| Dataset | MPP.MPP_Pheno.cls#Group1_versus_Group2.MPP_Pheno.cls#Group1_versus_Group2_repos |
| Phenotype | MPP_Pheno.cls#Group1_versus_Group2_repos |
| Upregulated in class | 1 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.22918439 |
| Normalized Enrichment Score (NES) | -1.0368462 |
| Nominal p-value | 0.4085603 |
| FDR q-value | 0.8487726 |
| FWER p-Value | 0.995 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Slc7a5 | 243 | 0.677 | 0.0053 | No |
| 2 | Gale | 304 | 0.644 | 0.0192 | No |
| 3 | Dlg5 | 321 | 0.635 | 0.0352 | No |
| 4 | Klf4 | 367 | 0.611 | 0.0490 | No |
| 5 | St14 | 389 | 0.605 | 0.0639 | No |
| 6 | Tst | 518 | 0.564 | 0.0721 | No |
| 7 | Hspb8 | 541 | 0.557 | 0.0857 | No |
| 8 | Opn3 | 587 | 0.547 | 0.0978 | No |
| 9 | Bcl2 | 744 | 0.518 | 0.1035 | No |
| 10 | Tob1 | 1021 | 0.474 | 0.1017 | No |
| 11 | Ccnd1 | 1025 | 0.474 | 0.1141 | No |
| 12 | Pgr | 1058 | 0.467 | 0.1248 | No |
| 13 | Isg20 | 1309 | 0.432 | 0.1232 | No |
| 14 | Prkar2b | 1440 | 0.417 | 0.1275 | No |
| 15 | Slc26a2 | 1467 | 0.414 | 0.1371 | No |
| 16 | Ncor2 | 1627 | 0.397 | 0.1394 | No |
| 17 | Chst8 | 2013 | 0.360 | 0.1290 | No |
| 18 | Chpt1 | 2370 | 0.329 | 0.1193 | No |
| 19 | Cav1 | 2704 | 0.307 | 0.1102 | No |
| 20 | Ltf | 2850 | 0.299 | 0.1106 | No |
| 21 | Cd44 | 3088 | 0.283 | 0.1058 | No |
| 22 | Mapt | 3189 | 0.277 | 0.1079 | No |
| 23 | Llgl2 | 3445 | 0.261 | 0.1016 | No |
| 24 | Impa2 | 3474 | 0.259 | 0.1070 | No |
| 25 | Tiam1 | 3533 | 0.255 | 0.1108 | No |
| 26 | Mdk | 3555 | 0.254 | 0.1164 | No |
| 27 | Plaat3 | 3718 | 0.246 | 0.1145 | No |
| 28 | Snx10 | 3772 | 0.242 | 0.1182 | No |
| 29 | Gins2 | 3785 | 0.241 | 0.1239 | No |
| 30 | Siah2 | 3953 | 0.234 | 0.1215 | No |
| 31 | Sult2b1 | 4227 | 0.219 | 0.1131 | No |
| 32 | Car2 | 4257 | 0.218 | 0.1174 | No |
| 33 | Clic3 | 4349 | 0.213 | 0.1183 | No |
| 34 | Wfs1 | 4390 | 0.211 | 0.1218 | No |
| 35 | Olfm1 | 4643 | 0.197 | 0.1140 | No |
| 36 | Sgk1 | 4872 | 0.187 | 0.1071 | No |
| 37 | Fdft1 | 5119 | 0.175 | 0.0990 | No |
| 38 | Fkbp4 | 5160 | 0.173 | 0.1015 | No |
| 39 | Add3 | 5354 | 0.164 | 0.0959 | No |
| 40 | Abhd2 | 5549 | 0.155 | 0.0899 | No |
| 41 | Xrcc3 | 5551 | 0.155 | 0.0940 | No |
| 42 | Prlr | 5852 | 0.141 | 0.0822 | No |
| 43 | Dnajc1 | 6053 | 0.132 | 0.0753 | No |
| 44 | Atp2b4 | 6087 | 0.130 | 0.0771 | No |
| 45 | Cdc6 | 6107 | 0.129 | 0.0795 | No |
| 46 | Nrip1 | 6146 | 0.128 | 0.0809 | No |
| 47 | Btg3 | 6152 | 0.128 | 0.0840 | No |
| 48 | Ppif | 6421 | 0.118 | 0.0733 | No |
| 49 | Scube2 | 6493 | 0.115 | 0.0726 | No |
| 50 | Prss23 | 6498 | 0.115 | 0.0755 | No |
| 51 | Tnnc1 | 6679 | 0.108 | 0.0690 | No |
| 52 | Fkbp5 | 6836 | 0.102 | 0.0637 | No |
| 53 | Blvrb | 7015 | 0.096 | 0.0570 | No |
| 54 | Scarb1 | 7053 | 0.095 | 0.0576 | No |
| 55 | Ptpn6 | 7112 | 0.093 | 0.0571 | No |
| 56 | Fos | 7184 | 0.090 | 0.0558 | No |
| 57 | Gjb3 | 7326 | 0.084 | 0.0507 | No |
| 58 | Dhcr7 | 7368 | 0.083 | 0.0508 | No |
| 59 | Sfn | 7544 | 0.076 | 0.0438 | No |
| 60 | Jak2 | 8057 | 0.058 | 0.0188 | No |
| 61 | Plxnb1 | 8069 | 0.057 | 0.0198 | No |
| 62 | Mettl3 | 8206 | 0.051 | 0.0141 | No |
| 63 | Fabp5 | 8421 | 0.043 | 0.0042 | No |
| 64 | Slc27a2 | 8538 | 0.040 | -0.0008 | No |
| 65 | Myb | 8706 | 0.034 | -0.0085 | No |
| 66 | Amfr | 8726 | 0.033 | -0.0086 | No |
| 67 | Hspa4l | 8744 | 0.033 | -0.0086 | No |
| 68 | Papss2 | 8857 | 0.029 | -0.0136 | No |
| 69 | Tfpi2 | 8932 | 0.026 | -0.0168 | No |
| 70 | Pdcd4 | 9138 | 0.019 | -0.0269 | No |
| 71 | Id2 | 9196 | 0.017 | -0.0294 | No |
| 72 | Cyp26b1 | 9394 | 0.009 | -0.0393 | No |
| 73 | Tmprss3 | 9470 | 0.007 | -0.0430 | No |
| 74 | Gfus | 9581 | 0.002 | -0.0486 | No |
| 75 | Cxcl12 | 9664 | 0.000 | -0.0529 | No |
| 76 | Ptger3 | 9693 | -0.001 | -0.0543 | No |
| 77 | Jak1 | 9772 | -0.004 | -0.0582 | No |
| 78 | Itpk1 | 10278 | -0.020 | -0.0838 | No |
| 79 | Mapk13 | 10320 | -0.022 | -0.0853 | No |
| 80 | Dusp2 | 10573 | -0.030 | -0.0975 | No |
| 81 | Ckb | 10934 | -0.043 | -0.1150 | No |
| 82 | Large1 | 11194 | -0.051 | -0.1270 | No |
| 83 | Ptges | 11274 | -0.055 | -0.1297 | No |
| 84 | Emp2 | 11381 | -0.058 | -0.1336 | No |
| 85 | Rabep1 | 11589 | -0.065 | -0.1426 | No |
| 86 | Rps6ka2 | 11674 | -0.069 | -0.1451 | No |
| 87 | Gper1 | 11746 | -0.072 | -0.1469 | No |
| 88 | Tpd52l1 | 11799 | -0.074 | -0.1476 | No |
| 89 | Rnaseh2a | 11859 | -0.076 | -0.1487 | No |
| 90 | Stil | 11878 | -0.076 | -0.1476 | No |
| 91 | Rab31 | 12202 | -0.089 | -0.1619 | No |
| 92 | Bag1 | 12250 | -0.091 | -0.1619 | No |
| 93 | Slc24a3 | 12397 | -0.097 | -0.1669 | No |
| 94 | Cd9 | 12553 | -0.103 | -0.1722 | No |
| 95 | Sord | 12567 | -0.104 | -0.1701 | No |
| 96 | Anxa9 | 12569 | -0.104 | -0.1674 | No |
| 97 | Slc16a1 | 12723 | -0.110 | -0.1724 | No |
| 98 | St6galnac2 | 12812 | -0.113 | -0.1740 | No |
| 99 | Cdc20 | 13418 | -0.139 | -0.2016 | No |
| 100 | Idh2 | 13419 | -0.139 | -0.1979 | No |
| 101 | Mest | 13430 | -0.140 | -0.1947 | No |
| 102 | Plk4 | 13437 | -0.140 | -0.1913 | No |
| 103 | Perp | 13639 | -0.149 | -0.1978 | No |
| 104 | Tspan13 | 13758 | -0.153 | -0.1999 | No |
| 105 | Aff1 | 13846 | -0.156 | -0.2002 | No |
| 106 | Gla | 13920 | -0.160 | -0.1998 | No |
| 107 | Xbp1 | 14065 | -0.167 | -0.2028 | No |
| 108 | Dnajc12 | 14231 | -0.176 | -0.2067 | No |
| 109 | Ugdh | 14315 | -0.180 | -0.2062 | No |
| 110 | Elovl5 | 14416 | -0.184 | -0.2065 | No |
| 111 | Abca3 | 14689 | -0.196 | -0.2154 | No |
| 112 | Homer2 | 14709 | -0.197 | -0.2112 | No |
| 113 | Slc22a5 | 14713 | -0.198 | -0.2061 | No |
| 114 | Batf | 14932 | -0.208 | -0.2119 | No |
| 115 | Frk | 15027 | -0.213 | -0.2111 | No |
| 116 | Celsr2 | 15134 | -0.218 | -0.2108 | No |
| 117 | Pdzk1 | 15490 | -0.237 | -0.2229 | Yes |
| 118 | Etfb | 15567 | -0.242 | -0.2205 | Yes |
| 119 | Car12 | 15604 | -0.245 | -0.2159 | Yes |
| 120 | Slc29a1 | 15617 | -0.246 | -0.2100 | Yes |
| 121 | Aldh3b1 | 15694 | -0.251 | -0.2073 | Yes |
| 122 | Aldh3a2 | 15909 | -0.265 | -0.2113 | Yes |
| 123 | Kif20a | 15924 | -0.266 | -0.2050 | Yes |
| 124 | S100a9 | 16092 | -0.278 | -0.2063 | Yes |
| 125 | Dcxr | 16387 | -0.295 | -0.2137 | Yes |
| 126 | Lsr | 16401 | -0.296 | -0.2066 | Yes |
| 127 | Nab2 | 16430 | -0.298 | -0.2002 | Yes |
| 128 | Zfp36 | 16453 | -0.299 | -0.1935 | Yes |
| 129 | Cdh1 | 16604 | -0.309 | -0.1930 | Yes |
| 130 | Scnn1a | 16613 | -0.310 | -0.1853 | Yes |
| 131 | Slc2a8 | 16623 | -0.310 | -0.1776 | Yes |
| 132 | Top2a | 16758 | -0.318 | -0.1761 | Yes |
| 133 | Rbbp8 | 16840 | -0.324 | -0.1717 | Yes |
| 134 | Tpbg | 17255 | -0.358 | -0.1837 | Yes |
| 135 | Il6st | 17274 | -0.359 | -0.1751 | Yes |
| 136 | Rapgefl1 | 17279 | -0.359 | -0.1659 | Yes |
| 137 | Unc13b | 17549 | -0.383 | -0.1697 | Yes |
| 138 | Flnb | 17590 | -0.387 | -0.1615 | Yes |
| 139 | Farp1 | 17619 | -0.389 | -0.1527 | Yes |
| 140 | Igfbp4 | 17645 | -0.392 | -0.1436 | Yes |
| 141 | Kcnk5 | 17882 | -0.414 | -0.1449 | Yes |
| 142 | Cacna2d2 | 17924 | -0.419 | -0.1359 | Yes |
| 143 | Slc1a4 | 18009 | -0.430 | -0.1289 | Yes |
| 144 | Fgfr3 | 18091 | -0.440 | -0.1215 | Yes |
| 145 | Myof | 18190 | -0.450 | -0.1147 | Yes |
| 146 | Dynlt3 | 18349 | -0.472 | -0.1104 | Yes |
| 147 | Tjp3 | 18380 | -0.476 | -0.0994 | Yes |
| 148 | Ass1 | 18413 | -0.481 | -0.0883 | Yes |
| 149 | Arl3 | 18591 | -0.507 | -0.0841 | Yes |
| 150 | Plac1 | 18700 | -0.526 | -0.0758 | Yes |
| 151 | Mocs2 | 18895 | -0.567 | -0.0708 | Yes |
| 152 | Il17rb | 18948 | -0.582 | -0.0582 | Yes |
| 153 | Pkp3 | 19034 | -0.609 | -0.0465 | Yes |
| 154 | Cox6c | 19048 | -0.612 | -0.0310 | Yes |
| 155 | Ret | 19120 | -0.638 | -0.0178 | Yes |
| 156 | Cish | 19202 | -0.670 | -0.0043 | Yes |
| 157 | Nxt1 | 19367 | -0.769 | 0.0075 | Yes |

