DatasetMPP.MPP_Pheno.cls#Group2_versus_Group4.MPP_Pheno.cls#Group2_versus_Group4_repos
PhenotypeMPP_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.48002717
Normalized Enrichment Score (NES)1.4742293
Nominal p-value0.15913557
FDR q-value1.0
FWER p-Value0.48
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hnrnpu1910.7390.0066Yes
2Mcm23060.6680.0155Yes
3Racgap13280.6560.0290Yes
4Hspa83760.6370.0408Yes
5Srsf14870.6000.0484Yes
6Fbxo54900.5980.0616Yes
7Lmnb14990.5950.0745Yes
8Kpnb16920.5480.0767Yes
9Xpo17000.5460.0885Yes
10Prmt57840.5330.0961Yes
11Rasal28030.5290.1069Yes
12Odc19120.5100.1127Yes
13Cdc79340.5060.1228Yes
14Numa19400.5050.1338Yes
15Sqle10000.4960.1418Yes
16Mcm610170.4930.1519Yes
17Ndc8010670.4860.1602Yes
18Efna510850.4840.1701Yes
19Nasp12210.4630.1734Yes
20Nup9813310.4500.1778Yes
21Mcm313590.4470.1863Yes
22Upf113650.4460.1960Yes
23Cdc25a14960.4290.1988Yes
24Top2a15120.4280.2076Yes
25Bard115420.4240.2155Yes
26Hnrnpd15470.4230.2247Yes
27Chek116390.4130.2291Yes
28G3bp116420.4120.2382Yes
29Incenp16480.4120.2471Yes
30Kif2316740.4090.2549Yes
31Aurkb17800.3990.2584Yes
32Dtymk18190.3960.2652Yes
33Chaf1a18210.3950.2739Yes
34Smc1a18230.3950.2827Yes
35Tacc318330.3950.2910Yes
36Kif2c18590.3920.2984Yes
37Tmpo18920.3890.3054Yes
38Stmn119810.3790.3093Yes
39Exo120050.3760.3165Yes
40Tfdp122800.3500.3101Yes
41Cul123370.3450.3148Yes
42Mybl223430.3450.3222Yes
43Nsd223630.3440.3289Yes
44Kif2224390.3370.3325Yes
45Uck225060.3330.3365Yes
46Casp8ap225340.3310.3425Yes
47Amd125360.3310.3498Yes
48Pole25410.3300.3569Yes
49H2az125700.3280.3628Yes
50Sfpq26040.3260.3683Yes
51Prim227700.3140.3668Yes
52Rad23b27820.3130.3732Yes
53Cdc4527870.3120.3799Yes
54Bub128170.3100.3853Yes
55Srsf1028380.3090.3911Yes
56Cdc628770.3060.3960Yes
57Kif1129370.3030.3996Yes
58Rad2130560.2970.4001Yes
59Syncrip31390.2910.4024Yes
60Bcl331790.2880.4068Yes
61H2bc1233140.2800.4061Yes
62E2f234060.2760.4075Yes
63Mcm535880.2640.4040Yes
64Pola236420.2610.4070Yes
65Tra2b36440.2610.4128Yes
66Prc136460.2610.4186Yes
67Kif436850.2580.4223Yes
68Ilf337730.2530.4234Yes
69Hus137790.2520.4288Yes
70Ddx39a38290.2500.4318Yes
71Tle338930.2450.4340Yes
72Suv39h138990.2440.4392Yes
73Lbr39140.2440.4439Yes
74Fancc39640.2410.4467Yes
75Orc542060.2270.4393Yes
76Rad54l42370.2250.4427Yes
77Rbl142990.2210.4445Yes
78Smarcc143020.2210.4493Yes
79Espl144340.2160.4473Yes
80Ccna244790.2140.4498Yes
81Lig344890.2140.4541Yes
82Plk444900.2140.4589Yes
83Cenpe45000.2140.4632Yes
84Gspt145420.2110.4657Yes
85Hira46520.2060.4647Yes
86Kif20b46560.2060.4691Yes
87Knl146860.2040.4721Yes
88Cdkn2c47860.1980.4714Yes
89Pbk49250.1910.4685Yes
90Jpt149260.1910.4728Yes
91Ewsr150470.1870.4707Yes
92Cenpf50820.1850.4731Yes
93Kif1550930.1840.4766Yes
94Mad2l152370.1760.4732Yes
95Mapk1452480.1760.4765Yes
96Plk152570.1750.4800Yes
97Hmmr54910.1630.4716No
98Mki6754920.1630.4752No
99Brca255990.1580.4732No
100Dbf456270.1570.4753No
101Top157700.1500.4713No
102Cul559530.1410.4650No
103Cbx159600.1400.4678No
104Mtf260330.1370.4671No
105Cks1b60540.1360.4691No
106Pafah1b160880.1340.4704No
107Smc460990.1340.4729No
108Hmgb361720.1310.4721No
109Chmp1a62150.1290.4728No
110Ezh262890.1250.4718No
111Aurka62900.1250.4746No
112Dr164930.1180.4667No
113E2f365470.1160.4666No
114Sap3066470.1120.4639No
115Smc267190.1070.4626No
116Stil67220.1070.4649No
117Cdc25b67840.1040.4641No
118Ncl68620.1000.4623No
119Tent4a69920.0950.4577No
120Cul371330.0880.4525No
121Prpf4b71480.0880.4537No
122E2f172290.0840.4514No
123Smad372710.0830.4512No
124Pds5b73110.0810.4509No
125Kif5b73490.0800.4508No
126Tpx274150.0780.4492No
127Egf74810.0760.4475No
128Ccnf76050.0710.4427No
129Cdk176520.0700.4419No
130Birc577530.0650.4382No
131Atrx80460.0530.4242No
132Ctcf80520.0530.4251No
133Ythdc181400.0500.4217No
134Ttk81440.0490.4227No
135Notch282430.0450.4186No
136Nolc182850.0440.4175No
137Marcks83240.0420.4164No
138H2az283370.0420.4167No
139Ss1883980.0390.4145No
140Ccnb285080.0350.4096No
141Polq86210.0290.4045No
142Slc12a286450.0290.4039No
143Ube2s86680.0280.4034No
144Map3k2087120.0260.4018No
145Nusap187620.0240.3998No
146Troap88840.0180.3939No
147Snrpd189510.0170.3909No
148Hif1a90760.0130.3847No
149Stag190850.0130.3846No
150Gins291390.0100.3821No
151Wrn93120.0040.3733No
152Hmga1b93710.0020.3703No
153Odf29792-0.0120.3488No
154Abl19872-0.0150.3451No
155Nek210160-0.0270.3308No
156Srsf210201-0.0280.3294No
157Cdc2010289-0.0320.3256No
158Slc7a110474-0.0400.3169No
159Mnat110641-0.0450.3094No
160Slc38a111011-0.0600.2916No
161Cdc2711196-0.0680.2836No
162Cdkn1b11230-0.0690.2834No
163Arid4a11299-0.0710.2815No
164Cenpa11523-0.0800.2717No
165Ccnd111588-0.0830.2702No
166Foxn311787-0.0920.2621No
167Pml11852-0.0960.2609No
168Traip11855-0.0960.2629No
169Rps6ka512029-0.1030.2562No
170Ccnt112211-0.1100.2493No
171Cul4a12445-0.1200.2399No
172Orc612877-0.1360.2206No
173Rpa213007-0.1410.2171No
174Meis113059-0.1440.2177No
175Nup5013062-0.1440.2207No
176Cks213334-0.1570.2102No
177Pura13338-0.1570.2136No
178Ube2c13615-0.1700.2031No
179Tnpo213644-0.1710.2054No
180Slc7a514235-0.1980.1793No
181Dkc114337-0.2030.1786No
182Atf514556-0.2140.1721No
183Cdk414936-0.2330.1576No
184H2ax15101-0.2420.1545No
185E2f415113-0.2430.1594No
186Pttg115368-0.2550.1519No
187Meis215522-0.2640.1498No
188Dmd15622-0.2700.1507No
189Tgfb116282-0.3070.1235No
190Myc17043-0.3580.0921No
191Bub317154-0.3650.0945No
192Katna117325-0.3780.0941No
193Kmt5a17840-0.4260.0770No
194Cdkn317874-0.4290.0848No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT