Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group2_versus_Group3.MPP_Pheno.cls#Group2_versus_Group3_repos
Phenotype	MPP_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	-0.29517668
Normalized Enrichment Score (NES)	-1.145016
Nominal p-value	0.23849373
FDR q-value	1.0
FWER p-Value	0.966

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Sparc	104	0.766	0.0150	No
2	Ak1	165	0.688	0.0302	No
3	Bhlhe40	304	0.614	0.0394	No
4	Cfd	363	0.593	0.0521	No
5	Plxnb2	445	0.569	0.0631	No
6	Sptan1	571	0.535	0.0708	No
7	Atp2a1	616	0.525	0.0825	No
8	Camk2b	679	0.508	0.0928	No
9	Eif4a2	1105	0.438	0.0825	No
10	Gabarapl2	1236	0.422	0.0870	No
11	Ctf1	1283	0.416	0.0957	No
12	App	1302	0.414	0.1058	No
13	Wwtr1	1357	0.407	0.1138	No
14	Flii	1549	0.387	0.1142	No
15	Sh3bgr	1707	0.371	0.1160	No
16	Akt2	1823	0.361	0.1196	No
17	Col4a2	1983	0.349	0.1207	No
18	Hbegf	1987	0.349	0.1298	No
19	Adam12	2043	0.344	0.1361	No
20	Lpin1	2362	0.320	0.1282	No
21	Eno3	2491	0.312	0.1299	No
22	Igf1	2566	0.307	0.1343	No
23	Nqo1	2833	0.289	0.1282	No
24	Mybpc3	2915	0.284	0.1316	No
25	Fkbp1b	2961	0.282	0.1368	No
26	Itgb1	3573	0.242	0.1116	No
27	Myh9	3658	0.237	0.1136	No
28	Pkia	3924	0.223	0.1059	No
29	Cdkn1a	4008	0.219	0.1074	No
30	Sirt2	4217	0.209	0.1022	No
31	Pfkm	4275	0.206	0.1047	No
32	Ldb3	4334	0.203	0.1071	No
33	Actn3	4455	0.197	0.1062	No
34	Ablim1	4686	0.186	0.0993	No
35	Tnnt1	4697	0.185	0.1037	No
36	Foxo4	4795	0.180	0.1034	No
37	Atp6ap1	4869	0.176	0.1043	No
38	Sorbs1	5193	0.161	0.0919	No
39	Tnni2	5236	0.158	0.0940	No
40	Mylk	5448	0.148	0.0870	No
41	Myl4	5591	0.141	0.0835	No
42	Ifrd1	5678	0.138	0.0827	No
43	Bag1	5717	0.136	0.0843	No
44	Cd36	5777	0.134	0.0848	No
45	Col1a1	5884	0.130	0.0828	No
46	Myo1c	5896	0.129	0.0857	No
47	Pde4dip	6101	0.121	0.0784	No
48	Lsp1	6358	0.109	0.0681	No
49	Psen2	6730	0.094	0.0514	No
50	Nos1	6881	0.088	0.0460	No
51	Mylpf	6991	0.083	0.0426	No
52	Nav2	7031	0.082	0.0428	No
53	Dapk2	7182	0.078	0.0371	No
54	Tsc2	7318	0.072	0.0320	No
55	Tpm3	7319	0.072	0.0340	No
56	Slc6a8	7374	0.070	0.0330	No
57	Svil	7489	0.066	0.0289	No
58	Rb1	8412	0.031	-0.0178	No
59	Agl	8631	0.022	-0.0285	No
60	Mef2a	8693	0.020	-0.0311	No
61	Mapre3	8938	0.013	-0.0434	No
62	Syngr2	9174	0.004	-0.0554	No
63	Cdh13	9195	0.003	-0.0563	No
64	Efs	9272	0.000	-0.0602	No
65	Sspn	9275	0.000	-0.0604	No
66	Actn2	9397	-0.003	-0.0665	No
67	Large1	9417	-0.004	-0.0674	No
68	Gpx3	9444	-0.005	-0.0686	No
