Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group1_versus_Group3.MPP_Pheno.cls#Group1_versus_Group3_repos
Phenotype	MPP_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.27341914
Normalized Enrichment Score (NES)	-1.2385986
Nominal p-value	0.12698413
FDR q-value	1.0
FWER p-Value	0.938

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	C1qc	174	0.685	0.0090	No
2	Ehd1	396	0.585	0.0129	No
3	Itgam	624	0.520	0.0148	No
4	Prdm4	758	0.491	0.0208	No
5	Phex	924	0.469	0.0245	No
6	Ppp2cb	1256	0.420	0.0185	No
7	Klkb1	1351	0.408	0.0243	No
8	C3	1360	0.407	0.0345	No
9	Ang	1375	0.405	0.0445	No
10	Pim1	1376	0.405	0.0551	No
11	Rbsn	1404	0.401	0.0642	No
12	Timp2	1410	0.400	0.0744	No
13	Plek	1829	0.359	0.0623	No
14	Cebpb	2019	0.342	0.0614	No
15	Lck	2180	0.328	0.0618	No
16	Jak2	2439	0.312	0.0566	No
17	L3mbtl4	2551	0.305	0.0589	No
18	Cdk5r1	2606	0.302	0.0640	No
19	Ltf	2646	0.299	0.0698	No
20	Cr2	2802	0.288	0.0694	No
21	Dgkh	2803	0.288	0.0770	No
22	Gmfb	3063	0.271	0.0707	No
23	Hspa1a	3234	0.260	0.0687	No
24	Hnf4a	3259	0.258	0.0742	No
25	Dpp4	3307	0.254	0.0784	No
26	Lcp2	3375	0.251	0.0816	No
27	Cpm	3785	0.230	0.0665	No
28	Spock2	3792	0.230	0.0722	No
29	Kynu	3809	0.229	0.0774	No
30	Prep	3981	0.221	0.0743	No
31	Pla2g4a	4056	0.217	0.0762	No
32	Sirt6	4142	0.212	0.0774	No
33	Mmp14	4247	0.207	0.0774	No
34	Grb2	4390	0.200	0.0753	No
35	Usp16	4393	0.200	0.0804	No
36	Rnf4	4488	0.196	0.0807	No
37	Adam9	4530	0.194	0.0837	No
38	C2	4564	0.192	0.0870	No
39	Raf1	4766	0.182	0.0814	No
40	Dock9	4824	0.179	0.0832	No
41	Rabif	5426	0.155	0.0562	No
42	Gnai3	5582	0.147	0.0520	No
43	Cp	5746	0.139	0.0472	No
44	Zfpm2	5949	0.129	0.0402	No
45	Col4a2	6006	0.126	0.0406	No
46	Vcpip1	6045	0.125	0.0419	No
47	Kif2a	6082	0.124	0.0433	No
48	Lamp2	6271	0.117	0.0366	No
49	Zeb1	6293	0.116	0.0386	No
50	Xpnpep1	6769	0.099	0.0166	No
51	Usp8	7083	0.085	0.0027	No
52	Dgkg	7179	0.082	-0.0001	No
53	Ctsl	7342	0.075	-0.0065	No
54	Prss36	7561	0.066	-0.0160	No
55	Dusp5	7598	0.064	-0.0162	No
56	Gp9	7625	0.064	-0.0159	No
57	Me1	7803	0.056	-0.0235	No
58	Cblb	7810	0.056	-0.0224	No
59	Ctso	7885	0.053	-0.0248	No
60	Cda	7988	0.050	-0.0288	No
61	Serpinc1	8036	0.048	-0.0299	No
62	Psen1	8058	0.047	-0.0298	No
63	Gca	8092	0.046	-0.0303	No
64	Plaur	8109	0.046	-0.0299	No
65	Brpf3	8546	0.028	-0.0517	No
66	Rce1	8559	0.027	-0.0516	No
67	Usp15	8733	0.022	-0.0600	No
68	Kcnip3	8863	0.017	-0.0662	No
69	Usp14	8871	0.017	-0.0661	No
70	Maff	8921	0.015	-0.0683	No
71	Cpq	9148	0.007	-0.0798	No
72	Lgals3	9557	-0.008	-0.1006	No
73	Lap3	9675	-0.012	-0.1064	No
74	Casp4	9885	-0.021	-0.1166	No
75	Lta4h	9909	-0.021	-0.1173	No
76	Pik3ca	10043	-0.026	-0.1234	No
77	Cd36	10107	-0.028	-0.1260	No
