Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group1_versus_Group2.MPP_Pheno.cls#Group1_versus_Group2_repos
Phenotype	MPP_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	-0.2545698
Normalized Enrichment Score (NES)	-1.0113914
Nominal p-value	0.43137255
FDR q-value	0.83373374
FWER p-Value	0.995

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Plek	144	0.750	0.0110	No
2	Ccrl2	322	0.635	0.0175	No
3	Klf4	367	0.611	0.0302	No
4	Fosl2	589	0.547	0.0322	No
5	Ehd1	804	0.507	0.0336	No
6	Egr1	813	0.504	0.0456	No
7	Ccnd1	1025	0.474	0.0464	No
8	Ier2	1046	0.470	0.0569	No
9	Dusp5	1322	0.431	0.0533	No
10	Vegfa	1352	0.426	0.0622	No
11	Tubb2a	1391	0.422	0.0707	No
12	Btg1	1505	0.410	0.0749	No
13	Tnfsf9	1513	0.409	0.0846	No
14	Map2k3	1666	0.393	0.0864	No
15	Gadd45b	1714	0.388	0.0935	No
16	Dusp4	1767	0.382	0.1002	No
17	Yrdc	1777	0.381	0.1091	No
18	Cxcl10	1826	0.376	0.1159	No
19	Myc	1844	0.374	0.1242	No
20	Rhob	2041	0.357	0.1228	No
21	Fjx1	2067	0.355	0.1303	No
22	Slc2a6	2248	0.338	0.1293	No
23	Dusp1	2252	0.338	0.1374	No
24	Fosl1	2533	0.317	0.1308	No
25	Serpinb8	2567	0.316	0.1368	No
26	Nr4a1	2776	0.304	0.1335	No
27	Cd44	3088	0.283	0.1244	No
28	Dram1	3196	0.277	0.1257	No
29	Per1	3298	0.271	0.1271	No
30	Kdm6b	3311	0.270	0.1331	No
31	Ptpre	3317	0.269	0.1395	No
32	Tnip1	3388	0.265	0.1424	No
33	Gem	3852	0.238	0.1243	No
34	Jag1	4109	0.224	0.1166	No
35	Il15ra	4194	0.220	0.1177	No
36	Btg2	4231	0.219	0.1212	No
37	Bcl6	4498	0.205	0.1125	No
38	Cd80	4774	0.191	0.1030	No
39	Nr4a2	4818	0.189	0.1054	No
40	Ninj1	4850	0.188	0.1084	No
41	Sgk1	4872	0.187	0.1119	No
42	Ifit2	4962	0.182	0.1118	No
43	Tap1	5046	0.179	0.1119	No
44	Ccl5	5193	0.171	0.1085	No
45	Cebpb	5348	0.164	0.1046	No
46	Tnfaip2	5390	0.162	0.1065	No
47	Sat1	5401	0.162	0.1099	No
48	Plpp3	5478	0.158	0.1099	No
49	B4galt5	5710	0.147	0.1016	No
50	Tsc22d1	5732	0.146	0.1041	No
51	Il7r	5770	0.145	0.1057	No
52	Lif	5811	0.143	0.1072	No
53	Nfe2l2	5836	0.141	0.1094	No
54	Pnrc1	5839	0.141	0.1128	No
55	Smad3	6033	0.133	0.1061	No
56	Marcks	6117	0.129	0.1049	No
57	Btg3	6152	0.128	0.1063	No
58	Stat5a	6441	0.117	0.0943	No
59	Atp2b1	6576	0.113	0.0902	No
60	Jun	6818	0.103	0.0802	No
61	Birc3	6860	0.101	0.0806	No
62	Rnf19b	6960	0.098	0.0779	No
63	Slc2a3	7007	0.096	0.0779	No
64	Rcan1	7026	0.096	0.0793	No
65	Pmepa1	7043	0.095	0.0808	No
66	Gpr183	7130	0.092	0.0786	No
67	Gch1	7146	0.091	0.0801	No
68	Zc3h12a	7167	0.091	0.0813	No
69	Fos	7184	0.090	0.0827	No
70	Pdlim5	7426	0.081	0.0722	No
71	Olr1	7489	0.079	0.0710	No
72	Slc16a6	7573	0.075	0.0685	No
73	Ripk2	7747	0.069	0.0613	No
74	G0s2	8215	0.051	0.0384	No
75	Nfkbie	8233	0.050	0.0387	No
76	Il18	8406	0.043	0.0309	No
77	Kynu	8583	0.038	0.0228	No
78	Tiparp	8671	0.035	0.0191	No
79	Ppp1r15a	8860	0.029	0.0101	No
80	Fut4	8903	0.027	0.0086	No
81	Tnfaip8	8964	0.025	0.0061	No
82	Eif1	8981	0.025	0.0059	No
83	Id2	9196	0.017	-0.0047	No
84	Clcf1	9356	0.011	-0.0127	No
85	Tnip2	9516	0.005	-0.0208	No
86	Pfkfb3	9533	0.004	-0.0215	No
87	Nfkb2	9601	0.002	-0.0249	No
88	Phlda2	9673	-0.000	-0.0286	No
89	Tgif1	9708	-0.001	-0.0303	No
90	Sdc4	9819	-0.005	-0.0359	No
91	Ldlr	9971	-0.010	-0.0434	No
92	Klf9	9980	-0.010	-0.0436	No
93	Rel	10022	-0.012	-0.0454	No
94	Cebpd	10118	-0.016	-0.0499	No
95	Irs2	10200	-0.017	-0.0537	No
96	Sphk1	10323	-0.022	-0.0595	No
97	Lamb3	10376	-0.024	-0.0616	No
98	Tlr2	10431	-0.026	-0.0637	No
99	Dusp2	10573	-0.030	-0.0703	No
100	Dnajb4	10603	-0.032	-0.0710	No
101	Serpinb2	10935	-0.043	-0.0870	No
102	Snn	11060	-0.047	-0.0923	No
103	Mxd1	11073	-0.048	-0.0917	No
104	Tnf	11414	-0.059	-0.1078	No
105	Nfil3	11443	-0.060	-0.1078	No
106	Klf10	11742	-0.072	-0.1214	No
107	Birc2	11751	-0.072	-0.1201	No
108	B4galt1	11875	-0.076	-0.1246	No
109	Maff	12060	-0.083	-0.1320	No
110	Fosb	12383	-0.097	-0.1463	No
111	Plaur	12441	-0.099	-0.1468	No
112	Phlda1	12459	-0.100	-0.1452	No
113	Csf1	12478	-0.100	-0.1437	No
114	Cd83	12653	-0.107	-0.1501	No
115	Hbegf	13160	-0.128	-0.1731	No
116	Pde4b	13212	-0.130	-0.1725	No
117	Panx1	13267	-0.132	-0.1721	No
118	Sod2	13375	-0.138	-0.1742	No
119	Dennd5a	13394	-0.139	-0.1718	No
120	Efna1	13555	-0.145	-0.1765	No
121	Zbtb10	13619	-0.148	-0.1761	No
122	Cflar	13913	-0.159	-0.1873	No
123	Ccnl1	14163	-0.173	-0.1959	No
124	Gfpt2	14201	-0.174	-0.1936	No
125	Atf3	14507	-0.188	-0.2047	No
126	Cd69	14589	-0.192	-0.2042	No
127	Nfat5	14634	-0.194	-0.2017	No
128	Trib1	14715	-0.198	-0.2010	No
129	Klf2	14889	-0.206	-0.2049	No
130	Nfkb1	14922	-0.208	-0.2014	No
131	Tank	14983	-0.211	-0.1993	No
132	Map3k8	15521	-0.239	-0.2212	No
133	Mcl1	15721	-0.253	-0.2253	No
134	Ifih1	15997	-0.272	-0.2328	No
135	Rela	16184	-0.283	-0.2355	No
136	Icam1	16385	-0.294	-0.2385	No
137	Zfp36	16453	-0.299	-0.2347	No
138	Tnfaip3	16839	-0.324	-0.2466	Yes
139	Rigi	16895	-0.329	-0.2414	Yes
140	Hes1	16936	-0.332	-0.2353	Yes
141	Gadd45a	16945	-0.332	-0.2275	Yes
142	Litaf	17142	-0.347	-0.2291	Yes
143	Plau	17238	-0.356	-0.2253	Yes
144	Trip10	17271	-0.358	-0.2181	Yes
145	Il6st	17274	-0.359	-0.2094	Yes
146	Irf1	17466	-0.375	-0.2101	Yes
147	Nampt	17526	-0.382	-0.2037	Yes
148	Tnfrsf9	17536	-0.382	-0.1948	Yes
149	Nfkbia	17770	-0.402	-0.1970	Yes
150	Icosl	17812	-0.406	-0.1891	Yes
151	Bhlhe40	18045	-0.434	-0.1904	Yes
152	Sqstm1	18336	-0.471	-0.1938	Yes
153	Ets2	18483	-0.493	-0.1892	Yes
154	Ifngr2	18652	-0.518	-0.1852	Yes
155	Cdkn1a	18710	-0.528	-0.1752	Yes
156	Ptger4	18717	-0.529	-0.1625	Yes
157	Relb	19009	-0.598	-0.1628	Yes
158	Plk2	19015	-0.600	-0.1483	Yes
159	Abca1	19026	-0.606	-0.1339	Yes
160	Spsb1	19085	-0.626	-0.1215	Yes
161	Klf6	19134	-0.643	-0.1082	Yes
162	Traf1	19154	-0.649	-0.0932	Yes
163	Socs3	19201	-0.670	-0.0791	Yes
164	Junb	19301	-0.726	-0.0664	Yes
165	Bcl3	19319	-0.736	-0.0492	Yes
166	Ier3	19335	-0.747	-0.0316	Yes
167	Ier5	19370	-0.771	-0.0144	Yes
168	Ptgs2	19444	-0.881	0.0035	Yes