DatasetMPP.MPP_Pheno.cls#Group3_versus_Group4.MPP_Pheno.cls#Group3_versus_Group4_repos
PhenotypeMPP_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.48228002
Normalized Enrichment Score (NES)1.4699156
Nominal p-value0.13849287
FDR q-value0.44492722
FWER p-Value0.517
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Racgap1161.1790.0261Yes
2Aurkb351.0370.0489Yes
3Kif2c410.9990.0715Yes
4Cdc25b890.8790.0891Yes
5Tcf191620.7950.1036Yes
6Cdca81780.7740.1205Yes
7Plk12750.7030.1316Yes
8Stmn13260.6790.1445Yes
9Hmmr4390.6240.1530Yes
10Cdca34450.6210.1669Yes
11Spc255170.6020.1770Yes
12Jpt15290.5980.1901Yes
13Espl16700.5490.1954Yes
14Ung7050.5430.2061Yes
15Cnot97780.5290.2144Yes
16Top2a9170.5020.2188Yes
17Mad2l19250.5010.2298Yes
18Depdc1a9370.4990.2407Yes
19Bub1b10030.4840.2484Yes
20Cenpe10040.4830.2594Yes
21Ncapd210140.4820.2700Yes
22Shmt110630.4740.2783Yes
23Mki6711370.4630.2852Yes
24Ccnb211440.4620.2954Yes
25Cdkn312680.4420.2991Yes
26Bard113110.4360.3069Yes
27Spc2413610.4310.3142Yes
28Dclre1b14200.4240.3209Yes
29Kif414250.4240.3304Yes
30Spag515000.4160.3361Yes
31Plk415630.4080.3422Yes
32Cdk116240.4010.3483Yes
33Tubb516670.3950.3551Yes
34Tmpo17680.3850.3588Yes
35Dlgap518400.3780.3637Yes
36Wee118440.3780.3722Yes
37Trip1318500.3770.3806Yes
38Cit18660.3760.3884Yes
39Kif18b19410.3690.3930Yes
40Hmgb220110.3630.3977Yes
41Slbp20490.3590.4040Yes
42Prim222300.3460.4026Yes
43Prdx422820.3410.4077Yes
44Diaph323500.3330.4119Yes
45Exosc825140.3240.4108Yes
46Nop5625300.3230.4174Yes
47Birc526040.3160.4209Yes
48Dck26680.3110.4247Yes
49Cks1b26850.3090.4309Yes
50Atad227450.3040.4348Yes
51E2f828810.2940.4346Yes
52Asf1b29710.2890.4366Yes
53Cdkn2a30350.2840.4398Yes
54Smc432300.2720.4360Yes
55Wdr9033040.2680.4383Yes
56Cenpm33660.2640.4412Yes
57Cdc2033990.2620.4455Yes
58Suv39h135480.2550.4437Yes
59Lmnb135860.2530.4476Yes
60Tk136150.2510.4519Yes
61Pold136510.2490.4558Yes
62Mcm238110.2400.4530Yes
63Cbx539200.2330.4528Yes
64Tacc339760.2300.4552Yes
65Cks239850.2300.4600Yes
66Ube2t40220.2280.4633Yes
67H2az140330.2270.4680Yes
68Hells40650.2250.4716Yes
69Mcm543130.2140.4637Yes
70Melk43870.2110.4647Yes
71Asf1a43920.2100.4693Yes
72Ubr744150.2090.4729Yes
73Brca144320.2080.4769Yes
74Srsf246040.1990.4726Yes
75Timeless46480.1970.4749Yes
76Xpo147480.1910.4741Yes
77Gspt147910.1880.4762Yes
78Hmgb348380.1850.4780Yes
79Ube2s48390.1850.4823Yes
80Mxd350500.1750.4754No
81Nudt2152060.1670.4712No
82Gins452590.1640.4723No
83Cdc25a53480.1600.4714No
84Pole53710.1590.4739No
85Kif2254500.1560.4734No
86Ipo754920.1540.4748No
87Dek56080.1500.4723No
88Lig157370.1470.4690No
89Ssrp157870.1440.4698No
90Rfc257980.1440.4725No
91Srsf159230.1380.4693No
92Syncrip59310.1380.4721No
93Gins160970.1310.4665No
94Ddx39a61920.1260.4645No
95Rbbp762520.1230.4643No
96Cdkn1a62690.1220.4663No
