DatasetMPP.MPP_Pheno.cls#Group1_versus_Group4.MPP_Pheno.cls#Group1_versus_Group4_repos
PhenotypeMPP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.34895667
Normalized Enrichment Score (NES)-1.2252988
Nominal p-value0.21135029
FDR q-value0.5078144
FWER p-Value0.944
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gpx47770.5280.0068No
2Txnrd217110.405-0.0053No
3Gpx317710.3990.0270No
4Scaf420490.3740.0458No
5Prnp23410.3500.0619No
6Ptpa28340.3130.0643No
7Hhex28650.3110.0903No
8Glrx232590.2880.0956No
9Txnrd141620.2310.0696No
10Fes47190.2020.0589No
11Ipcef155350.1630.0315No
12Pfkp72140.090-0.0467No
13Srxn174200.082-0.0500No
14Oxsr174280.081-0.0432No
15Prdx675750.075-0.0441No
16Mbp78630.061-0.0534No
17Hmox278710.061-0.0484No
18Abcc182990.044-0.0665No
19Glrx84850.036-0.0728No
20Ndufs285320.034-0.0721No
21Egln287770.024-0.0825No
22Prdx49648-0.007-0.1266No
23Ercc29825-0.014-0.1344No
24Gsr10135-0.026-0.1480No
25Lsp110176-0.028-0.1476No
26Cdkn2d10248-0.031-0.1485No
27Cat10815-0.053-0.1729No
28Msra10868-0.055-0.1707No
29Lamtor511038-0.062-0.1740No
30G6pdx12656-0.134-0.2452No
31Ftl113782-0.183-0.2868No
32Gclm14381-0.211-0.2988No
33Atox115358-0.262-0.3258Yes
34Gclc15382-0.263-0.3038Yes
35Stk2515433-0.266-0.2828Yes
36Mgst115624-0.279-0.2679Yes
37Mpo15762-0.288-0.2494Yes
38Sbno216301-0.320-0.2487Yes
39Sod116535-0.335-0.2311Yes
40Junb17071-0.378-0.2251Yes
41Selenos17360-0.402-0.2044Yes
42Txn117484-0.412-0.1742Yes
43Nqo117693-0.431-0.1468Yes
44Sod217813-0.444-0.1136Yes
45Pdlim117862-0.451-0.0762Yes
46Prdx118399-0.522-0.0576Yes
47Ndufa618474-0.532-0.0143Yes
48Prdx219287-0.7640.0116Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY