Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group2_versus_Group4.MPP_Pheno.cls#Group2_versus_Group4_repos
Phenotype	MPP_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.24677393
Normalized Enrichment Score (NES)	-1.1063738
Nominal p-value	0.26138613
FDR q-value	0.9855959
FWER p-Value	0.985

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Akt1	88	0.870	0.0183	No
2	Cd4	176	0.756	0.0337	No
3	Cd28	463	0.607	0.0349	No
4	Lif	483	0.601	0.0497	No
5	Abce1	756	0.537	0.0497	No
6	Ets1	844	0.524	0.0590	No
7	Il27ra	921	0.508	0.0684	No
8	Il10	972	0.502	0.0790	No
9	Cd79a	1224	0.463	0.0782	No
10	Brca1	1523	0.427	0.0741	No
11	Il4ra	1618	0.415	0.0801	No
12	Eif3a	1811	0.396	0.0806	No
13	Itk	1890	0.389	0.0868	No
14	Ccr1	2424	0.339	0.0682	No
15	Icam1	2452	0.337	0.0756	No
16	Cdkn2a	2493	0.334	0.0824	No
17	Il4	2797	0.311	0.0749	No
18	Tgfb2	2846	0.308	0.0805	No
19	Ifngr2	3075	0.296	0.0765	No
20	Bcl3	3179	0.288	0.0788	No
21	Zap70	3209	0.286	0.0848	No
22	Gpr65	3296	0.281	0.0877	No
23	Galnt1	3304	0.281	0.0947	No
24	Il18rap	3420	0.275	0.0960	No
25	Elane	3531	0.268	0.0974	No
26	Tlr2	3839	0.249	0.0881	No
27	Ube2n	3992	0.239	0.0865	No
28	Crtam	4161	0.229	0.0839	No
29	Stat1	4171	0.229	0.0894	No
30	Fas	4319	0.220	0.0876	No
31	Fgr	4397	0.218	0.0894	No
32	Prkcb	4586	0.209	0.0852	No
33	Ptprc	4730	0.201	0.0831	No
34	Flna	4907	0.192	0.0790	No
35	Prkcg	4933	0.190	0.0828	No
36	Ly75	5128	0.182	0.0775	No
37	Traf2	5200	0.178	0.0785	No
38	Fcgr2b	5454	0.165	0.0698	No
39	St8sia4	5517	0.161	0.0708	No
40	Ccr5	5771	0.150	0.0617	No
41	Icosl	5898	0.144	0.0590	No
42	Cd80	5981	0.139	0.0584	No
43	Thy1	6023	0.137	0.0599	No
44	Abi1	6047	0.136	0.0623	No
45	Hcls1	6293	0.125	0.0529	No
46	Nlrp3	6422	0.121	0.0495	No
47	Eif3j1	6451	0.120	0.0512	No
48	Nck1	6480	0.119	0.0529	No
49	Map3k7	6567	0.115	0.0515	No
50	Wars1	6684	0.109	0.0484	No
51	Acvr2a	6755	0.106	0.0475	No
52	Degs1	6829	0.102	0.0464	No
53	Irf4	7412	0.078	0.0184	No
54	Il2	7561	0.073	0.0127	No
55	Socs5	7873	0.060	-0.0018	No
56	Il7	8038	0.054	-0.0088	No
57	Srgn	8545	0.033	-0.0341	No
58	Jak2	8599	0.030	-0.0360	No
59	Cd74	8661	0.028	-0.0384	No
60	Hif1a	9076	0.013	-0.0595	No
61	Cd47	9118	0.011	-0.0613	No
62	Eif4g3	9131	0.010	-0.0617	No
63	Gcnt1	9350	0.003	-0.0728	No
64	Ly86	9611	-0.005	-0.0861	No
65	Il16	10309	-0.033	-0.1213	No
66	Ncf4	10624	-0.045	-0.1363	No
67	Npm1	10671	-0.046	-0.1374	No
68	Mrpl3	10689	-0.047	-0.1371	No
69	Ifngr1	10873	-0.055	-0.1451	No
70	Apbb1	10990	-0.060	-0.1495	No
71	Il12a	11150	-0.066	-0.1560	No
72	Csf1	11155	-0.066	-0.1545	No
