Details for gene set HALLMARK_P53

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group2_versus_Group3.MPP_Pheno.cls#Group2_versus_Group3_repos
Phenotype	MPP_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_P53_PATHWAY
Enrichment Score (ES)	-0.20882851
Normalized Enrichment Score (NES)	-0.89770365
Nominal p-value	0.6080508
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Csrnp2	87	0.788	0.0126	No
2	Fos	154	0.699	0.0243	No
3	Ak1	165	0.688	0.0387	No
4	Lif	337	0.601	0.0429	No
5	Acvr1b	391	0.581	0.0527	No
6	Plxnb2	445	0.569	0.0623	No
7	Rab40c	514	0.549	0.0707	No
8	Zmat3	607	0.527	0.0773	No
9	Eps8l2	843	0.474	0.0754	No
10	Gls2	876	0.467	0.0839	No
11	Jun	923	0.462	0.0915	No
12	Ada	1016	0.449	0.0965	No
13	Hexim1	1134	0.434	0.0999	No
14	Rad9a	1186	0.428	0.1065	No
15	Txnip	1212	0.424	0.1144	No
16	Rrp8	1262	0.419	0.1209	No
17	App	1302	0.414	0.1279	No
18	Ppp1r15a	1660	0.376	0.1175	No
19	Prmt2	1761	0.367	0.1203	No
20	H2ac25	1812	0.361	0.1255	No
21	Ccnd3	1890	0.356	0.1293	No
22	Pcna	1921	0.355	0.1354	No
23	Hbegf	1987	0.349	0.1396	No
24	Vwa5a	2001	0.348	0.1465	No
25	Baiap2	2168	0.335	0.1451	No
26	Ddit3	2183	0.335	0.1517	No
27	Perp	2237	0.329	0.1561	No
28	Elp1	2275	0.327	0.1612	No
29	Tspyl2	2316	0.324	0.1662	No
30	Ccp110	2361	0.320	0.1709	No
31	Sdc1	2654	0.301	0.1623	No
32	Coq8a	2734	0.296	0.1646	No
33	Aen	2746	0.295	0.1704	No
34	H1f2	2852	0.288	0.1712	No
35	Stom	3185	0.266	0.1598	No
36	Mdm2	3238	0.262	0.1628	No
37	Cdkn1a	4008	0.219	0.1278	No
38	Cd82	4053	0.217	0.1302	No
39	Cdk5r1	4207	0.210	0.1268	No
40	Kif13b	4474	0.196	0.1173	No
41	Btg1	4483	0.195	0.1211	No
42	Rxra	4664	0.187	0.1158	No
43	Abcc5	4670	0.186	0.1196	No
44	Mapkapk3	5100	0.165	0.1010	No
45	Apaf1	5141	0.164	0.1025	No
46	Sat1	5185	0.161	0.1037	No
47	Slc35d1	5239	0.158	0.1044	No
48	Rad51c	5458	0.147	0.0963	No
49	S100a4	5517	0.145	0.0965	No
50	Fbxw7	5572	0.142	0.0968	No
51	Slc3a2	5706	0.136	0.0928	No
52	Slc19a2	5938	0.127	0.0836	No
53	Sec61a1	5954	0.126	0.0856	No
54	Rhbdf2	6197	0.117	0.0756	No
55	Jag2	6427	0.107	0.0661	No
56	Tsc22d1	6462	0.105	0.0666	No
57	Polh	6495	0.103	0.0672	No
58	Foxo3	6643	0.098	0.0617	No
59	Atf3	6651	0.098	0.0634	No
60	Nol8	6874	0.088	0.0538	No
61	Ip6k2	6902	0.087	0.0543	No
62	Hmox1	7062	0.081	0.0479	No
63	Nupr1	7084	0.080	0.0485	No
64	Ier5	7109	0.080	0.0490	No
65	Ccng1	7196	0.077	0.0462	No
66	Pmm1	7337	0.072	0.0405	No
67	Abhd4	7462	0.067	0.0356	No
68	Sfn	7505	0.065	0.0348	No
69	Xpc	7551	0.064	0.0339	No
70	Blcap	7635	0.061	0.0309	No
71	Wwp1	7862	0.052	0.0203	No
72	S100a10	7878	0.052	0.0207	No
73	Ier3	7906	0.050	0.0204	No
74	Zfp365	8357	0.033	-0.0022	No
75	Rb1	8412	0.031	-0.0043	No
76	Rap2b	8557	0.025	-0.0112	No
77	Ifi30	8935	0.013	-0.0304	No
78	Ctsd	8944	0.012	-0.0306	No
79	Slc7a11	8946	0.012	-0.0304	No
80	Sertad3	8985	0.011	-0.0321	No
81	Ctsf	9033	0.009	-0.0343	No
82	Pdgfa	9105	0.007	-0.0379	No
83	Cdh13	9195	0.003	-0.0424	No
84	Procr	9209	0.003	-0.0430	No
85	Cgrrf1	9336	-0.001	-0.0495	No
86	Hspa4l	9492	-0.007	-0.0574	No
87	Triap1	10087	-0.028	-0.0875	No
88	Plk3	10090	-0.028	-0.0870	No
89	Ddb2	10172	-0.031	-0.0905	No
90	Trafd1	10257	-0.035	-0.0941	No
91	Sp1	10573	-0.047	-0.1094	No
92	Mknk2	10606	-0.048	-0.1100	No
93	Itgb4	10921	-0.059	-0.1250	No
94	Fas	10999	-0.061	-0.1276	No
