| Dataset | MPP.MPP_Pheno.cls#Group1_versus_Group3.MPP_Pheno.cls#Group1_versus_Group3_repos |
| Phenotype | MPP_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_INFLAMMATORY_RESPONSE |
| Enrichment Score (ES) | -0.3248619 |
| Normalized Enrichment Score (NES) | -1.2632743 |
| Nominal p-value | 0.19444445 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.909 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Lif | 83 | 0.771 | 0.0156 | No |
| 2 | Best1 | 122 | 0.726 | 0.0324 | No |
| 3 | Lpar1 | 555 | 0.539 | 0.0240 | No |
| 4 | Ccrl2 | 561 | 0.537 | 0.0376 | No |
| 5 | Stab1 | 921 | 0.469 | 0.0312 | No |
| 6 | Itgb3 | 1181 | 0.430 | 0.0289 | No |
| 7 | Irak2 | 1382 | 0.405 | 0.0290 | No |
| 8 | Acvr2a | 1495 | 0.392 | 0.0333 | No |
| 9 | Nod2 | 1540 | 0.386 | 0.0410 | No |
| 10 | Scarf1 | 1844 | 0.358 | 0.0346 | No |
| 11 | Ahr | 1897 | 0.355 | 0.0411 | No |
| 12 | Tacr1 | 1954 | 0.348 | 0.0472 | No |
| 13 | Tlr2 | 2035 | 0.341 | 0.0519 | No |
| 14 | Lck | 2180 | 0.328 | 0.0529 | No |
| 15 | Pdpn | 2200 | 0.326 | 0.0604 | No |
| 16 | Dcbld2 | 2413 | 0.313 | 0.0575 | No |
| 17 | Hbegf | 3105 | 0.268 | 0.0287 | No |
| 18 | Lcp2 | 3375 | 0.251 | 0.0213 | No |
| 19 | Pcdh7 | 3491 | 0.245 | 0.0217 | No |
| 20 | Atp2c1 | 3779 | 0.231 | 0.0129 | No |
| 21 | Slc7a2 | 3787 | 0.230 | 0.0184 | No |
| 22 | Mefv | 3822 | 0.229 | 0.0226 | No |
| 23 | Nlrp3 | 3884 | 0.226 | 0.0253 | No |
| 24 | Tnfsf9 | 3925 | 0.224 | 0.0290 | No |
| 25 | Met | 4090 | 0.215 | 0.0261 | No |
| 26 | Mmp14 | 4247 | 0.207 | 0.0233 | No |
| 27 | Atp2b1 | 4404 | 0.199 | 0.0204 | No |
| 28 | Raf1 | 4766 | 0.182 | 0.0065 | No |
| 29 | Hif1a | 4788 | 0.181 | 0.0101 | No |
| 30 | Slc7a1 | 5315 | 0.160 | -0.0130 | No |
| 31 | Cxcl10 | 5568 | 0.148 | -0.0222 | No |
| 32 | Gnai3 | 5582 | 0.147 | -0.0190 | No |
| 33 | Tlr1 | 5704 | 0.141 | -0.0217 | No |
| 34 | Cx3cl1 | 5714 | 0.140 | -0.0185 | No |
| 35 | Aqp9 | 5927 | 0.130 | -0.0261 | No |
| 36 | Tnfsf10 | 6433 | 0.113 | -0.0493 | No |
| 37 | Slc11a2 | 6448 | 0.112 | -0.0471 | No |
| 38 | Il7r | 6478 | 0.111 | -0.0457 | No |
| 39 | Eif2ak2 | 6681 | 0.103 | -0.0535 | No |
| 40 | Kcnj2 | 6730 | 0.100 | -0.0534 | No |
| 41 | Adrm1 | 6734 | 0.100 | -0.0510 | No |
| 42 | Kif1b | 7063 | 0.086 | -0.0657 | No |
| 43 | Kcnmb2 | 7073 | 0.086 | -0.0639 | No |
| 44 | Chst2 | 7141 | 0.083 | -0.0653 | No |
| 45 | Rgs1 | 7203 | 0.081 | -0.0663 | No |
| 46 | Sgms2 | 7313 | 0.076 | -0.0700 | No |
| 47 | Abca1 | 7412 | 0.072 | -0.0732 | No |
