyp26b1 | 15382 | -0.206 | -0.1027 | No |
| 136 | Blvrb | 15414 | -0.207 | -0.0986 | No |
| 137 | Jak2 | 15746 | -0.224 | -0.1095 | No |
| 138 | Krt18 | 15890 | -0.232 | -0.1105 | No |
| 139 | Myof | 15981 | -0.238 | -0.1086 | No |
| 140 | Rhod | 16698 | -0.280 | -0.1379 | No |
| 141 | Bhlhe40 | 16722 | -0.281 | -0.1313 | No |
| 142 | Chpt1 | 16785 | -0.285 | -0.1266 | No |
| 143 | Med24 | 16788 | -0.285 | -0.1189 | No |
| 144 | Slc26a2 | 17317 | -0.320 | -0.1373 | No |
| 145 | Anxa9 | 17557 | -0.342 | -0.1402 | No |
| 146 | Ttc39a | 17880 | -0.372 | -0.1466 | No |
| 147 | Mlph | 17882 | -0.373 | -0.1364 | No |
| 148 | Mapt | 17920 | -0.378 | -0.1279 | No |
| 149 | Gab2 | 18024 | -0.389 | -0.1225 | No |
| 150 | Pgr | 18091 | -0.393 | -0.1150 | No |
| 151 | Slc37a1 | 18168 | -0.402 | -0.1079 | No |
| 152 | Muc1 | 18227 | -0.408 | -0.0996 | No |
| 153 | Klf10 | 18425 | -0.431 | -0.0979 | No |
| 154 | Prss23 | 18530 | -0.445 | -0.0910 | No |
| 155 | Bcl11b | 19041 | -0.542 | -0.1024 | No |
| 156 | Opn3 | 19111 | -0.569 | -0.0903 | No |
| 157 | Fhl2 | 19124 | -0.571 | -0.0752 | No |
| 158 | Kcnk5 | 19127 | -0.572 | -0.0595 | No |
| 159 | Plaat3 | 19185 | -0.597 | -0.0460 | No |
| 160 | Tgm2 | 19313 | -0.670 | -0.0341 | No |
| 161 | Sybu | 19436 | -0.782 | -0.0188 | No |
| 162 | Mindy1 | 19465 | -0.823 | 0.0024 | No |

