| Dataset | MPP.MPP_Pheno.cls#Group2_versus_Group4.MPP_Pheno.cls#Group2_versus_Group4_repos |
| Phenotype | MPP_Pheno.cls#Group2_versus_Group4_repos |
| Upregulated in class | 1 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | 0.19630218 |
| Normalized Enrichment Score (NES) | 0.8964333 |
| Nominal p-value | 0.651751 |
| FDR q-value | 1.0 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Frk | 150 | 0.778 | 0.0132 | Yes |
| 2 | Prlr | 192 | 0.739 | 0.0309 | Yes |
| 3 | Il6st | 207 | 0.726 | 0.0498 | Yes |
| 4 | Cdh1 | 222 | 0.716 | 0.0683 | Yes |
| 5 | Fos | 232 | 0.708 | 0.0869 | Yes |
| 6 | Slc16a1 | 434 | 0.616 | 0.0931 | Yes |
| 7 | Zfp36 | 860 | 0.520 | 0.0852 | Yes |
| 8 | Myof | 1428 | 0.439 | 0.0677 | Yes |
| 9 | Car12 | 1441 | 0.437 | 0.0788 | Yes |
| 10 | Cish | 1479 | 0.431 | 0.0885 | Yes |
| 11 | Top2a | 1512 | 0.428 | 0.0984 | Yes |
| 12 | Fgfr3 | 1594 | 0.418 | 0.1054 | Yes |
| 13 | Tnnc1 | 1865 | 0.392 | 0.1020 | Yes |
| 14 | Ret | 1967 | 0.380 | 0.1070 | Yes |
| 15 | Tpbg | 2187 | 0.358 | 0.1053 | Yes |
| 16 | Cacna2d2 | 2254 | 0.352 | 0.1114 | Yes |
| 17 | Mocs2 | 2270 | 0.351 | 0.1201 | Yes |
| 18 | Nxt1 | 2273 | 0.350 | 0.1294 | Yes |
| 19 | Rapgefl1 | 2438 | 0.338 | 0.1300 | Yes |
| 20 | Slc1a4 | 2470 | 0.335 | 0.1374 | Yes |
| 21 | Id2 | 2550 | 0.330 | 0.1422 | Yes |
| 22 | Gla | 2553 | 0.329 | 0.1510 | Yes |
| 23 | Dynlt3 | 2557 | 0.329 | 0.1597 | Yes |
| 24 | Plac1 | 2633 | 0.324 | 0.1645 | Yes |
| 25 | Cdc6 | 2877 | 0.306 | 0.1602 | Yes |
| 26 | Gper1 | 2930 | 0.303 | 0.1657 | Yes |
| 27 | Homer2 | 3106 | 0.293 | 0.1646 | Yes |
| 28 | Ugdh | 3373 | 0.277 | 0.1583 | Yes |
| 29 | Papss2 | 3388 | 0.277 | 0.1650 | Yes |
| 30 | Lsr | 3539 | 0.267 | 0.1644 | Yes |
| 31 | Celsr2 | 3686 | 0.258 | 0.1638 | Yes |
| 32 | Slc27a2 | 3841 | 0.249 | 0.1626 | Yes |
| 33 | Aldh3a2 | 3938 | 0.242 | 0.1641 | Yes |
| 34 | Ckb | 3997 | 0.239 | 0.1676 | Yes |
| 35 | Flnb | 4027 | 0.238 | 0.1725 | Yes |
| 36 | Gjb3 | 4205 | 0.228 | 0.1694 | Yes |
| 37 | Fabp5 | 4246 | 0.225 | 0.1734 | Yes |
| 38 | Tmprss3 | 4284 | 0.222 | 0.1775 | Yes |
| 39 | Kcnk5 | 4296 | 0.222 | 0.1829 | Yes |
| 40 | Slc2a8 | 4394 | 0.218 | 0.1837 | Yes |
| 41 | Ass1 | 4407 | 0.217 | 0.1890 | Yes |
| 42 | Farp1 | 4480 | 0.214 | 0.1910 | Yes |
| 43 | Plk4 | 4490 | 0.214 | 0.1963 | Yes |
| 44 | Jak1 | 4883 | 0.193 | 0.1812 | No |
| 45 | Il17rb | 5091 | 0.184 | 0.1755 | No |
| 46 | St6galnac2 | 5193 | 0.178 | 0.1751 | No |
| 47 | Rbbp8 | 5229 | 0.177 | 0.1781 | No |
| 48 | Sfn | 5314 | 0.171 | 0.1783 | No |
| 49 | Idh2 | 5476 | 0.164 | 0.1744 | No |
| 50 | Scnn1a | 5621 | 0.157 | 0.1712 | No |
| 51 | Abhd2 | 5783 | 0.149 | 0.1669 | No |
| 52 | Hspa4l | 5909 | 0.143 | 0.1643 | No |
| 53 | Perp | 6262 | 0.126 | 0.1495 | No |
| 54 | Fkbp5 | 6314 | 0.124 | 0.1502 | No |
| 55 | Stil | 6722 | 0.107 | 0.1321 | No |
| 56 | Wfs1 | 7037 | 0.092 | 0.1183 | No |
| 57 | Slc29a1 | 7171 | 0.087 | 0.1138 | No |
| 58 | Scarb1 | 7307 | 0.081 | 0.1090 | No |
| 59 | Llgl2 | 7339 | 0.080 | 0.1096 | No |
| 60 | Bag1 | 7400 | 0.079 | 0.1086 | No |
| 61 | Amfr | 7445 | 0.077 | 0.1084 | No |
| 62 | Gale | 7867 | 0.061 | 0.0883 | No |
| 63 | Dcxr | 7885 | 0.060 | 0.0890 | No |
| 64 | Xbp1 | 7932 | 0.058 | 0.0882 | No |
| 65 | Elovl5 | 7960 | 0.056 | 0.0883 | No |
| 66 | Add3 | 8003 | 0.055 | 0.0876 | No |
| 67 | Kif20a | 8069 | 0.052 | 0.0857 | No |
| 68 | Slc22a5 | 8118 | 0.051 | 0.0845 | No |
| 69 | Tob1 | 8234 | 0.046 | 0.0798 | No |
| 70 | Pkp3 | 8240 | 0.045 | 0.0808 | No |
| 71 | Slc24a3 | 8333 | 0.042 | 0.0772 | No |
| 72 | Tpd52l1 | 8340 | 0.042 | 0.0780 | No |
| 73 | Jak2 | 8599 | 0.030 | 0.0655 | No |
| 74 | Cox6c | 8665 | 0.028 | 0.0629 | No |
| 75 | Aff1 | 8824 | 0.021 | 0.0553 | No |
| 76 | Klf4 | 8842 | 0.020 | 0.0549 | No |
| 77 | S100a9 | 8889 | 0.018 | 0.0530 | No |
| 78 | Rabep1 | 8994 | 0.015 | 0.0481 | No |
| 79 | Fkbp4 | 8997 | 0.015 | 0.0484 | No |
| 80 | Gins2 | 9139 | 0.010 | 0.0414 | No |
| 81 | Itpk1 | 9319 | 0.004 | 0.0322 | No |
| 82 | Large1 | 9418 | 0.000 | 0.0272 | No |
| 83 | Cxcl12 | 9445 | 0.000 | 0.0258 | No |
| 84 | Fdft1 | 9511 | -0.001 | 0.0225 | No |
| 85 | Rab31 | 9669 | -0.007 | 0.0146 | No |
| 86 | Dlg5 | 10161 | -0.027 | -0.0101 | No |
| 87 | Tspan13 | 10186 | -0.028 | -0.0106 | No |
| 88 | Cdc20 | 10289 | -0.032 | -0.0150 | No |
| 89 | Xrcc3 | 10631 | -0.045 | -0.0314 | No |
| 90 | Etfb | 10647 | -0.046 | -0.0309 | No |
| 91 | Plxnb1 | 10728 | -0.048 | -0.0338 | No |
| 92 | Btg3 | 10869 | -0.055 | -0.0395 | No |
| 93 | Ptges | 10890 | -0.056 | -0.0391 | No |
| 94 | Siah2 | 10994 | -0.060 | -0.0428 | No |
| 95 | Ccnd1 | 11588 | -0.083 | -0.0712 | No |
| 96 | Myb | 11773 | -0.092 | -0.0782 | No |
| 97 | Pdcd4 | 11843 | -0.095 | -0.0792 | No |
| 98 | Mdk | 11851 | -0.096 | -0.0770 | No |
| 99 | Dhcr7 | 12050 | -0.104 | -0.0844 | No |
| 100 | Tiam1 | 12102 | -0.106 | -0.0842 | No |
| 101 | Aldh3b1 | 12848 | -0.134 | -0.1191 | No |
| 102 | Pdzk1 | 12851 | -0.134 | -0.1156 | No |
| 103 | Ncor2 | 12928 | -0.138 | -0.1158 | No |
| 104 | Prkar2b | 12954 | -0.139 | -0.1133 | No |