| 48 | Gpc3 | 7443 | 0.071 | -0.0729 | No |
| 49 | Sema4d | 7512 | 0.068 | -0.0746 | No |
| 50 | Il4ra | 7550 | 0.067 | -0.0748 | No |
| 51 | Vip | 7606 | 0.064 | -0.0760 | No |
| 52 | Abi1 | 8046 | 0.048 | -0.0975 | No |
| 53 | Psen1 | 8058 | 0.047 | -0.0968 | No |
| 54 | Plaur | 8109 | 0.046 | -0.0982 | No |
| 55 | Acvr1b | 8139 | 0.045 | -0.0986 | No |
| 56 | Ccr7 | 8278 | 0.039 | -0.1047 | No |
| 57 | Csf3r | 8341 | 0.036 | -0.1070 | No |
| 58 | Gpr183 | 8749 | 0.021 | -0.1274 | No |
| 59 | Btg2 | 8818 | 0.019 | -0.1305 | No |
| 60 | Slc31a1 | 8913 | 0.015 | -0.1349 | No |
| 61 | Myc | 9017 | 0.011 | -0.1400 | No |
| 62 | Atp2a2 | 9177 | 0.006 | -0.1480 | No |
| 63 | Nampt | 9513 | -0.006 | -0.1652 | No |
| 64 | Il15ra | 9636 | -0.010 | -0.1712 | No |
| 65 | Ptafr | 9753 | -0.015 | -0.1768 | No |
| 66 | Tnfrsf9 | 9929 | -0.022 | -0.1853 | No |
| 67 | Sele | 10045 | -0.026 | -0.1906 | No |
| 68 | Il1r1 | 10302 | -0.036 | -0.2029 | No |
| 69 | Irf1 | 10778 | -0.054 | -0.2260 | No |
| 70 | Ifnar1 | 10890 | -0.059 | -0.2302 | No |
| 71 | Ptpre | 11200 | -0.072 | -0.2443 | No |
| 72 | Scn1b | 11383 | -0.078 | -0.2517 | No |
| 73 | Cd82 | 11553 | -0.085 | -0.2582 | No |
| 74 | Rnf144b | 11562 | -0.085 | -0.2565 | No |
| 75 | Tnfrsf1b | 11602 | -0.086 | -0.2563 | No |
| 76 | Pde4b | 11629 | -0.087 | -0.2553 | No |
| 77 | Irf7 | 11744 | -0.091 | -0.2589 | No |
| 78 | Pik3r5 | 11764 | -0.092 | -0.2575 | No |
| 79 | Ldlr | 11826 | -0.094 | -0.2582 | No |
| 80 | Ripk2 | 11944 | -0.099 | -0.2617 | No |
| 81 | Il18 | 11968 | -0.100 | -0.2603 | No |
| 82 | Sell | 12008 | -0.101 | -0.2597 | No |
| 83 | Hrh1 | 12088 | -0.105 | -0.2610 | No |
| 84 | Nmi | 12243 | -0.111 | -0.2661 | No |
| 85 | Cxcr6 | 12332 | -0.115 | -0.2677 | No |
| 86 | Ifitm1 | 12359 | -0.116 | -0.2660 | No |
| 87 | Ccl5 | 12451 | -0.121 | -0.2676 | No |
| 88 | Tlr3 | 12526 | -0.123 | -0.2682 | No |
| 89 | Icam1 | 12588 | -0.125 | -0.2682 | No |
| 90 | Gabbr1 | 12792 | -0.135 | -0.2752 | No |
| 91 | Csf1 | 12827 | -0.137 | -0.2734 | No |
| 92 | Lyn | 12877 | -0.139 | -0.2723 | No |
| 93 | Osmr | 13103 | -0.148 | -0.2801 | No |
| 94 | Itga5 | 13169 | -0.151 | -0.2796 | No |
| 95 | Nmur1 | 13187 | -0.151 | -0.2765 | No |
| 96 | Sri | 13314 | -0.157 | -0.2790 | No |
| 97 | Gpr132 | 13433 | -0.163 | -0.2809 | No |
| 98 | Cdkn1a | 13574 | -0.170 | -0.2837 | No |
| 99 | Hpn | 13756 | -0.179 | -0.2884 | No |
| 100 | Tapbp | 13798 | -0.181 | -0.2859 | No |
| 101 | Selenos | 13932 | -0.187 | -0.2879 | No |
| 102 | Rela | 13978 | -0.189 | -0.2854 | No |