73	Ikbkb	11220	-0.068	-0.1560	No
74	Igsf6	11327	-0.072	-0.1595	No
75	Mtif2	11358	-0.074	-0.1591	No
76	Cd247	11366	-0.074	-0.1576	No
77	Spi1	11499	-0.079	-0.1623	No
78	Map4k1	11747	-0.091	-0.1727	No
79	Tpd52	11756	-0.091	-0.1707	No
80	Ctss	11800	-0.093	-0.1705	No
81	Nme1	11923	-0.098	-0.1742	No
82	Ccr2	11978	-0.100	-0.1743	No
83	Was	12098	-0.106	-0.1777	No
84	Irf8	12238	-0.112	-0.1819	No
85	Stat4	12463	-0.121	-0.1903	No
86	Il11	12507	-0.122	-0.1893	No
87	Csk	12849	-0.134	-0.2034	No
88	H2-Aa	12911	-0.137	-0.2030	No
89	Itgb2	13030	-0.143	-0.2053	No
90	Lcp2	13096	-0.145	-0.2049	No
91	Dyrk3	13348	-0.158	-0.2137	No
92	Itgal	13362	-0.159	-0.2102	No
93	Glmn	13461	-0.163	-0.2109	No
94	Cxcr3	13463	-0.163	-0.2067	No
95	Psmb10	13522	-0.166	-0.2053	No
96	Eif3d	13739	-0.175	-0.2119	No
97	Tapbp	13775	-0.177	-0.2090	No
98	Ccnd3	13876	-0.181	-0.2095	No
99	Ptpn6	14039	-0.189	-0.2129	No
100	Il2rg	14181	-0.195	-0.2150	No
101	Hdac9	14244	-0.199	-0.2130	No
102	Ripk2	14426	-0.207	-0.2169	No
103	Tnf	14791	-0.225	-0.2298	No
104	Lyn	14874	-0.230	-0.2280	No
105	Cfp	14938	-0.233	-0.2251	No
106	Trat1	15060	-0.240	-0.2250	No
107	Ache	15206	-0.247	-0.2260	No
108	Cd96	15219	-0.248	-0.2201	No
109	Tlr1	15667	-0.273	-0.2360	No
110	Eif5a	15762	-0.279	-0.2336	No
111	Pf4	16019	-0.294	-0.2391	Yes
112	Rps9	16033	-0.295	-0.2320	Yes
113	Stab1	16160	-0.301	-0.2306	Yes
114	Cd40	16177	-0.301	-0.2235	Yes
115	Irf7	16223	-0.303	-0.2178	Yes
116	Tap2	16244	-0.305	-0.2108	Yes
117	Bcl10	16270	-0.307	-0.2041	Yes
118	Tgfb1	16282	-0.307	-0.1966	Yes
119	Ccl5	16319	-0.310	-0.1903	Yes
120	Tlr6	16370	-0.313	-0.1846	Yes
121	Rpl9	16536	-0.322	-0.1847	Yes
122	Il15	16988	-0.354	-0.1987	Yes
123	Ltb	17091	-0.361	-0.1945	Yes
124	Rps3a1	17289	-0.375	-0.1948	Yes
125	Lck	17337	-0.379	-0.1872	Yes
126	Tap1	17537	-0.397	-0.1871	Yes
127	Il18	17710	-0.412	-0.1851	Yes
128	F2r	17793	-0.420	-0.1783	Yes
129	Ifnar2	17964	-0.438	-0.1756	Yes
130	H2-DMa	17975	-0.440	-0.1646	Yes
131	Capg	17995	-0.442	-0.1539	Yes
132	Il12rb1	18067	-0.449	-0.1458	Yes
133	Tlr3	18100	-0.453	-0.1355	Yes
134	B2m	18217	-0.466	-0.1293	Yes
135	C2	18243	-0.470	-0.1182	Yes
136	Ube2d1	18295	-0.476	-0.1084	Yes
137	Bcat1	18417	-0.496	-0.1016	Yes
138	Socs1	18462	-0.502	-0.0907	Yes
139	Elf4	18545	-0.515	-0.0814	Yes
140	H2-Oa	18847	-0.570	-0.0819	Yes
141	Ccnd2	18993	-0.609	-0.0734	Yes
142	Cd1d2	19015	-0.616	-0.0583	Yes
143	H2-DMb2	19050	-0.630	-0.0435	Yes
144	Cd86	19275	-0.741	-0.0356	Yes
145	Rpl3l	19421	-0.872	-0.0202	Yes
146	H2-Ob	19469	-0.944	0.0022	Yes