| Dataset | MPP.MPP_Pheno.cls#Group1_versus_Group3.MPP_Pheno.cls#Group1_versus_Group3_repos |
| Phenotype | MPP_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_SPERMATOGENESIS |
| Enrichment Score (ES) | -0.2780334 |
| Normalized Enrichment Score (NES) | -1.1490115 |
| Nominal p-value | 0.22606924 |
| FDR q-value | 0.9256045 |
| FWER p-Value | 0.982 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Nefh | 210 | 0.664 | 0.0166 | No |
| 2 | Hspa2 | 220 | 0.657 | 0.0433 | No |
| 3 | Lpin1 | 269 | 0.633 | 0.0670 | No |
| 4 | Mtor | 665 | 0.510 | 0.0677 | No |
| 5 | Ybx2 | 816 | 0.486 | 0.0800 | No |
| 6 | Tekt2 | 885 | 0.474 | 0.0961 | No |
| 7 | Tulp2 | 1052 | 0.447 | 0.1060 | No |
| 8 | Slc12a2 | 1137 | 0.435 | 0.1197 | No |
| 9 | Tnni3 | 1470 | 0.395 | 0.1189 | No |
| 10 | Nos1 | 1672 | 0.372 | 0.1239 | No |
| 11 | She | 2233 | 0.324 | 0.1085 | No |
| 12 | Topbp1 | 2677 | 0.297 | 0.0980 | No |
| 13 | Dmc1 | 2864 | 0.283 | 0.1001 | No |
| 14 | Zc3h14 | 2929 | 0.279 | 0.1084 | No |
| 15 | Clgn | 3048 | 0.271 | 0.1135 | No |
| 16 | Pgs1 | 3081 | 0.269 | 0.1230 | No |
| 17 | Mast2 | 3174 | 0.263 | 0.1291 | No |
| 18 | Adad1 | 3366 | 0.251 | 0.1297 | No |
| 19 | Crisp2 | 4119 | 0.213 | 0.0998 | No |
| 20 | Vdac3 | 4232 | 0.208 | 0.1026 | No |
| 21 | Csnk2a2 | 4266 | 0.206 | 0.1094 | No |
| 22 | Nf2 | 4376 | 0.200 | 0.1120 | No |
| 23 | Stam2 | 4401 | 0.199 | 0.1190 | No |
| 24 | Rfc4 | 4513 | 0.195 | 0.1214 | No |
| 25 | Gapdhs | 4556 | 0.192 | 0.1272 | No |
| 26 | Agfg1 | 4604 | 0.190 | 0.1326 | No |
| 27 | Pcsk4 | 4641 | 0.188 | 0.1385 | No |
| 28 | Ide | 5703 | 0.141 | 0.0897 | No |
| 29 | Gstm5 | 5950 | 0.129 | 0.0823 | No |
| 30 | Scg5 | 6324 | 0.115 | 0.0679 | No |
| 31 | Ezh2 | 6388 | 0.114 | 0.0693 | No |
| 32 | Adam2 | 6783 | 0.098 | 0.0531 | No |
| 33 | Pias2 | 7335 | 0.076 | 0.0278 | No |
| 34 | Strbp | 7471 | 0.070 | 0.0238 | No |
| 35 | Zpbp | 7482 | 0.069 | 0.0261 | No |
| 36 | Gpr182 | 7610 | 0.064 | 0.0222 | No |
| 37 | Jam3 | 7894 | 0.053 | 0.0098 | No |
| 38 | Slc2a5 | 7933 | 0.051 | 0.0100 | No |
| 39 | Sirt1 | 7985 | 0.050 | 0.0094 | No |
| 40 | Art3 | 8283 | 0.039 | -0.0043 | No |
| 41 | Map7 | 8309 | 0.038 | -0.0040 | No |
| 42 | Camk4 | 8420 | 0.033 | -0.0083 | No |
| 43 | Zc2hc1c | 8465 | 0.031 | -0.0093 | No |
| 44 | Hspa4l | 8509 | 0.029 | -0.0103 | No |