95	Trp53	11041	-0.063	-0.1284	No
96	Tap1	11244	-0.071	-0.1373	No
97	Pidd1	11247	-0.071	-0.1359	No
98	Cdkn2a	11276	-0.072	-0.1358	No
99	Dnttip2	11380	-0.076	-0.1395	No
100	Ninj1	11438	-0.078	-0.1407	No
101	Epha2	11522	-0.080	-0.1433	No
102	Plk2	11690	-0.087	-0.1501	No
103	Pom121	11762	-0.091	-0.1518	No
104	Zfp36l1	11765	-0.091	-0.1499	No
105	H2aj	11904	-0.095	-0.1550	No
106	Tax1bp3	11984	-0.099	-0.1569	No
107	Pvt1	12008	-0.100	-0.1559	No
108	Cyfip2	12027	-0.101	-0.1546	No
109	Traf4	12063	-0.102	-0.1542	No
110	Phlda3	12292	-0.112	-0.1636	No
111	Zbtb16	12324	-0.113	-0.1628	No
112	Rpl36	12382	-0.116	-0.1632	No
113	Ei24	12454	-0.118	-0.1643	No
114	Hras	12554	-0.123	-0.1668	No
115	Ptpn14	12857	-0.135	-0.1795	No
116	Klk8	12924	-0.138	-0.1799	No
117	Bax	12965	-0.139	-0.1790	No
118	Wrap73	13025	-0.141	-0.1790	No
119	Casp1	13238	-0.149	-0.1867	No
120	Ddit4	13242	-0.149	-0.1836	No
121	Irak1	13290	-0.152	-0.1828	No
122	Tnfsf9	13340	-0.154	-0.1820	No
123	Ppm1d	13391	-0.156	-0.1812	No
124	Hint1	13460	-0.159	-0.1813	No
125	Cebpa	13523	-0.162	-0.1810	No
126	Gadd45a	13667	-0.169	-0.1847	No
127	Trp63	13959	-0.181	-0.1958	No
128	Rps12	13990	-0.182	-0.1934	No
129	Irag2	14106	-0.187	-0.1953	No
130	Vamp8	14351	-0.198	-0.2037	Yes
131	Fdxr	14383	-0.200	-0.2009	Yes
132	Fgf13	14442	-0.203	-0.1995	Yes
133	Dram1	14598	-0.210	-0.2030	Yes
134	Btg2	14644	-0.213	-0.2007	Yes
135	Ralgds	14659	-0.214	-0.1968	Yes
136	Prkab1	14669	-0.214	-0.1926	Yes
137	Gm2a	14729	-0.217	-0.1910	Yes
138	Rpl18	14747	-0.218	-0.1871	Yes
139	Pitpnc1	14895	-0.225	-0.1899	Yes
140	Rack1	15034	-0.232	-0.1920	Yes
141	Nudt15	15124	-0.236	-0.1915	Yes
142	Iscu	15178	-0.238	-0.1891	Yes
143	Hdac3	15388	-0.249	-0.1945	Yes
144	Dgka	15472	-0.254	-0.1933	Yes
145	Dcxr	15541	-0.258	-0.1912	Yes
146	Rps27l	15694	-0.267	-0.1933	Yes
147	Vdr	15712	-0.267	-0.1884	Yes
148	Tgfa	16100	-0.290	-0.2021	Yes
149	Upp1	16231	-0.298	-0.2024	Yes
150	Tpd52l1	16261	-0.300	-0.1974	Yes
151	Notch1	16312	-0.304	-0.1934	Yes
152	Rrad	16404	-0.310	-0.1913	Yes
153	Def6	16540	-0.319	-0.1914	Yes
154	Ccnk	16726	-0.332	-0.1938	Yes
155	Retsat	16801	-0.337	-0.1903	Yes
156	Socs1	16853	-0.340	-0.1856	Yes
157	Ptpre	16862	-0.341	-0.1786	Yes
158	Fuca1	16898	-0.343	-0.1730	Yes
159	Tgfb1	16902	-0.344	-0.1657	Yes
160	Sphk1	16923	-0.346	-0.1592	Yes
161	Ndrg1	17084	-0.356	-0.1598	Yes
162	Sesn1	17144	-0.361	-0.1550	Yes
163	Mxd4	17225	-0.366	-0.1512	Yes
164	F2r	17405	-0.380	-0.1523	Yes
165	Mxd1	17528	-0.394	-0.1500	Yes
166	Ercc5	17552	-0.396	-0.1427	Yes
167	Rnf19b	17572	-0.399	-0.1350	Yes
168	Bak1	17577	-0.399	-0.1266	Yes
169	Fam162a	17586	-0.401	-0.1183	Yes
170	Cd81	17728	-0.413	-0.1166	Yes
171	Klf4	17911	-0.433	-0.1167	Yes
172	Cdkn2aip	17980	-0.442	-0.1106	Yes
173	Ephx1	17993	-0.443	-0.1016	Yes
174	Rchy1	18087	-0.455	-0.0966	Yes
175	Osgin1	18341	-0.484	-0.0992	Yes
176	Tprkb	18451	-0.500	-0.0940	Yes
177	Abat	18508	-0.510	-0.0858	Yes
178	Tcn2	18622	-0.528	-0.0802	Yes
179	Tob1	18695	-0.542	-0.0722	Yes
180	Ankra2	18707	-0.544	-0.0610	Yes
181	Steap3	18773	-0.554	-0.0524	Yes
182	St14	18777	-0.555	-0.0405	Yes
183	Tm7sf3	19088	-0.636	-0.0428	Yes
184	Ldhb	19149	-0.667	-0.0314	Yes
185	Alox8	19156	-0.671	-0.0172	Yes
186	Ccnd2	19194	-0.684	-0.0043	Yes
187	Trib3	19471	-0.954	0.0021	Yes