78	Actn2	10175	-0.031	-0.1286	No
79	Gnai2	10199	-0.032	-0.1290	No
80	Gpd2	10221	-0.033	-0.1292	No
81	Irf1	10778	-0.054	-0.1565	No
82	Pik3cg	10870	-0.058	-0.1596	No
83	Cdh13	11057	-0.067	-0.1675	No
84	Src	11233	-0.074	-0.1746	No
85	Pdp1	11243	-0.074	-0.1731	No
86	Gng2	11292	-0.076	-0.1736	No
87	Serpinb2	11295	-0.076	-0.1717	No
88	Dyrk2	11367	-0.077	-0.1734	No
89	F5	11411	-0.079	-0.1736	No
90	Msrb1	11425	-0.079	-0.1722	No
91	Akap10	11582	-0.086	-0.1780	No
92	Tfpi2	11608	-0.087	-0.1770	No
93	Fdx1	11632	-0.088	-0.1759	No
94	Hspa5	11726	-0.091	-0.1783	No
95	Irf7	11744	-0.091	-0.1768	No
96	Pik3r5	11764	-0.092	-0.1754	No
97	Pdgfb	11903	-0.098	-0.1799	No
98	Dock10	11992	-0.101	-0.1818	No
99	Ctss	12206	-0.110	-0.1900	No
100	Prkcd	12225	-0.110	-0.1880	No
101	Cfb	12323	-0.115	-0.1900	No
102	Casp7	12346	-0.116	-0.1881	No
103	Ccl5	12451	-0.121	-0.1903	No
104	F8	12563	-0.124	-0.1928	No
105	Ctsh	12847	-0.138	-0.2038	No
106	Lyn	12877	-0.139	-0.2016	No
107	Cd46	12948	-0.142	-0.2015	No
108	Lrp1	13327	-0.158	-0.2169	No
109	Casp3	13473	-0.165	-0.2201	No
110	Dusp6	13971	-0.189	-0.2408	No
111	F10	14154	-0.198	-0.2450	No
112	Gzmk	14410	-0.210	-0.2527	No
113	Prcp	14695	-0.223	-0.2615	No
114	Ctsd	14754	-0.225	-0.2586	No
115	Was	15007	-0.240	-0.2653	No
116	Calm1	15165	-0.250	-0.2669	Yes
117	Plscr1	15258	-0.256	-0.2649	Yes
118	Calm3	15326	-0.258	-0.2616	Yes
119	Fcer1g	15443	-0.264	-0.2607	Yes
120	Sh2b3	15483	-0.267	-0.2557	Yes
121	Gnb4	15563	-0.271	-0.2527	Yes
122	Gnb2	15597	-0.273	-0.2473	Yes
123	Fyn	15783	-0.282	-0.2494	Yes
124	C9	15819	-0.284	-0.2438	Yes
125	Casp1	15896	-0.289	-0.2401	Yes
126	Lgmn	16010	-0.296	-0.2382	Yes
127	Scg3	16011	-0.296	-0.2305	Yes
128	Ppp4c	16152	-0.305	-0.2297	Yes
129	Dock4	16250	-0.312	-0.2265	Yes
130	Stx4a	16296	-0.315	-0.2206	Yes
131	Pfn1	16556	-0.333	-0.2252	Yes
132	Anxa5	16561	-0.333	-0.2167	Yes
133	S100a9	16869	-0.355	-0.2233	Yes
134	Ctsc	16893	-0.356	-0.2151	Yes
135	Notch4	16958	-0.362	-0.2089	Yes
136	Irf2	17222	-0.380	-0.2126	Yes
137	S100a13	17344	-0.389	-0.2086	Yes
138	Casp9	17434	-0.398	-0.2028	Yes
139	Tnfaip3	17582	-0.413	-0.1995	Yes
140	C1qa	17599	-0.415	-0.1895	Yes
141	Clu	17642	-0.419	-0.1807	Yes
142	Ctsb	17758	-0.432	-0.1753	Yes
143	Atox1	18260	-0.491	-0.1883	Yes
144	Rhog	18311	-0.498	-0.1778	Yes
145	Car2	18349	-0.505	-0.1665	Yes
146	Olr1	18360	-0.506	-0.1538	Yes
147	Lipa	18648	-0.554	-0.1541	Yes
148	Csrp1	18944	-0.621	-0.1530	Yes
149	Psmb9	19141	-0.688	-0.1451	Yes
150	Pclo	19185	-0.711	-0.1287	Yes
151	Fn1	19332	-0.803	-0.1152	Yes
152	Gp1ba	19345	-0.817	-0.0944	Yes
153	Gngt2	19366	-0.837	-0.0735	Yes
154	Kcnip2	19425	-0.911	-0.0526	Yes
155	Gata3	19433	-0.931	-0.0286	Yes
156	Mmp15	19499	-1.243	0.0007	Yes