| 45 | Braf | 8956 | 0.014 | -0.0327 | No |
| 46 | Mlf1 | 9127 | 0.007 | -0.0412 | No |
| 47 | Mllt10 | 9138 | 0.007 | -0.0414 | No |
| 48 | Rad17 | 9200 | 0.005 | -0.0443 | No |
| 49 | Prkar2a | 9742 | -0.015 | -0.0716 | No |
| 50 | Ttk | 9786 | -0.016 | -0.0731 | No |
| 51 | Acrbp | 9814 | -0.018 | -0.0737 | No |
| 52 | Gmcl1 | 10051 | -0.026 | -0.0848 | No |
| 53 | Ddx4 | 10187 | -0.032 | -0.0905 | No |
| 54 | Tle4 | 10251 | -0.034 | -0.0923 | No |
| 55 | Clvs1 | 10294 | -0.036 | -0.0930 | No |
| 56 | Pomc | 10946 | -0.062 | -0.1240 | No |
| 57 | Clpb | 11198 | -0.072 | -0.1339 | No |
| 58 | Ncaph | 11558 | -0.085 | -0.1489 | No |
| 59 | Pebp1 | 11649 | -0.088 | -0.1499 | No |
| 60 | Phf7 | 11722 | -0.091 | -0.1498 | No |
| 61 | Ip6k1 | 11930 | -0.099 | -0.1564 | No |
| 62 | Chfr | 11982 | -0.101 | -0.1549 | No |
| 63 | Ddx25 | 12192 | -0.109 | -0.1611 | No |
| 64 | Tcp11 | 12373 | -0.117 | -0.1656 | No |
| 65 | Arl4a | 12614 | -0.127 | -0.1727 | No |
| 66 | Il12rb2 | 12626 | -0.128 | -0.1680 | No |
| 67 | Tsn | 12735 | -0.133 | -0.1681 | No |
| 68 | Dcc | 13262 | -0.155 | -0.1887 | No |
| 69 | Grm8 | 13451 | -0.164 | -0.1917 | No |
| 70 | Nphp1 | 14089 | -0.195 | -0.2164 | No |
| 71 | Ift88 | 14787 | -0.227 | -0.2429 | No |
| 72 | Gfi1 | 15230 | -0.253 | -0.2552 | No |
| 73 | Nek2 | 15310 | -0.258 | -0.2486 | No |
| 74 | Coil | 15882 | -0.288 | -0.2661 | Yes |
| 75 | Scg3 | 16011 | -0.296 | -0.2605 | Yes |
| 76 | Cnih2 | 16096 | -0.301 | -0.2524 | Yes |
| 77 | Pacrg | 16363 | -0.320 | -0.2529 | Yes |
| 78 | Phkg2 | 16418 | -0.325 | -0.2422 | Yes |
| 79 | Bub1 | 16799 | -0.351 | -0.2473 | Yes |
| 80 | Aurka | 17331 | -0.388 | -0.2586 | Yes |
| 81 | Taldo1 | 17529 | -0.408 | -0.2519 | Yes |
| 82 | Gsg1 | 17643 | -0.419 | -0.2404 | Yes |
| 83 | Parp2 | 17870 | -0.445 | -0.2337 | Yes |
| 84 | Cdk1 | 17907 | -0.449 | -0.2170 | Yes |
| 85 | Spata6 | 18035 | -0.461 | -0.2045 | Yes |
| 86 | Septin4 | 18267 | -0.493 | -0.1960 | Yes |
| 87 | Psmg1 | 18956 | -0.626 | -0.2056 | Yes |
| 88 | Dbf4 | 18992 | -0.638 | -0.1810 | Yes |
| 89 | Cct6b | 19060 | -0.661 | -0.1572 | Yes |
| 90 | Cftr | 19089 | -0.671 | -0.1309 | Yes |
| 91 | Kif2c | 19242 | -0.742 | -0.1081 | Yes |
| 92 | Oaz3 | 19247 | -0.746 | -0.0775 | Yes |
| 93 | Ccnb2 | 19348 | -0.820 | -0.0487 | Yes |
| 94 | Cdkn3 | 19509 | -1.383 | 0.0002 | Yes |