| 105 | Dnajc1 | 12970 | -0.140 | -0.1104 | No |
| 106 | Nrip1 | 13227 | -0.151 | -0.1195 | No |
| 107 | Atp2b4 | 13350 | -0.158 | -0.1216 | No |
| 108 | Ptger3 | 13370 | -0.159 | -0.1183 | No |
| 109 | Igfbp4 | 13439 | -0.162 | -0.1174 | No |
| 110 | Sord | 13709 | -0.173 | -0.1266 | No |
| 111 | Ltf | 13847 | -0.180 | -0.1289 | No |
| 112 | Mapk13 | 13990 | -0.186 | -0.1312 | No |
| 113 | Ptpn6 | 14039 | -0.189 | -0.1286 | No |
| 114 | Bcl2 | 14158 | -0.194 | -0.1294 | No |
| 115 | Ppif | 14218 | -0.197 | -0.1272 | No |
| 116 | Slc7a5 | 14235 | -0.198 | -0.1227 | No |
| 117 | Cd44 | 14250 | -0.199 | -0.1180 | No |
| 118 | Rps6ka2 | 14300 | -0.201 | -0.1152 | No |
| 119 | Mest | 14363 | -0.204 | -0.1129 | No |
| 120 | Abca3 | 14572 | -0.215 | -0.1178 | No |
| 121 | Scube2 | 14711 | -0.221 | -0.1190 | No |
| 122 | Hspb8 | 15179 | -0.245 | -0.1365 | No |
| 123 | Tst | 15322 | -0.253 | -0.1371 | No |
| 124 | Unc13b | 15379 | -0.256 | -0.1331 | No |
| 125 | Dnajc12 | 15393 | -0.257 | -0.1268 | No |
| 126 | Olfm1 | 15615 | -0.269 | -0.1310 | No |
| 127 | Mettl3 | 15637 | -0.271 | -0.1248 | No |
| 128 | Arl3 | 15674 | -0.273 | -0.1193 | No |
| 129 | Chst8 | 15904 | -0.287 | -0.1234 | No |
| 130 | Snx10 | 15998 | -0.293 | -0.1203 | No |
| 131 | Tfpi2 | 16084 | -0.297 | -0.1167 | No |
| 132 | Rnaseh2a | 16143 | -0.301 | -0.1116 | No |
| 133 | Anxa9 | 16292 | -0.308 | -0.1110 | No |
| 134 | Batf | 16411 | -0.316 | -0.1086 | No |
| 135 | Tjp3 | 16469 | -0.319 | -0.1029 | No |
| 136 | Nab2 | 16683 | -0.332 | -0.1050 | No |
| 137 | Blvrb | 16787 | -0.339 | -0.1012 | No |
| 138 | Mapt | 16897 | -0.348 | -0.0975 | No |
| 139 | Impa2 | 16911 | -0.349 | -0.0888 | No |
| 140 | Gfus | 16975 | -0.353 | -0.0825 | No |
| 141 | Chpt1 | 17005 | -0.355 | -0.0745 | No |
| 142 | Car2 | 17138 | -0.364 | -0.0715 | No |
| 143 | Emp2 | 17159 | -0.366 | -0.0627 | No |
| 144 | Clic3 | 17213 | -0.370 | -0.0555 | No |
| 145 | Cyp26b1 | 17220 | -0.370 | -0.0458 | No |
| 146 | Sgk1 | 17305 | -0.376 | -0.0400 | No |
| 147 | St14 | 17459 | -0.390 | -0.0374 | No |
| 148 | Pgr | 17547 | -0.398 | -0.0312 | No |
| 149 | Cav1 | 17721 | -0.413 | -0.0291 | No |
| 150 | Dusp2 | 17749 | -0.415 | -0.0193 | No |
| 151 | Slc26a2 | 18054 | -0.448 | -0.0229 | No |
| 152 | Prss23 | 18132 | -0.456 | -0.0147 | No |
| 153 | Cd9 | 18507 | -0.509 | -0.0203 | No |
| 154 | Sult2b1 | 18724 | -0.545 | -0.0168 | No |
| 155 | Plaat3 | 19081 | -0.640 | -0.0179 | No |
| 156 | Opn3 | 19125 | -0.659 | -0.0024 | No |
| 157 | Isg20 | 19389 | -0.831 | 0.0064 | No |

