Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group2_versus_Group4.MPP_Pheno.cls#Group2_versus_Group4_repos
Phenotype	MPP_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	-0.21226345
Normalized Enrichment Score (NES)	-0.9432285
Nominal p-value	0.5323887
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cdk8	144	0.782	0.0111	No
2	Mpzl1	219	0.718	0.0243	No
3	Cdh1	222	0.716	0.0412	No
4	Gtf2f1	224	0.713	0.0581	No
5	Cd274	393	0.630	0.0644	No
6	Myh9	394	0.630	0.0793	No
7	Nectin2	437	0.616	0.0918	No
8	Amigo2	626	0.566	0.0955	No
9	Negr1	916	0.509	0.0927	No
10	Dhx16	1211	0.465	0.0885	No
11	Ctnna1	1558	0.422	0.0806	No
12	Ywhah	1633	0.413	0.0866	No
13	Itga3	1649	0.412	0.0956	No
14	Tjp1	1723	0.404	0.1014	No
15	Vcam1	1741	0.403	0.1101	No
16	Vav2	1804	0.397	0.1163	No
17	Traf1	2010	0.375	0.1146	No
18	Adam9	2023	0.374	0.1229	No
19	Itgb1	2048	0.372	0.1305	No
20	Icam1	2452	0.337	0.1177	No
21	Adamts5	2490	0.334	0.1237	No
22	Ikbkg	2524	0.332	0.1298	No
23	Adam23	2579	0.328	0.1348	No
24	Epb41l2	2777	0.313	0.1321	No
25	Tgfbi	2804	0.311	0.1381	No
26	Shc1	2886	0.306	0.1412	No
27	Plcg1	2913	0.304	0.1471	No
28	Adam15	3049	0.297	0.1471	No
29	Fscn1	3114	0.293	0.1508	No
30	Ptk2	3405	0.276	0.1424	No
31	Mapk11	3424	0.275	0.1480	No
32	Cadm3	3633	0.261	0.1434	No
33	Akt2	3762	0.253	0.1428	No
34	B4galt1	3803	0.251	0.1467	No
35	Jam3	3825	0.250	0.1516	No
36	Mmp2	4287	0.222	0.1330	No
37	Pik3cb	4420	0.217	0.1313	No
38	Nf2	4475	0.215	0.1336	No
39	Myh10	4477	0.215	0.1387	No
40	Gnai1	4690	0.204	0.1326	No
41	Ptprc	4730	0.201	0.1353	No
42	Skap2	4805	0.197	0.1362	No
43	Nectin4	4965	0.189	0.1324	No
44	Itgb4	5158	0.181	0.1268	No
45	Mapk14	5248	0.176	0.1264	No
46	Actn4	5687	0.154	0.1074	No
47	Cap1	5692	0.154	0.1108	No
48	Thy1	6023	0.137	0.0970	No
49	Insig1	6201	0.129	0.0910	No
50	Pkd1	6219	0.129	0.0932	No
51	Cntn1	6380	0.122	0.0878	No
52	Tial1	6582	0.114	0.0801	No
53	Pik3r3	6589	0.114	0.0825	No
54	Ctnnd1	6643	0.112	0.0824	No
55	Nectin1	6789	0.104	0.0774	No
56	Rasa1	6947	0.096	0.0716	No
57	Mvd	7023	0.093	0.0699	No
58	Baiap2	7222	0.085	0.0617	No
59	Actn2	7324	0.080	0.0583	No
60	Cldn4	7371	0.079	0.0579	No
61	Msn	7414	0.078	0.0575	No
62	Nrtn	7516	0.074	0.0541	No
63	Tspan4	7607	0.071	0.0511	No
64	Col16a1	7713	0.067	0.0473	No
65	Pecam1	7831	0.063	0.0427	No
66	Actb	7994	0.055	0.0357	No
67	Wasl	7995	0.055	0.0370	No
68	Nrxn2	8008	0.055	0.0376	No
69	Lama3	8297	0.043	0.0238	No
70	Arhgef6	8431	0.038	0.0178	No
71	Fbn1	8607	0.030	0.0095	No
72	Map3k20	8712	0.026	0.0047	No
73	Evl	8834	0.021	-0.0011	No
74	Lamb3	8865	0.019	-0.0021	No
75	Cdh6	8905	0.018	-0.0037	No
76	Ldlrap1	9281	0.006	-0.0230	No
77	Pten	9337	0.003	-0.0257	No
78	Nfasc	9428	0.000	-0.0304	No
79	Cdh8	9431	0.000	-0.0305	No
80	Dsc1	9762	-0.011	-0.0473	No
81	Kcnh2	9900	-0.017	-0.0540	No