97Ak262730.1220.4689No
98Tra2b62990.1210.4704No
99Gins363310.1200.4715No
100Chek163540.1190.4731No
101Pole465710.1100.4644No
102Dctpp166260.1080.4641No
103Nasp66570.1070.4650No
104Dnmt167250.1040.4639No
105Ctcf67700.1020.4640No
106Rrm268140.1010.4641No
107Usp168560.0990.4642No
108Rfc169520.0960.4615No
109Rad51ap170710.0910.4574No
110Hus170830.0910.4589No
111Mms22l71060.0900.4599No
112Mcm671770.0870.4582No
113Smc372540.0850.4562No
114Pms273900.0790.4511No
115Pds5b73990.0790.4525No
116Mre11a75120.0750.4484No
117Rad51c75710.0740.4471No
118Cdkn2c75970.0730.4474No
119Rad5076240.0720.4477No
120Ilf377300.0680.4439No
121Rad2177720.0670.4433No
122Hnrnpd78090.0650.4429No
123Mcm478790.0630.4408No
124Tbrg478850.0630.4419No
125Brca279350.0610.4408No
126H2ax83780.0440.4189No
127Ranbp183870.0440.4195No
128Eed84310.0420.4182No
129Hmga1b85020.0400.4155No
130Pttg185750.0370.4126No
131Chek286480.0350.4097No
132Rpa186650.0340.4096No
133Anp32e86780.0330.4098No
134Brms1l86910.0330.4099No
135Rpa386980.0330.4103No
136Mthfd288340.0280.4040No
137Psmc3ip88620.0270.4032No
138Xrcc688690.0270.4035No
139Phf5a88900.0260.4030No
140Ppp1r889130.0250.4025No
141Paics89560.0230.4008No
142Ccp11091200.0180.3928No
143Zw1091410.0170.3922No
144Nup20591950.0150.3898No
145Nap1l194250.0080.3781No
146Nup10794730.0070.3758No
147Dut95160.0060.3738No
148Lbr95290.0050.3733No
149Myc95500.0040.3723No
150Ezh29769-0.0000.3610No
151Rfc39831-0.0020.3579No
152Pan29890-0.0040.3550No
153Ing39933-0.0060.3530No
154Mlh19996-0.0080.3500No
155Luc7l310079-0.0110.3460No
156Tfrc10115-0.0120.3444No
157Lsm810182-0.0150.3413No
158Mcm310259-0.0170.3378No
159Donson10280-0.0180.3372No
160Msh210362-0.0200.3334No
161Aurka10413-0.0220.3314No
162Smc610442-0.0230.3304No
163Tubg110483-0.0250.3289No
164Psip111133-0.0480.2964No
165Mybl211154-0.0490.2965No
166Smc1a11471-0.0600.2815No
167Prkdc11777-0.0680.2673No
168Ppm1d11801-0.0690.2677No
169Ran11961-0.0750.2612No
170Nbn12374-0.0890.2419No
171Cse1l12540-0.0950.2355No
172Pold312560-0.0950.2367No
173Eif2s112740-0.1010.2297No
174Pop712896-0.1070.2242No
175Nme112906-0.1070.2262No
176Stag112959-0.1100.2260No
177Nup15313158-0.1180.2184No
178Orc213326-0.1240.2126No
179Rpa213410-0.1270.2112No
180Pola213459-0.1290.2117No
181Rad113471-0.1300.2141No
182Lyar13513-0.1320.2150No
183Orc613712-0.1390.2079No
184Nolc114503-0.1690.1709No
185Pcna14665-0.1760.1666No
186Pnn15113-0.1920.1478No
187Mcm715153-0.1940.1502No
188Pold215849-0.2290.1195No
189Rnaseh2a16024-0.2400.1160No
190Cdk416155-0.2480.1149No
191Trp5316300-0.2550.1132No
192Pa2g416496-0.2680.1093No
193Cdkn1b16501-0.2680.1152No
194Tipin16915-0.2940.1005No
195Snrpb17008-0.3000.1026No
196Dscc117519-0.3370.0839No
197Ccne118154-0.4000.0602No
198Prps118479-0.4380.0535No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS