Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | MPP.MPP_Pheno.cls#Group1_versus_Group2.MPP_Pheno.cls#Group1_versus_Group2_repos |
| Phenotype | MPP_Pheno.cls#Group1_versus_Group2_repos |
| Upregulated in class | 1 |
| GeneSet | HALLMARK_TGF_BETA_SIGNALING |
| Enrichment Score (ES) | -0.26412004 |
| Normalized Enrichment Score (NES) | -1.133262 |
| Nominal p-value | 0.30538923 |
| FDR q-value | 0.8067703 |
| FWER p-Value | 0.966 |
| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Bmpr1a | 242 | 0.678 | 0.0514 | No |
| 2 | Slc20a1 | 904 | 0.489 | 0.0634 | No |
| 3 | Cdkn1c | 1564 | 0.403 | 0.0676 | No |
| 4 | Ncor2 | 1627 | 0.397 | 0.1017 | No |
| 5 | Smad6 | 2331 | 0.331 | 0.0968 | No |
| 6 | Thbs1 | 2336 | 0.331 | 0.1277 | No |
| 7 | Hdac1 | 3341 | 0.268 | 0.1013 | No |
| 8 | Trim33 | 3486 | 0.259 | 0.1182 | No |
| 9 | Hipk2 | 3731 | 0.245 | 0.1287 | No |
| 10 | Ski | 4236 | 0.219 | 0.1234 | No |
| 11 | Sptbn1 | 5327 | 0.165 | 0.0830 | No |
| 12 | Ppm1a | 5624 | 0.151 | 0.0820 | No |
| 13 | Eng | 5926 | 0.138 | 0.0795 | No |
| 14 | Smad3 | 6033 | 0.133 | 0.0866 | No |
| 15 | Bmpr2 | 6844 | 0.102 | 0.0545 | No |
| 16 | Furin | 6901 | 0.100 | 0.0611 | No |
| 17 | Pmepa1 | 7043 | 0.095 | 0.0628 | No |
| 18 | Fkbp1a | 7516 | 0.077 | 0.0458 | No |
| 19 | Apc | 7810 | 0.067 | 0.0371 | No |
| 20 | Ctnnb1 | 8251 | 0.050 | 0.0191 | No |
| 21 | Ppp1r15a | 8860 | 0.029 | -0.0094 | No |
| 22 | Id2 | 9196 | 0.017 | -0.0250 | No |
| 23 | Skil | 9234 | 0.015 | -0.0255 | No |
| 24 | Fnta | 9482 | 0.006 | -0.0376 | No |
| 25 | Tgif1 | 9708 | -0.001 | -0.0491 | No |
| 26 | Smurf2 | 9963 | -0.010 | -0.0612 | No |
| 27 | Bcar3 | 10442 | -0.026 | -0.0833 | No |
| 28 | Map3k7 | 10652 | -0.033 | -0.0909 | No |
| 29 | Cdk9 | 10948 | -0.043 | -0.1019 | No |
| 30 | Tgfbr1 | 11152 | -0.051 | -0.1076 | No |
| 31 | Acvr1 | 11409 | -0.059 | -0.1152 | No |
| 32 | Klf10 | 11742 | -0.072 | -0.1255 | No |
| 33 | Tgfb1 | 12041 | -0.082 | -0.1331 | No |
| 34 | Rab31 | 12202 | -0.089 | -0.1329 | No |
| 35 | Rhoa | 12844 | -0.114 | -0.1551 | No |
| 36 | Xiap | 13157 | -0.128 | -0.1591 | No |
| 37 | Id1 | 13191 | -0.129 | -0.1486 | No |
| 38 | Ltbp2 | 13707 | -0.151 | -0.1609 | No |
| 39 | Arid4b | 13820 | -0.155 | -0.1521 | No |
| 40 | Ube2d3 | 14893 | -0.206 | -0.1878 | No |
| 41 | Smad1 | 15596 | -0.244 | -0.2009 | No |
| 42 | Cdh1 | 16604 | -0.309 | -0.2235 | No |
| 43 | Smad7 | 17396 | -0.369 | -0.2294 | Yes |
| 44 | Ppp1ca | 17687 | -0.394 | -0.2072 | Yes |
| 45 | Smurf1 | 18446 | -0.486 | -0.2004 | Yes |
| 46 | Ifngr2 | 18652 | -0.518 | -0.1622 | Yes |
| 47 | Tjp1 | 19257 | -0.698 | -0.1275 | Yes |
| 48 | Junb | 19301 | -0.726 | -0.0614 | Yes |
| 49 | Wwtr1 | 19364 | -0.766 | 0.0076 | Yes |