| 103 | Ebi3 | 14082 | -0.194 | -0.2857 | No |
| 104 | Calcrl | 14284 | -0.204 | -0.2908 | No |
| 105 | Il15 | 14317 | -0.206 | -0.2871 | No |
| 106 | Ptger2 | 14480 | -0.212 | -0.2900 | No |
| 107 | Ptgir | 14582 | -0.218 | -0.2896 | No |
| 108 | Cybb | 14617 | -0.219 | -0.2857 | No |
| 109 | Npffr2 | 14723 | -0.224 | -0.2853 | No |
| 110 | Nfkbia | 14970 | -0.238 | -0.2919 | No |
| 111 | Nfkb1 | 15112 | -0.246 | -0.2928 | No |
| 112 | Ffar2 | 15124 | -0.247 | -0.2870 | No |
| 113 | Adgre1 | 15128 | -0.247 | -0.2808 | No |
| 114 | Kcna3 | 15432 | -0.263 | -0.2896 | No |
| 115 | Cmklr1 | 15475 | -0.267 | -0.2849 | No |
| 116 | P2ry2 | 16249 | -0.312 | -0.3168 | Yes |
| 117 | Ptger4 | 16268 | -0.314 | -0.3096 | Yes |
| 118 | Bst2 | 16368 | -0.320 | -0.3065 | Yes |
| 119 | Il18rap | 16429 | -0.325 | -0.3012 | Yes |
| 120 | Osm | 16471 | -0.326 | -0.2949 | Yes |
| 121 | Pvr | 16604 | -0.337 | -0.2930 | Yes |
| 122 | Il18r1 | 16728 | -0.347 | -0.2904 | Yes |
| 123 | Clec5a | 16830 | -0.352 | -0.2865 | Yes |
| 124 | Ifngr2 | 16880 | -0.355 | -0.2799 | Yes |
| 125 | Sphk1 | 17006 | -0.365 | -0.2769 | Yes |
| 126 | Tacr3 | 17124 | -0.373 | -0.2733 | Yes |
| 127 | Gna15 | 17187 | -0.378 | -0.2668 | Yes |
| 128 | Il10 | 17213 | -0.379 | -0.2583 | Yes |
| 129 | Ly6e | 17494 | -0.405 | -0.2623 | Yes |
| 130 | Axl | 17614 | -0.416 | -0.2577 | Yes |
| 131 | Fzd5 | 17645 | -0.419 | -0.2484 | Yes |
| 132 | Gch1 | 17675 | -0.422 | -0.2390 | Yes |
| 133 | Mxd1 | 17817 | -0.439 | -0.2349 | Yes |
| 134 | Klf6 | 17936 | -0.451 | -0.2294 | Yes |
| 135 | Slc4a4 | 17970 | -0.454 | -0.2194 | Yes |
| 136 | Cd40 | 17996 | -0.458 | -0.2088 | Yes |
| 137 | Slc28a2 | 18005 | -0.458 | -0.1974 | Yes |
| 138 | Rhog | 18311 | -0.498 | -0.2003 | Yes |
| 139 | Cd69 | 18357 | -0.506 | -0.1896 | Yes |
| 140 | Olr1 | 18360 | -0.506 | -0.1766 | Yes |
| 141 | P2rx7 | 18361 | -0.507 | -0.1635 | Yes |
| 142 | Il10ra | 18362 | -0.507 | -0.1505 | Yes |
| 143 | Tpbg | 18393 | -0.511 | -0.1388 | Yes |
| 144 | Slamf1 | 18554 | -0.538 | -0.1332 | Yes |
| 145 | P2rx4 | 18749 | -0.573 | -0.1284 | Yes |
| 146 | Rtp4 | 19117 | -0.681 | -0.1298 | Yes |
| 147 | Icam4 | 19151 | -0.690 | -0.1136 | Yes |
| 148 | Adora2b | 19161 | -0.693 | -0.0962 | Yes |
| 149 | Cd48 | 19260 | -0.752 | -0.0818 | Yes |
| 150 | Icosl | 19300 | -0.777 | -0.0638 | Yes |
| 151 | Gp1ba | 19345 | -0.817 | -0.0450 | Yes |
| 152 | Slc31a2 | 19467 | -1.000 | -0.0254 | Yes |
| 153 | Emp3 | 19485 | -1.072 | 0.0014 | Yes |

