Details for gene set HALLMARK_EPITHELIAL_MESENCHYMAL

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group1_versus_Group4.MPP_Pheno.cls#Group1_versus_Group4_repos
Phenotype	MPP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION
Enrichment Score (ES)	-0.22634567
Normalized Enrichment Score (NES)	-0.97249
Nominal p-value	0.5285996
FDR q-value	0.8427614
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Jun	335	0.643	0.0000	No
2	Eno2	415	0.613	0.0125	No
3	Nt5e	481	0.595	0.0251	No
4	Fgf2	611	0.564	0.0337	No
5	Gpc1	895	0.507	0.0327	No
6	Slc6a8	928	0.500	0.0446	No
7	Efemp2	1181	0.465	0.0441	No
8	Gpx7	1223	0.459	0.0543	No
9	Lama1	1457	0.433	0.0540	No
10	Notch2	1619	0.414	0.0568	No
11	Slit2	1660	0.410	0.0658	No
12	Pfn2	1826	0.395	0.0679	No
13	Tnfaip3	1862	0.392	0.0767	No
14	Col11a1	1894	0.389	0.0855	No
15	Id2	2015	0.377	0.0895	No
16	Dcn	2089	0.369	0.0957	No
17	Mmp2	2436	0.342	0.0870	No
18	Serpine2	2515	0.335	0.0920	No
19	Bgn	2527	0.333	0.1004	No
20	Itgb1	2545	0.331	0.1085	No
21	Copa	2588	0.329	0.1152	No
22	Plod2	2669	0.322	0.1197	No
23	Flna	2687	0.321	0.1275	No
24	Col16a1	2728	0.319	0.1340	No
25	Fbln1	2924	0.307	0.1323	No
26	Lama2	2946	0.306	0.1394	No
27	Calu	3022	0.304	0.1437	No
28	Colgalt1	3136	0.296	0.1459	No
29	Abi3bp	3168	0.294	0.1522	No
30	Gja1	3192	0.293	0.1589	No
31	Adam12	3248	0.289	0.1639	No
32	Sntb1	3490	0.272	0.1588	No
33	Nid2	3917	0.243	0.1433	No
34	Itgb3	4322	0.221	0.1284	No
35	Sdc1	4353	0.219	0.1328	No
36	Vcam1	4428	0.215	0.1348	No
37	Plaur	4597	0.207	0.1317	No
38	Matn2	4757	0.200	0.1288	No
39	Tagln	4785	0.199	0.1328	No
40	Fas	5015	0.186	0.1260	No
41	Mmp14	5324	0.174	0.1148	No
42	Sgcd	5427	0.168	0.1140	No
43	Cap2	5499	0.165	0.1148	No
44	Cald1	5502	0.165	0.1192	No
45	Timp3	5552	0.162	0.1210	No
46	Ntm	5572	0.162	0.1244	No
47	Col8a2	5730	0.154	0.1204	No
48	Fuca1	5791	0.150	0.1213	No
49	Qsox1	5831	0.148	0.1233	No
50	Ecm2	5973	0.142	0.1199	No
51	Vegfa	6249	0.128	0.1091	No
52	Fn1	6287	0.126	0.1106	No
53	Dst	6341	0.124	0.1112	No
54	Fstl3	6516	0.116	0.1054	No
55	Sfrp4	6798	0.108	0.0938	No
56	Mcm7	6972	0.100	0.0875	No
57	Rhob	7099	0.095	0.0836	No
58	Fbn1	7152	0.093	0.0834	No
59	Thbs1	7292	0.087	0.0786	No
60	Itgb5	7327	0.086	0.0791	No
61	Cd44	7361	0.084	0.0797	No
62	Lamc1	7362	0.084	0.0819	No
63	P3h1	7382	0.083	0.0832	No
64	Sat1	7584	0.075	0.0748	No
65	Gem	7986	0.057	0.0557	No
66	Sdc4	8193	0.049	0.0463	No
67	Cadm1	8318	0.043	0.0411	No
68	Pmepa1	8467	0.037	0.0345	No
69	Itgav	8512	0.035	0.0331	No
70	Itga2	8543	0.033	0.0325	No
71	Gadd45b	8650	0.029	0.0278	No
72	Col4a1	9097	0.011	0.0051	No
73	Col5a2	9371	0.000	-0.0090	No
74	Cxcl12	9389	0.000	-0.0099	No
75	Sfrp1	9441	-0.000	-0.0125	No
76	Edil3	9916	-0.018	-0.0365	No
77	Anpep	10076	-0.024	-0.0440	No
78	Fstl1	10170	-0.027	-0.0481	No
79	Magee1	10211	-0.029	-0.0494	No
80	Col5a3	10387	-0.037	-0.0574	No
81	Vegfc	10616	-0.045	-0.0680	No
82	Ecm1	10708	-0.048	-0.0714	No
83	Lrp1	11045	-0.062	-0.0870	No
84	Fzd8	11990	-0.102	-0.1330	No
85	Mylk	12203	-0.111	-0.1410	No
86	Pcolce	12495	-0.127	-0.1526	No
87	Wipf1	12544	-0.129	-0.1516	No
88	Postn	12554	-0.130	-0.1485	No
89	Thbs2	12861	-0.141	-0.1605	No
90	Loxl1	12879	-0.142	-0.1576	No
91	Cdh2	12915	-0.144	-0.1555	No
92	Col1a1	12996	-0.147	-0.1557	No
93	Slit3	13389	-0.167	-0.1714	No
94	Sparc	13594	-0.176	-0.1772	No
95	Dab2	13655	-0.179	-0.1755	No
96	Itga5	13788	-0.183	-0.1774	No
97	Plod3	13890	-0.188	-0.1775	No
98	Pdlim4	14049	-0.196	-0.1804	No
99	Col7a1	14269	-0.205	-0.1862	No
100	Gadd45a	14418	-0.213	-0.1881	No
101	Tnfrsf12a	14565	-0.221	-0.1897	No
102	Cdh6	14575	-0.221	-0.1842	No
103	Tpm1	15245	-0.255	-0.2118	No
104	Tfpi2	15527	-0.272	-0.2190	Yes
105	Tpm4	15539	-0.273	-0.2122	Yes
106	Plod1	15676	-0.282	-0.2116	Yes
107	Col5a1	15787	-0.290	-0.2095	Yes
108	Cdh11	15879	-0.295	-0.2063	Yes
109	Tgm2	15880	-0.295	-0.1983	Yes
110	Pvr	16053	-0.305	-0.1990	Yes
111	Vim	16077	-0.307	-0.1919	Yes
112	Col1a2	16217	-0.314	-0.1906	Yes
113	Il15	16299	-0.320	-0.1862	Yes
114	Pdgfrb	16369	-0.324	-0.1810	Yes
115	Tgfbi	16401	-0.325	-0.1739	Yes
116	Glipr1	16426	-0.326	-0.1663	Yes
117	Serpinh1	16546	-0.336	-0.1634	Yes
118	Mest	16562	-0.337	-0.1551	Yes
119	Ppib	16584	-0.338	-0.1471	Yes
120	Fap	16591	-0.339	-0.1382	Yes
121	Bmp1	16621	-0.342	-0.1305	Yes
122	Basp1	16989	-0.371	-0.1395	Yes
123	Tgfbr3	17125	-0.383	-0.1361	Yes
124	Tgfb1	17218	-0.390	-0.1303	Yes
125	Col4a2	18093	-0.474	-0.1627	Yes
126	Lama3	18099	-0.475	-0.1501	Yes
127	Dpysl3	18265	-0.499	-0.1452	Yes
128	Col12a1	18319	-0.509	-0.1342	Yes
129	Sgcb	18404	-0.522	-0.1245	Yes
130	Spock1	18589	-0.547	-0.1192	Yes
131	Igfbp4	18620	-0.552	-0.1059	Yes
132	Tpm2	18640	-0.556	-0.0919	Yes
133	Thy1	18664	-0.560	-0.0780	Yes
134	Spp1	18880	-0.606	-0.0728	Yes
135	Comp	19106	-0.674	-0.0662	Yes
136	Vcan	19210	-0.721	-0.0521	Yes
137	Emp3	19281	-0.757	-0.0353	Yes
138	Lgals1	19385	-0.840	-0.0180	Yes
139	Capg	19438	-0.910	0.0038	Yes