Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group3_versus_Group4.MPP_Pheno.cls#Group3_versus_Group4_repos
Phenotype	MPP_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	-0.20436879
Normalized Enrichment Score (NES)	-0.8852923
Nominal p-value	0.6519115
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Itga3	83	0.886	0.0205	No
2	Icam2	209	0.748	0.0350	No
3	Pik3r3	250	0.721	0.0531	No
4	Kcnh2	325	0.679	0.0683	No
5	Mpzl1	350	0.665	0.0857	No
6	Mapk11	712	0.542	0.0822	No
7	Nectin2	742	0.538	0.0958	No
8	Src	1122	0.465	0.0892	No
9	Fscn1	1181	0.456	0.0990	No
10	Amigo2	1293	0.438	0.1055	No
11	Adam15	1383	0.428	0.1129	No
12	Amh	2004	0.364	0.0911	No
13	Irs1	2025	0.362	0.1001	No
14	Pard6g	2251	0.344	0.0981	No
15	Nectin4	2315	0.336	0.1043	No
16	Insig1	2385	0.329	0.1100	No
17	Tspan4	2410	0.328	0.1179	No
18	Evl	2654	0.312	0.1141	No
19	Myh9	2740	0.305	0.1182	No
20	Nfasc	3191	0.274	0.1027	No
21	Epb41l2	3341	0.266	0.1024	No
22	Ptk2	3396	0.262	0.1069	No
23	Cldn4	3491	0.258	0.1093	No
24	Itgb4	3543	0.256	0.1138	No
25	Vav2	3614	0.252	0.1173	No
26	Cdk8	3825	0.239	0.1131	No
27	Vcam1	3840	0.238	0.1191	No
28	Gtf2f1	3922	0.233	0.1214	No
29	Cadm3	3966	0.231	0.1256	No
30	Actb	4035	0.227	0.1285	No
31	Cntn1	4090	0.224	0.1320	No
32	Myh10	4153	0.221	0.1350	No
33	Adam23	4257	0.217	0.1357	No
34	Traf1	4271	0.217	0.1411	No
35	Ywhah	4336	0.213	0.1438	No
36	Map3k20	4445	0.208	0.1440	No
37	Icam1	4737	0.191	0.1343	No
38	Tmem8b	4739	0.191	0.1396	No
39	Cdh1	4953	0.180	0.1337	No
40	Tjp1	4956	0.180	0.1386	No
41	Pten	5106	0.172	0.1357	No
42	Alox8	5200	0.168	0.1356	No
43	Mapk14	5890	0.140	0.1039	No
44	Nectin1	6055	0.133	0.0992	No
45	Itgb1	6099	0.131	0.1006	No
46	Lamb3	6679	0.106	0.0736	No
47	Cdh6	6754	0.103	0.0727	No
48	Actn4	6840	0.099	0.0711	No
49	Nlgn2	6841	0.099	0.0739	No
50	Rasa1	6877	0.098	0.0748	No
51	Nf2	6950	0.096	0.0738	No
52	Nrtn	6966	0.095	0.0757	No
53	Mvd	7125	0.089	0.0700	No
54	Actn2	7163	0.088	0.0706	No
55	Nrap	7231	0.085	0.0695	No
56	Plcg1	7359	0.080	0.0652	No
57	Syk	7403	0.079	0.0652	No
58	Stx4a	7432	0.078	0.0659	No
59	Myl12b	7523	0.075	0.0634	No
60	Nrxn2	7654	0.071	0.0586	No
61	Col16a1	7677	0.071	0.0595	No
62	Mmp2	7818	0.065	0.0541	No
63	Negr1	7870	0.063	0.0532	No
64	Ptprc	7997	0.058	0.0483	No
65	Pals1	8166	0.052	0.0411	No
66	Slit2	8207	0.051	0.0404	No
67	Hras	8294	0.048	0.0373	No
68	Cd34	8359	0.045	0.0353	No
69	Icam4	8369	0.045	0.0361	No
70	Crat	8533	0.038	0.0287	No
71	Cd274	8549	0.038	0.0290	No
72	B4galt1	8998	0.022	0.0065	No
73	Msn	9097	0.019	0.0020	No
74	Tro	9230	0.014	-0.0045	No
75	Rsu1	9240	0.014	-0.0046	No
76	Ikbkg	9250	0.013	-0.0047	No
77	Pkd1	9278	0.012	-0.0057	No
78	Speg	9291	0.012	-0.0060	No
79	Thy1	9666	0.001	-0.0253	No
80	Adamts5	9695	0.000	-0.0267	No
81	Cdh8	9708	0.000	-0.0274	No
