Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group1_versus_Group3.MPP_Pheno.cls#Group1_versus_Group3_repos
Phenotype	MPP_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	-0.26921347
Normalized Enrichment Score (NES)	-1.0787101
Nominal p-value	0.3056093
FDR q-value	0.8616783
FWER p-Value	0.993

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Aebp1	95	0.761	0.0171	No
2	Pkia	120	0.727	0.0369	No
3	Lpin1	269	0.633	0.0475	No
4	Eif4a2	522	0.547	0.0503	No
5	Atp2a1	587	0.527	0.0623	No
6	Sptan1	743	0.494	0.0686	No
7	Gabarapl2	755	0.492	0.0822	No
8	Hspb8	1290	0.415	0.0666	No
9	Bhlhe40	1406	0.401	0.0723	No
10	Sorbs1	1471	0.395	0.0804	No
11	Fgf2	1662	0.373	0.0814	No
12	Nos1	1672	0.372	0.0917	No
13	Fdps	1775	0.363	0.0969	No
14	Sh3bgr	1804	0.361	0.1059	No
15	Pfkm	1849	0.358	0.1140	No
16	Sparc	1878	0.356	0.1228	No
17	Akt2	2334	0.317	0.1085	No
18	Sspn	2549	0.305	0.1063	No
19	Dmpk	2884	0.282	0.0972	No
20	Adcy9	3083	0.269	0.0948	No
21	Hbegf	3105	0.268	0.1015	No
22	Myh9	3187	0.262	0.1049	No
23	Schip1	3245	0.259	0.1094	No
24	Ifrd1	3453	0.247	0.1059	No
25	Lsp1	3536	0.243	0.1087	No
26	Tnnt1	3640	0.237	0.1102	No
27	Cfd	3661	0.236	0.1160	No
28	Eno3	3681	0.235	0.1218	No
29	Acsl1	4076	0.216	0.1077	No
30	Hdac5	4093	0.215	0.1131	No
31	Mef2d	4320	0.203	0.1073	No
32	Itgb1	4358	0.201	0.1112	No
33	Pde4dip	4422	0.198	0.1137	No
34	Adam12	5001	0.171	0.0888	No
35	Gpx3	5129	0.166	0.0871	No
36	Flii	5147	0.166	0.0910	No
37	Ryr1	5477	0.152	0.0784	No
38	Prnp	5525	0.150	0.0803	No
39	Atp6ap1	5559	0.148	0.0829	No
40	Col4a2	6006	0.126	0.0635	No
41	Fhl1	6189	0.119	0.0576	No
42	Mras	6193	0.119	0.0609	No
43	Efs	6335	0.115	0.0569	No
44	Tnnt3	6702	0.102	0.0410	No
45	Gadd45b	7066	0.086	0.0247	No
46	Bin1	7116	0.084	0.0246	No
47	Mef2a	7196	0.081	0.0229	No
48	Myo1c	7217	0.081	0.0242	No
49	Rb1	7269	0.078	0.0238	No
50	Notch1	7334	0.076	0.0227	No
51	Mybpc3	7458	0.070	0.0184	No
52	Bag1	7584	0.065	0.0138	No
53	Chrnb1	7679	0.062	0.0107	No
54	Ncam1	7687	0.061	0.0121	No
55	Dapk2	7709	0.060	0.0128	No
56	Col1a1	7932	0.051	0.0028	No
57	Tagln	8644	0.025	-0.0331	No
58	Svil	8825	0.018	-0.0419	No
59	Myl4	8892	0.016	-0.0449	No
60	Slc6a8	8906	0.015	-0.0451	No
61	Tsc2	8944	0.014	-0.0466	No
62	Ak1	9120	0.008	-0.0554	No
63	Rit1	9518	-0.006	-0.0757	No
64	Nav2	9586	-0.008	-0.0789	No
65	Sgcd	9777	-0.016	-0.0883	No
66	Gaa	9778	-0.016	-0.0878	No
67	Syngr2	9797	-0.017	-0.0883	No
68	Myl6b	9931	-0.022	-0.0945	No
