Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group1_versus_Group4.MPP_Pheno.cls#Group1_versus_Group4_repos
Phenotype	MPP_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.20114775
Normalized Enrichment Score (NES)	-0.9663772
Nominal p-value	0.5
FDR q-value	0.8166559
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ppp2cb	157	0.749	0.0127	No
2	Dusp6	375	0.629	0.0189	No
3	Dgkh	552	0.579	0.0259	No
4	Gmfb	584	0.570	0.0401	No
5	Spock2	781	0.527	0.0446	No
6	Plek	783	0.527	0.0591	No
7	Phex	913	0.504	0.0664	No
8	Dyrk2	1175	0.466	0.0659	No
9	Hspa1a	1381	0.440	0.0675	No
10	Src	1803	0.397	0.0568	No
11	Tnfaip3	1862	0.392	0.0646	No
12	Ehd1	2170	0.362	0.0588	No
13	Prep	2249	0.357	0.0647	No
14	Prss36	2348	0.349	0.0693	No
15	Itgam	2579	0.330	0.0666	No
16	F10	2826	0.314	0.0626	No
17	Usp8	2915	0.308	0.0666	No
18	L3mbtl4	2989	0.305	0.0713	No
19	Rhog	3176	0.294	0.0698	No
20	Cdk5r1	3286	0.287	0.0721	No
21	Rnf4	3311	0.285	0.0788	No
22	Fcer1g	3700	0.257	0.0659	No
23	Fyn	3714	0.256	0.0723	No
24	Rce1	3731	0.256	0.0786	No
25	Cda	3849	0.247	0.0794	No
26	Olr1	3908	0.244	0.0832	No
27	Gca	4055	0.236	0.0821	No
28	Ltf	4253	0.225	0.0782	No
29	C1qc	4351	0.219	0.0793	No
30	Gnai3	4371	0.218	0.0844	No
31	Cr2	4518	0.211	0.0827	No
32	Pdp1	4580	0.208	0.0853	No
33	Plaur	4597	0.207	0.0902	No
34	Rbsn	5093	0.183	0.0697	No
35	Scg3	5101	0.183	0.0744	No
36	Mmp14	5324	0.174	0.0677	No
37	Kynu	5374	0.171	0.0699	No
38	C3	5706	0.155	0.0571	No
39	Usp14	5870	0.147	0.0528	No
40	Hnf4a	5872	0.146	0.0568	No
41	Psen1	5890	0.146	0.0599	No
42	Prkcd	6001	0.141	0.0582	No
43	F5	6079	0.137	0.0580	No
44	Ctso	6208	0.131	0.0550	No
45	Prdm4	6269	0.127	0.0554	No
46	Grb2	6272	0.127	0.0588	No
47	Fn1	6287	0.126	0.0616	No
48	Lgmn	6498	0.116	0.0540	No
49	Gzmk	6552	0.115	0.0544	No
50	Cpm	6629	0.114	0.0537	No
51	Adam9	6660	0.112	0.0552	No
52	Maff	7027	0.098	0.0391	No
53	Pdgfb	7110	0.094	0.0374	No
54	Zfpm2	7233	0.090	0.0336	No
55	Jak2	7272	0.088	0.0341	No
56	Actn2	7286	0.087	0.0358	No
57	Pla2g4a	7315	0.086	0.0368	No
58	Cebpb	7459	0.080	0.0316	No
59	Ctsd	7814	0.063	0.0151	No
60	Xpnpep1	8112	0.052	0.0012	No
61	Lamp2	8258	0.046	-0.0050	No
62	Irf1	8292	0.044	-0.0055	No
63	Gp9	8353	0.042	-0.0075	No
64	Usp15	8435	0.039	-0.0106	No
65	Timp2	8464	0.037	-0.0110	No
66	Pim1	8486	0.036	-0.0111	No
67	Lta4h	8582	0.032	-0.0151	No
68	Kif2a	8742	0.026	-0.0226	No
69	Dgkg	8759	0.025	-0.0227	No
70	Lap3	8866	0.021	-0.0276	No
71	Raf1	9074	0.012	-0.0380	No
72	Gpd2	9228	0.006	-0.0457	No
73	Gng2	9524	-0.003	-0.0609	No
74	Vcpip1	9609	-0.006	-0.0651	No
75	Cblb	9641	-0.007	-0.0665	No
76	Hspa5	9685	-0.008	-0.0685	No
77	Ang	9817	-0.013	-0.0749	No
78	Zeb1	10072	-0.024	-0.0873	No
