Details for gene set HALLMARK_TGF_BETA

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group1_versus_Group4.MPP_Pheno.cls#Group1_versus_Group4_repos
Phenotype	MPP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)	-0.26590687
Normalized Enrichment Score (NES)	-1.190692
Nominal p-value	0.23658052
FDR q-value	0.51010966
FWER p-Value	0.968

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Bmpr1a	274	0.677	0.0411	No
2	Ppm1a	386	0.625	0.0863	No
3	Sptbn1	1184	0.464	0.0832	No
4	Slc20a1	1291	0.450	0.1145	No
5	Ctnnb1	1767	0.399	0.1226	No
6	Cdh1	1806	0.396	0.1530	No
7	Id2	2015	0.377	0.1730	No
8	Id1	2785	0.315	0.1592	No
9	Ncor2	3670	0.259	0.1349	No
10	Furin	4262	0.224	0.1228	No
11	Hdac1	4387	0.218	0.1342	No
12	Smad3	4426	0.216	0.1498	No
13	Skil	5439	0.167	0.1114	No
14	Rhoa	5986	0.141	0.0949	No
15	Fkbp1a	6381	0.122	0.0846	No
16	Ltbp2	6536	0.115	0.0861	No
17	Trim33	6621	0.114	0.0911	No
18	Ski	6647	0.113	0.0990	No
19	Ube2d3	6741	0.109	0.1031	No
20	Thbs1	7292	0.087	0.0819	No
21	Map3k7	7415	0.082	0.0824	No
22	Ppp1r15a	7423	0.082	0.0887	No
23	Klf10	7609	0.074	0.0852	No
24	Hipk2	7759	0.066	0.0829	No
25	Smurf2	7862	0.061	0.0826	No
26	Xiap	8460	0.038	0.0550	No
27	Pmepa1	8467	0.037	0.0577	No
28	Smad6	8865	0.021	0.0390	No
29	Fnta	9289	0.003	0.0175	No
30	Apc	9566	-0.004	0.0037	No
31	Cdk9	9632	-0.006	0.0009	No
32	Bmpr2	10247	-0.031	-0.0282	No
33	Smad1	11609	-0.085	-0.0911	No
34	Rab31	11848	-0.096	-0.0955	No
35	Acvr1	11905	-0.099	-0.0904	No
36	Arid4b	13302	-0.162	-0.1489	No
37	Tgfbr1	14151	-0.201	-0.1761	No
38	Bcar3	14365	-0.211	-0.1699	No
39	Cdkn1c	14489	-0.217	-0.1585	No
40	Ifngr2	15349	-0.261	-0.1814	No
41	Tjp1	16995	-0.372	-0.2356	Yes
42	Junb	17071	-0.378	-0.2086	Yes
43	Tgfb1	17218	-0.390	-0.1843	Yes
44	Eng	17627	-0.426	-0.1705	Yes
45	Smurf1	18161	-0.484	-0.1585	Yes
46	Smad7	18162	-0.484	-0.1190	Yes
47	Tgif1	18605	-0.549	-0.0970	Yes
48	Ppp1ca	19348	-0.804	-0.0697	Yes
49	Wwtr1	19450	-0.958	0.0032	Yes