DatasetMPP.MPP_Pheno.cls#Group2_versus_Group3.MPP_Pheno.cls#Group2_versus_Group3_repos
PhenotypeMPP_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_PROTEIN_SECRETION
Enrichment Score (ES)0.3945682
Normalized Enrichment Score (NES)1.7875534
Nominal p-value0.025490196
FDR q-value0.08360374
FWER p-Value0.064
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PROTEIN_SECRETION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Abca11000.7690.0403Yes
2Yipf61110.7550.0844Yes
3Rps6ka31380.7280.1262Yes
4Napg2390.6420.1590Yes
5Dst7140.4990.1641Yes
6Atp1a17610.4880.1906Yes
7Zw109900.4520.2056Yes
8Atp6v1h10570.4440.2285Yes
9Stx1212920.4150.2410Yes
10Arf115900.3820.2483Yes
11Lamp217510.3670.2618Yes
12Cltc20210.3460.2685Yes
13Sh3gl220830.3420.2856Yes
14Scrn122960.3250.2939Yes
15Gla29780.2790.2753Yes
16Stam31290.2700.2836Yes
17Arfip133840.2520.2854Yes
18Sgms136970.2350.2832Yes
19Cog240400.2180.2785Yes
20Vps4b43670.2010.2736Yes
21Anp32e43720.2010.2853Yes
22Rab5a44610.1970.2924Yes
23Copb245110.1940.3013Yes
24Ap2b145620.1910.3101Yes
25Kif1b45730.1910.3208Yes
26Golga445980.1900.3308Yes
27Cav246910.1850.3370Yes
28Snap2348970.1740.3368Yes
29Adam1049670.1720.3434Yes
30Ap3b151420.1640.3441Yes
31Cope51730.1620.3521Yes
32Ppt151990.1610.3603Yes
33Cd6353320.1530.3626Yes
34Dnm1l54100.1500.3675Yes
35Scamp355220.1440.3703Yes
36Ica155250.1440.3788Yes
37Pam56170.1400.3824Yes
38Arfgef259100.1290.3750Yes
39Lman159320.1270.3814Yes
40Sec31a59690.1250.3869Yes
41Ap1g161190.1200.3864Yes
42Arfgef161840.1170.3900Yes
43Copb163150.1110.3899Yes
44Uso164410.1060.3897Yes
45Snx266170.0980.3865Yes
46Mon267110.0950.3874Yes
47Vps4567150.0950.3928Yes
48Tom1l169280.0860.3870Yes
49Rer169460.0860.3912Yes
50Mapk169780.0840.3946Yes
51Ap2m172480.0750.3851No
52Tpd5275940.0620.3711No
53Vamp478120.0540.3631No
54Rab2a84620.0290.3314No
55Ap3s186380.0220.3237No
56Stx1686900.0200.3223No
57M6pr88100.0170.3172No
58Clta88880.0140.3140No
59Sspn92750.0000.2941No
60Rab149439-0.0050.2860No
61Ykt69463-0.0060.2852No
62Tspan89567-0.0100.2804No
63Arcn19583-0.0100.2803No
64Arfgap39614-0.0110.2794No
65Gosr210166-0.0310.2529No
66Ocrl10234-0.0340.2514No
67Sec22b10256-0.0350.2524No
68Scamp110294-0.0360.2526No
69Galc10415-0.0410.2488No
70Napa10770-0.0530.2337No
71Rab22a10846-0.0570.2332No
72Tsg10111005-0.0610.2287No
73Atp7a11411-0.0770.2124No
74Rab911589-0.0830.2082No
75Vamp311592-0.0830.2130No
76Gbf111688-0.0870.2133No
77Ergic311941-0.0970.2061No
78Clcn311953-0.0970.2112No
79Bnip311974-0.0990.2161No
80Cln512230-0.1090.2094No
81Ctsc12710-0.1290.1923No
82Krt1813076-0.1430.1820No
83Tmed1013266-0.1510.1812No
84Dop1a13550-0.1640.1763No
85Sod114177-0.1900.1553No
86Igf2r14869-0.2240.1330No
87Tmx115198-0.2390.1302No
88Sec24d15317-0.2470.1388No
89Bet116382-0.3090.1022No
90Gnas16630-0.3240.1087No
91Ap2s116635-0.3250.1277No
92Stx716917-0.3450.1336No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PROTEIN_SECRETION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PROTEIN_SECRETION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PROTEIN_SECRETION