79	Akap10	10253	-0.031	-0.0957	No
80	Ctsc	10508	-0.041	-0.1077	No
81	Me1	10989	-0.060	-0.1309	No
82	Ctsl	11002	-0.060	-0.1298	No
83	Lrp1	11045	-0.062	-0.1303	No
84	Fdx1	11118	-0.065	-0.1322	No
85	Cd36	11241	-0.071	-0.1365	No
86	Calm3	11276	-0.072	-0.1363	No
87	Usp16	11341	-0.075	-0.1375	No
88	Pik3cg	11426	-0.078	-0.1397	No
89	Dpp4	11439	-0.079	-0.1381	No
90	Casp3	11621	-0.086	-0.1451	No
91	Sh2b3	11957	-0.101	-0.1596	No
92	C9	12016	-0.104	-0.1597	No
93	Dusp5	12082	-0.106	-0.1601	No
94	Gnai2	12349	-0.118	-0.1706	No
95	Pik3ca	12385	-0.121	-0.1691	No
96	S100a13	12451	-0.124	-0.1690	No
97	Lck	12511	-0.127	-0.1685	No
98	Rabif	12561	-0.130	-0.1674	No
99	Sirt6	12868	-0.141	-0.1793	No
100	Kcnip3	12912	-0.143	-0.1775	No
101	Cp	13017	-0.148	-0.1788	No
102	Dock10	13024	-0.148	-0.1750	No
103	Cd46	13097	-0.152	-0.1745	No
104	F8	13145	-0.155	-0.1726	No
105	Car2	13201	-0.157	-0.1711	No
106	Ppp4c	13624	-0.177	-0.1880	No
107	C1qa	13698	-0.180	-0.1868	No
108	Lipa	13840	-0.186	-0.1889	No
109	Irf2	14078	-0.197	-0.1957	Yes
110	Lcp2	14162	-0.201	-0.1944	Yes
111	Dock4	14263	-0.205	-0.1939	Yes
112	C2	14347	-0.209	-0.1923	Yes
113	Anxa5	14448	-0.215	-0.1916	Yes
114	Serpinc1	14554	-0.220	-0.1909	Yes
115	Brpf3	14573	-0.221	-0.1857	Yes
116	Stx4a	14683	-0.225	-0.1851	Yes
117	Gnb4	14855	-0.233	-0.1875	Yes
118	Gp1ba	15053	-0.244	-0.1908	Yes
119	Ccl5	15121	-0.248	-0.1874	Yes
120	Gata3	15129	-0.248	-0.1809	Yes
121	Casp9	15166	-0.250	-0.1758	Yes
122	Lgals3	15209	-0.253	-0.1710	Yes
123	Atox1	15358	-0.262	-0.1714	Yes
124	Irf7	15369	-0.262	-0.1646	Yes
125	Lyn	15388	-0.263	-0.1583	Yes
126	Tfpi2	15527	-0.272	-0.1578	Yes
127	Cfb	15563	-0.275	-0.1520	Yes
128	Dock9	15586	-0.276	-0.1455	Yes
129	Casp7	15812	-0.291	-0.1490	Yes
130	Was	15873	-0.294	-0.1440	Yes
131	Prcp	16202	-0.314	-0.1522	Yes
132	Cpq	16291	-0.320	-0.1479	Yes
133	Psmb9	16310	-0.321	-0.1399	Yes
134	Klkb1	16651	-0.343	-0.1480	Yes
135	Csrp1	16656	-0.344	-0.1386	Yes
136	S100a9	16761	-0.353	-0.1342	Yes
137	Clu	17231	-0.391	-0.1476	Yes
138	Plscr1	17369	-0.403	-0.1435	Yes
139	Ctss	17421	-0.407	-0.1349	Yes
140	Ctsh	17539	-0.416	-0.1294	Yes
141	Casp4	17759	-0.439	-0.1285	Yes
142	Pik3r5	17803	-0.443	-0.1185	Yes
143	Casp1	17815	-0.445	-0.1067	Yes
144	Kcnip2	17954	-0.459	-0.1011	Yes
145	Ctsb	17990	-0.464	-0.0901	Yes
146	Calm1	17996	-0.464	-0.0774	Yes
147	Col4a2	18093	-0.474	-0.0692	Yes
148	Mmp15	18136	-0.480	-0.0581	Yes
149	Pfn1	18220	-0.492	-0.0487	Yes
150	Cdh13	18237	-0.494	-0.0358	Yes
151	Gnb2	18459	-0.530	-0.0326	Yes
152	Pclo	18527	-0.539	-0.0211	Yes
153	Serpinb2	18550	-0.541	-0.0072	Yes
154	Gngt2	18687	-0.565	0.0014	Yes
155	Msrb1	19048	-0.655	0.0010	Yes
156	Notch4	19369	-0.825	0.0074	Yes