82	Tial1	10060	-0.010	-0.0452	No
83	Pfn1	10112	-0.012	-0.0475	No
84	Fbn1	10456	-0.024	-0.0646	No
85	Tubg1	10483	-0.025	-0.0652	No
86	Akt3	10727	-0.033	-0.0768	No
87	Lama3	10859	-0.038	-0.0825	No
88	Exoc4	10920	-0.041	-0.0845	No
89	Skap2	11392	-0.057	-0.1072	No
90	Ldlrap1	11479	-0.060	-0.1100	No
91	Jup	11518	-0.062	-0.1102	No
92	Thbs3	11556	-0.063	-0.1103	No
93	Dhx16	11629	-0.065	-0.1122	No
94	Cldn7	11667	-0.066	-0.1123	No
95	Adam9	11766	-0.068	-0.1155	No
96	Sgce	11996	-0.076	-0.1252	No
97	Lima1	12205	-0.083	-0.1336	No
98	Gnai2	12310	-0.086	-0.1366	No
99	Nectin3	12559	-0.095	-0.1467	No
100	Cx3cl1	12588	-0.096	-0.1455	No
101	Arpc2	12689	-0.099	-0.1478	No
102	Pbx2	12716	-0.101	-0.1464	No
103	Zyx	12776	-0.103	-0.1465	No
104	Gnai1	13047	-0.113	-0.1573	No
105	Actg1	13076	-0.115	-0.1555	No
106	Tsc1	13078	-0.115	-0.1524	No
107	Sympk	13108	-0.116	-0.1506	No
108	Pecam1	13151	-0.117	-0.1495	No
109	Bmp1	13378	-0.126	-0.1577	No
110	Cap1	13455	-0.129	-0.1580	No
111	Wasl	13562	-0.133	-0.1598	No
112	Shc1	13700	-0.139	-0.1630	No
113	Akt2	13710	-0.139	-0.1595	No
114	Dlg1	14092	-0.152	-0.1750	No
115	Arhgef6	14108	-0.153	-0.1714	No
116	Vcl	14239	-0.158	-0.1737	No
117	Nf1	14429	-0.166	-0.1789	No
118	Amigo1	14548	-0.171	-0.1802	No
119	Itga9	14555	-0.171	-0.1757	No
120	Taok2	14757	-0.180	-0.1810	No
121	Itga10	15022	-0.189	-0.1894	No
122	Nexn	15038	-0.189	-0.1849	No
123	Ctnna1	15170	-0.195	-0.1862	No
124	Map4k2	15266	-0.200	-0.1855	No
125	Sorbs3	15433	-0.209	-0.1882	No
126	Inppl1	15457	-0.210	-0.1835	No
127	Nlgn3	15617	-0.218	-0.1856	No
128	Baiap2	15636	-0.220	-0.1804	No
129	Dsc1	15663	-0.221	-0.1756	No
130	Rac2	15689	-0.221	-0.1707	No
131	Rras	15965	-0.236	-0.1783	No
132	Mdk	16110	-0.245	-0.1789	No
133	Vasp	16328	-0.257	-0.1829	No
134	Itga2	16535	-0.270	-0.1860	No
135	Cadm2	16892	-0.293	-0.1962	Yes
136	Shroom2	16928	-0.295	-0.1897	Yes
137	Icam5	16934	-0.295	-0.1817	Yes
138	Cnn2	16945	-0.295	-0.1740	Yes
139	Hadh	16949	-0.296	-0.1659	Yes
140	Sdc3	17117	-0.307	-0.1659	Yes
141	Ctnnd1	17207	-0.312	-0.1617	Yes
142	Actn1	17270	-0.317	-0.1561	Yes
143	Atp1a3	17440	-0.329	-0.1556	Yes
144	Wnk4	17585	-0.345	-0.1534	Yes
145	Cdh11	17786	-0.364	-0.1535	Yes
146	Crb3	17819	-0.368	-0.1449	Yes
147	Jam3	18062	-0.391	-0.1464	Yes
148	Mapk13	18109	-0.396	-0.1377	Yes
149	Cd86	18189	-0.404	-0.1305	Yes
150	Gamt	18228	-0.408	-0.1210	Yes
151	Cd276	18269	-0.413	-0.1115	Yes
152	Cdh4	18514	-0.444	-0.1117	Yes
153	Sirpa	18667	-0.466	-0.1065	Yes
154	Cercam	18759	-0.483	-0.0977	Yes
155	Actn3	18812	-0.494	-0.0866	Yes
156	Pik3cb	18898	-0.511	-0.0766	Yes
157	Rhof	19051	-0.546	-0.0692	Yes
158	Tgfbi	19066	-0.552	-0.0545	Yes
159	Vwf	19095	-0.563	-0.0401	Yes
160	Layn	19119	-0.570	-0.0254	Yes
161	Cldn15	19210	-0.607	-0.0130	Yes
162	Vcan	19498	-1.021	0.0007	Yes