69	Aebp1	9464	-0.006	-0.0694	No
70	Fdps	9592	-0.011	-0.0757	No
71	Cryab	9721	-0.015	-0.0819	No
72	Agrn	10049	-0.027	-0.0981	No
73	Dtna	10113	-0.029	-0.1006	No
74	Prnp	10194	-0.032	-0.1038	No
75	Myl6b	10622	-0.048	-0.1246	No
76	Acsl1	10634	-0.048	-0.1239	No
77	Itgb4	10921	-0.059	-0.1371	No
78	Tpm2	10983	-0.060	-0.1386	No
79	Ptp4a3	11040	-0.063	-0.1398	No
80	Mras	11392	-0.076	-0.1559	No
81	Ache	12094	-0.103	-0.1894	No
82	Mef2d	12249	-0.110	-0.1944	No
83	Kcnh1	12253	-0.110	-0.1916	No
84	Mapk12	12788	-0.132	-0.2157	No
85	Speg	12797	-0.132	-0.2126	No
86	Reep1	13256	-0.150	-0.2322	No
87	Csrp3	13414	-0.157	-0.2361	No
88	Hspb8	13526	-0.162	-0.2376	No
89	Rit1	13527	-0.162	-0.2332	No
90	Erbb3	13547	-0.164	-0.2299	No
91	Gaa	13594	-0.165	-0.2278	No
92	Gadd45b	13957	-0.181	-0.2417	No
93	Myh11	14296	-0.196	-0.2539	No
94	Dmpk	14399	-0.201	-0.2539	No
95	Schip1	15146	-0.237	-0.2861	No
96	Sh2b1	15282	-0.245	-0.2865	No
97	Hdac5	15320	-0.247	-0.2819	No
98	Igfbp7	15328	-0.247	-0.2757	No
99	Gja5	15707	-0.267	-0.2881	Yes
100	Chrnb1	15728	-0.268	-0.2820	Yes
101	Bin1	15762	-0.270	-0.2765	Yes
102	Adcy9	15783	-0.271	-0.2704	Yes
103	Ryr1	15980	-0.282	-0.2730	Yes
104	Crat	16066	-0.287	-0.2697	Yes
105	Tpd52l1	16261	-0.300	-0.2718	Yes
106	Sgcd	16273	-0.301	-0.2643	Yes
107	Notch1	16312	-0.304	-0.2582	Yes
108	Gnao1	16564	-0.320	-0.2627	Yes
109	Clu	16584	-0.321	-0.2551	Yes
110	Tgfb1	16902	-0.344	-0.2623	Yes
111	Sphk1	16923	-0.346	-0.2542	Yes
112	Tagln	16929	-0.346	-0.2452	Yes
113	Stc2	16957	-0.348	-0.2374	Yes
114	Fgf2	17073	-0.355	-0.2339	Yes
115	Ppfia4	17153	-0.361	-0.2283	Yes
116	Fhl1	17174	-0.362	-0.2197	Yes
117	Pcx	17399	-0.380	-0.2212	Yes
118	Ocel1	17481	-0.389	-0.2151	Yes
119	Dmd	17495	-0.390	-0.2054	Yes
120	Itgb5	17549	-0.395	-0.1976	Yes
121	Mef2c	17965	-0.439	-0.2073	Yes
122	Vipr1	18244	-0.473	-0.2091	Yes
123	Tnnc1	18264	-0.476	-0.1974	Yes
124	Pygm	18328	-0.483	-0.1878	Yes
125	Sorbs3	18477	-0.504	-0.1821	Yes
126	Kcnh2	18565	-0.518	-0.1728	Yes
127	Ncam1	18724	-0.546	-0.1664	Yes
128	Cnn3	18872	-0.578	-0.1587	Yes
129	Gsn	18896	-0.583	-0.1444	Yes
130	Ckb	18922	-0.591	-0.1300	Yes
131	Cox7a1	18974	-0.602	-0.1166	Yes
132	Pick1	19013	-0.611	-0.1023	Yes
133	Tnnt3	19045	-0.622	-0.0874	Yes
134	Smtn	19090	-0.637	-0.0727	Yes
135	Klf5	19153	-0.670	-0.0581	Yes
136	Myom1	19164	-0.674	-0.0407	Yes
137	Pdlim7	19165	-0.674	-0.0228	Yes
138	Kifc3	19309	-0.754	-0.0101	Yes
139	Lama2	19347	-0.774	0.0085	Yes