82	Myl12b	9945	-0.019	-0.0558	No
83	Tmem8b	10263	-0.031	-0.0715	No
84	Akt3	10523	-0.042	-0.0839	No
85	Exoc4	10542	-0.042	-0.0838	No
86	Atp1a3	10553	-0.042	-0.0833	No
87	Rras	10567	-0.043	-0.0829	No
88	Sgce	10599	-0.044	-0.0835	No
89	Taok2	10937	-0.058	-0.0996	No
90	Rsu1	11117	-0.064	-0.1073	No
91	Cadm2	11143	-0.066	-0.1070	No
92	Actg1	11247	-0.069	-0.1107	No
93	Slit2	11443	-0.077	-0.1189	No
94	Hras	11466	-0.078	-0.1182	No
95	Vcl	11563	-0.082	-0.1212	No
96	Actn1	11659	-0.087	-0.1241	No
97	Tsc1	11757	-0.091	-0.1270	No
98	Mdk	11851	-0.096	-0.1295	No
99	Tro	12044	-0.104	-0.1370	No
100	Map4k2	12145	-0.108	-0.1396	No
101	Stx4a	12175	-0.109	-0.1385	No
102	Speg	12182	-0.109	-0.1362	No
103	Gnai2	12245	-0.112	-0.1367	No
104	Amh	12265	-0.112	-0.1350	No
105	Nrap	12324	-0.115	-0.1353	No
106	Lima1	12403	-0.118	-0.1365	No
107	Cldn7	12520	-0.123	-0.1396	No
108	Pals1	12888	-0.136	-0.1553	No
109	Nlgn3	13295	-0.155	-0.1726	No
110	Pard6g	13416	-0.161	-0.1750	No
111	Cd34	13515	-0.166	-0.1761	No
112	Syk	13760	-0.176	-0.1846	No
113	Mapk13	13990	-0.186	-0.1920	No
114	Thbs3	14058	-0.190	-0.1909	No
115	Irs1	14105	-0.192	-0.1887	No
116	Nf1	14292	-0.201	-0.1936	No
117	Cx3cl1	14390	-0.205	-0.1937	No
118	Icam2	14429	-0.207	-0.1908	No
119	Tubg1	14452	-0.209	-0.1869	No
120	Dlg1	14462	-0.209	-0.1825	No
121	Bmp1	14909	-0.232	-0.2000	No
122	Vcan	15051	-0.240	-0.2016	No
123	Src	15076	-0.241	-0.1971	No
124	Crat	15090	-0.242	-0.1921	No
125	Hadh	15175	-0.245	-0.1906	No
126	Sympk	15487	-0.262	-0.2004	No
127	Inppl1	15657	-0.272	-0.2027	No
128	Arpc2	15716	-0.276	-0.1992	No
129	Gamt	15738	-0.277	-0.1937	No
130	Itga10	15796	-0.281	-0.1900	No
131	Alox8	16178	-0.301	-0.2025	No
132	Nlgn2	16307	-0.309	-0.2018	No
133	Vasp	16401	-0.315	-0.1991	No
134	Zyx	16616	-0.328	-0.2024	No
135	Nectin3	16808	-0.341	-0.2042	Yes
136	Amigo1	16943	-0.351	-0.2028	Yes
137	Wnk4	17026	-0.356	-0.1985	Yes
138	Crb3	17036	-0.357	-0.1905	Yes
139	Icam5	17090	-0.361	-0.1847	Yes
140	Vwf	17268	-0.374	-0.1850	Yes
141	Icam4	17270	-0.374	-0.1761	Yes
142	Sdc3	17424	-0.386	-0.1749	Yes
143	Actn3	17705	-0.411	-0.1796	Yes
144	Cldn15	17768	-0.417	-0.1729	Yes
145	Cdh4	17878	-0.429	-0.1683	Yes
146	Sorbs3	18040	-0.446	-0.1661	Yes
147	Pbx2	18045	-0.447	-0.1557	Yes
148	Cnn2	18068	-0.449	-0.1461	Yes
149	Cdh11	18207	-0.465	-0.1422	Yes
150	Pfn1	18299	-0.477	-0.1356	Yes
151	Sirpa	18708	-0.542	-0.1438	Yes
152	Shroom2	18821	-0.564	-0.1362	Yes
153	Itga2	18846	-0.570	-0.1239	Yes
154	Cd276	18886	-0.580	-0.1122	Yes
155	Cercam	18889	-0.582	-0.0985	Yes
156	Rhof	19139	-0.664	-0.0956	Yes
157	Rac2	19172	-0.680	-0.0811	Yes
158	Nexn	19218	-0.701	-0.0668	Yes
159	Itga9	19228	-0.710	-0.0504	Yes
160	Cd86	19275	-0.741	-0.0352	Yes
161	Layn	19477	-0.976	-0.0224	Yes
162	Jup	19481	-1.018	0.0016	Yes