Details for gene set HALLMARK_EPITHELIAL_MESENCHYMAL

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group1_versus_Group2.MPP_Pheno.cls#Group1_versus_Group2_repos
Phenotype	MPP_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION
Enrichment Score (ES)	-0.25612432
Normalized Enrichment Score (NES)	-1.0432287
Nominal p-value	0.35589942
FDR q-value	0.8774369
FWER p-Value	0.995

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cap2	188	0.709	0.0099	No
2	Gpx7	252	0.670	0.0252	No
3	Fgf2	340	0.625	0.0381	No
4	Tagln	355	0.618	0.0545	No
5	Itga2	378	0.609	0.0702	No
6	Fstl3	439	0.588	0.0834	No
7	Eno2	536	0.559	0.0939	No
8	Nt5e	563	0.552	0.1079	No
9	Gpc1	606	0.544	0.1208	No
10	Glipr1	739	0.519	0.1283	No
11	Colgalt1	751	0.517	0.1421	No
12	Timp3	1163	0.453	0.1334	No
13	Vegfa	1352	0.426	0.1355	No
14	Sfrp4	1399	0.421	0.1448	No
15	Slit2	1541	0.407	0.1488	No
16	Col11a1	1653	0.394	0.1540	No
17	Gadd45b	1714	0.388	0.1616	No
18	Notch2	1895	0.369	0.1626	No
19	Rhob	2041	0.357	0.1650	No
20	Thbs1	2336	0.331	0.1590	No
21	Matn2	2614	0.313	0.1533	No
22	Abi3bp	2766	0.305	0.1540	No
23	P3h1	2773	0.304	0.1621	No
24	Edil3	2928	0.294	0.1623	No
25	Dcn	3063	0.285	0.1632	No
26	Cd44	3088	0.283	0.1698	No
27	Serpine2	3261	0.273	0.1685	No
28	Bgn	3277	0.272	0.1753	No
29	Sgcd	3391	0.265	0.1768	No
30	Mmp14	3702	0.247	0.1676	No
31	Gem	3852	0.238	0.1665	No
32	Col16a1	3933	0.235	0.1689	No
33	Postn	4280	0.216	0.1570	No
34	Col7a1	4293	0.216	0.1624	No
35	Pcolce	4533	0.203	0.1557	No
36	Lama1	4537	0.203	0.1611	No
37	Sntb1	4842	0.188	0.1506	No
38	Sdc1	5311	0.166	0.1311	No
39	Sat1	5401	0.162	0.1310	No
40	Flna	6113	0.129	0.0978	No
41	Itgb3	6141	0.128	0.1000	No
42	Vegfc	6188	0.126	0.1011	No
43	Fzd8	6393	0.118	0.0938	No
44	Ecm2	6472	0.115	0.0930	No
45	Jun	6818	0.103	0.0781	No
46	Pmepa1	7043	0.095	0.0691	No
47	Wipf1	7095	0.093	0.0691	No
48	Itgb5	7101	0.093	0.0714	No
49	Cdh11	7305	0.085	0.0633	No
50	Fbn1	7737	0.069	0.0430	No
51	Pdlim4	7838	0.065	0.0396	No
52	Pdgfrb	7995	0.060	0.0332	No
53	Dab2	8300	0.047	0.0189	No
54	Anpep	8633	0.036	0.0027	No
55	Il15	8704	0.034	0.0001	No
56	Ecm1	8718	0.034	0.0003	No
57	Cald1	8741	0.033	0.0001	No
58	Ntm	8762	0.032	-0.0000	No
59	Plod2	8807	0.031	-0.0014	No
60	Col8a2	8861	0.029	-0.0034	No
61	Lama2	8931	0.026	-0.0062	No
62	Tfpi2	8932	0.026	-0.0055	No
63	Fuca1	9145	0.018	-0.0159	No
64	Pfn2	9148	0.018	-0.0155	No
65	Id2	9196	0.017	-0.0175	No
66	Cxcl12	9664	0.000	-0.0416	No
67	Mmp2	9697	-0.001	-0.0432	No
68	Cdh2	9763	-0.003	-0.0465	No
69	Sdc4	9819	-0.005	-0.0492	No
70	Fas	10267	-0.020	-0.0717	No
71	Fstl1	10663	-0.034	-0.0912	No
72	Itgb1	10876	-0.041	-0.1010	No
73	Nid2	10953	-0.044	-0.1037	No
74	Bmp1	11014	-0.046	-0.1055	No
75	Slc6a8	11155	-0.051	-0.1113	No
76	Col1a2	11239	-0.053	-0.1142	No
77	Cadm1	11299	-0.056	-0.1157	No
78	Calu	11433	-0.060	-0.1209	No
79	Lamc1	11537	-0.064	-0.1244	No
80	Col1a1	11546	-0.064	-0.1231	No
81	Tgfb1	12041	-0.082	-0.1463	No
82	Plaur	12441	-0.099	-0.1641	No
83	Col5a3	12484	-0.100	-0.1635	No
84	Mcm7	12511	-0.101	-0.1621	No
85	Efemp2	12559	-0.103	-0.1616	No
86	Col12a1	12994	-0.122	-0.1807	No
87	Pvr	13183	-0.129	-0.1868	No
88	Mest	13430	-0.140	-0.1956	No
89	Spock1	13669	-0.150	-0.2037	No
90	Qsox1	13740	-0.152	-0.2032	No
91	Adam12	13752	-0.152	-0.1995	No
92	Comp	14081	-0.168	-0.2118	No
93	Tgm2	14646	-0.194	-0.2355	No
94	Dst	14729	-0.198	-0.2343	No
95	Gja1	14764	-0.199	-0.2305	No
96	Serpinh1	14775	-0.200	-0.2255	No
97	Tpm1	14807	-0.201	-0.2215	No
98	Plod1	15339	-0.229	-0.2425	No
99	Mylk	15603	-0.245	-0.2493	Yes
100	Copa	15606	-0.245	-0.2427	Yes
101	Slit3	15611	-0.246	-0.2361	Yes
102	Col4a2	15672	-0.250	-0.2322	Yes
103	Fbln1	15710	-0.252	-0.2272	Yes
104	Plod3	15808	-0.258	-0.2250	Yes
105	Tpm2	15897	-0.264	-0.2222	Yes
106	Vim	15898	-0.264	-0.2149	Yes
107	Cdh6	16096	-0.278	-0.2174	Yes
108	Basp1	16137	-0.280	-0.2117	Yes
109	Dpysl3	16201	-0.284	-0.2071	Yes
110	Loxl1	16359	-0.292	-0.2071	Yes
111	Vcam1	16406	-0.296	-0.2013	Yes
112	Itga5	16533	-0.303	-0.1994	Yes
113	Itgav	16538	-0.303	-0.1912	Yes
114	Tnfaip3	16839	-0.324	-0.1977	Yes
115	Gadd45a	16945	-0.332	-0.1940	Yes
116	Sgcb	17101	-0.344	-0.1924	Yes
117	Magee1	17407	-0.370	-0.1979	Yes
118	Tnfrsf12a	17514	-0.380	-0.1929	Yes
119	Vcan	17642	-0.391	-0.1886	Yes
120	Igfbp4	17645	-0.392	-0.1779	Yes
121	Fap	17660	-0.392	-0.1677	Yes
122	Col5a2	17706	-0.396	-0.1591	Yes
123	Col5a1	17752	-0.401	-0.1503	Yes
124	Emp3	17806	-0.406	-0.1418	Yes
125	Tgfbi	18108	-0.442	-0.1451	Yes
126	Fn1	18121	-0.444	-0.1334	Yes
127	Thy1	18185	-0.450	-0.1242	Yes
128	Sfrp1	18231	-0.457	-0.1139	Yes
129	Lrp1	18359	-0.473	-0.1073	Yes
130	Spp1	18489	-0.494	-0.1003	Yes
131	Ppib	18514	-0.498	-0.0877	Yes
132	Sparc	18569	-0.504	-0.0766	Yes
133	Capg	18610	-0.511	-0.0645	Yes
134	Col4a1	18684	-0.523	-0.0538	Yes
135	Thbs2	18688	-0.523	-0.0394	Yes
136	Lama3	19196	-0.668	-0.0471	Yes
137	Tpm4	19299	-0.725	-0.0323	Yes
138	Lgals1	19328	-0.739	-0.0132	Yes
139	Tgfbr3	19403	-0.819	0.0056	Yes