69	Cd36	10107	-0.028	-0.1027	No
70	Actn2	10175	-0.031	-0.1053	No
71	Sorbs3	10306	-0.036	-0.1109	No
72	Cox7a1	10544	-0.046	-0.1219	No
73	Vipr1	10787	-0.055	-0.1328	No
74	Agrn	10802	-0.055	-0.1319	No
75	Ctf1	10803	-0.055	-0.1303	No
76	Large1	10808	-0.055	-0.1289	No
77	Cdh13	11057	-0.067	-0.1398	No
78	Tpm3	11224	-0.073	-0.1462	No
79	App	11456	-0.080	-0.1559	No
80	Pdlim7	11531	-0.083	-0.1573	No
81	Mylk	11535	-0.084	-0.1550	No
82	Foxo4	12052	-0.103	-0.1786	No
83	Csrp3	12292	-0.114	-0.1877	No
84	Mylpf	12325	-0.115	-0.1860	No
85	Sirt2	12392	-0.118	-0.1860	No
86	Mapre3	12399	-0.118	-0.1829	No
87	Ptp4a3	12850	-0.138	-0.2021	No
88	Mapk12	12896	-0.140	-0.2004	No
89	Kcnh2	13004	-0.145	-0.2017	No
90	Pcx	13065	-0.147	-0.2006	No
91	Ldb3	13101	-0.148	-0.1981	No
92	Myom1	13572	-0.170	-0.2175	No
93	Cdkn1a	13574	-0.170	-0.2126	No
94	Itgb5	13616	-0.172	-0.2097	No
95	Gnao1	13741	-0.178	-0.2110	No
96	Mef2c	13989	-0.190	-0.2182	No
97	Gsn	14349	-0.207	-0.2308	No
98	Actn3	14403	-0.210	-0.2274	No
99	Cryab	14507	-0.214	-0.2266	No
100	Sh2b1	14824	-0.229	-0.2362	No
101	Erbb3	14845	-0.231	-0.2306	No
102	Speg	14929	-0.235	-0.2281	No
103	Dtna	15215	-0.252	-0.2355	No
104	Pygm	15558	-0.271	-0.2453	No
105	Crat	15583	-0.272	-0.2387	No
106	Itgb4	16175	-0.307	-0.2603	Yes
107	Agl	16283	-0.314	-0.2568	Yes
108	Plxnb2	16292	-0.315	-0.2481	Yes
109	Dmd	16314	-0.316	-0.2400	Yes
110	Nqo1	16373	-0.320	-0.2338	Yes
111	Pick1	16375	-0.321	-0.2245	Yes
112	Ache	16405	-0.324	-0.2167	Yes
113	Wwtr1	16541	-0.332	-0.2141	Yes
114	Tpm2	16544	-0.332	-0.2046	Yes
115	Psen2	16716	-0.346	-0.2034	Yes
116	Igfbp7	16745	-0.348	-0.1948	Yes
117	Tnni2	16865	-0.355	-0.1907	Yes
118	Cnn3	16885	-0.356	-0.1814	Yes
119	Tnnc1	16942	-0.360	-0.1738	Yes
120	Tpd52l1	16986	-0.364	-0.1655	Yes
121	Sphk1	17006	-0.365	-0.1560	Yes
122	Ocel1	17116	-0.373	-0.1508	Yes
123	Fkbp1b	17211	-0.379	-0.1447	Yes
124	Myh11	17265	-0.384	-0.1364	Yes
125	Igf1	17269	-0.384	-0.1254	Yes
126	Kifc3	17305	-0.386	-0.1160	Yes
127	Clu	17642	-0.419	-0.1213	Yes
128	Tgfb1	17706	-0.427	-0.1122	Yes
129	Camk2b	17835	-0.441	-0.1060	Yes
130	Reep1	18298	-0.497	-0.1155	Yes
131	Ablim1	18321	-0.500	-0.1022	Yes
132	Ppfia4	18545	-0.537	-0.0982	Yes
133	Gja5	18633	-0.552	-0.0867	Yes
134	Kcnh1	18673	-0.558	-0.0726	Yes
135	Ckb	18892	-0.606	-0.0664	Yes
136	Klf5	19160	-0.693	-0.0601	Yes
137	Lama2	19224	-0.734	-0.0421	Yes
138	Smtn	19413	-0.897	-0.0259	Yes
139	Stc2	19484	-1.071	0.0014	Yes