Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MPP.MPP_Pheno.cls#Group1_versus_Group2.MPP_Pheno.cls#Group1_versus_Group2_repos
Phenotype	MPP_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.24294329
Normalized Enrichment Score (NES)	-1.1534749
Nominal p-value	0.17692308
FDR q-value	0.88240355
FWER p-Value	0.96

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Dgkh	114	0.783	0.0167	No
2	Plek	144	0.750	0.0369	No
3	Dgkg	336	0.627	0.0451	No
4	Pdgfb	527	0.561	0.0515	No
5	Src	529	0.561	0.0676	No
6	Ehd1	804	0.507	0.0681	No
7	Prss36	892	0.491	0.0777	No
8	Prdm4	1057	0.468	0.0827	No
9	C1qc	1240	0.441	0.0861	No
10	Dusp5	1322	0.431	0.0943	No
11	Ang	1403	0.421	0.1023	No
12	Dusp6	1474	0.413	0.1106	No
13	Hnf4a	1620	0.398	0.1146	No
14	Spock2	1705	0.388	0.1215	No
15	Rabif	1987	0.362	0.1174	No
16	Gca	2241	0.339	0.1141	No
17	Ltf	2850	0.299	0.0913	No
18	Pik3cg	2887	0.297	0.0980	No
19	Itgam	2923	0.294	0.1047	No
20	Rbsn	3096	0.282	0.1039	No
21	C2	3191	0.277	0.1071	No
22	Phex	3315	0.269	0.1085	No
23	Cr2	3351	0.267	0.1144	No
24	Cpm	3491	0.258	0.1147	No
25	Brpf3	3697	0.247	0.1112	No
26	Mmp14	3702	0.247	0.1181	No
27	F8	4156	0.222	0.1011	No
28	Car2	4257	0.218	0.1022	No
29	Xpnpep1	4335	0.214	0.1044	No
30	Pdp1	4695	0.194	0.0914	No
31	Ctso	4862	0.187	0.0883	No
32	F5	5111	0.175	0.0805	No
33	Ccl5	5193	0.171	0.0813	No
34	Klkb1	5251	0.169	0.0832	No
35	Cebpb	5348	0.164	0.0830	No
36	Timp2	5452	0.159	0.0822	No
37	Dyrk2	5741	0.146	0.0716	No
38	Msrb1	5783	0.144	0.0736	No
39	Gpd2	5951	0.137	0.0689	No
40	Kcnip3	6165	0.127	0.0616	No
41	Zeb1	6338	0.120	0.0562	No
42	Lck	6569	0.113	0.0475	No
43	Gp9	6711	0.107	0.0433	No
44	Gmfb	6744	0.105	0.0447	No
45	Ctsl	6757	0.105	0.0471	No
46	Rce1	6773	0.104	0.0494	No
47	Cdk5r1	6808	0.103	0.0506	No
48	Fcer1g	6906	0.100	0.0484	No
49	Cblb	6988	0.097	0.0470	No
50	Anxa5	7191	0.090	0.0392	No
51	Usp15	7307	0.085	0.0357	No
52	Olr1	7489	0.079	0.0287	No
53	Prkcd	7630	0.073	0.0235	No
54	Casp3	7890	0.063	0.0120	No
55	Hspa1a	7928	0.062	0.0119	No
56	Jak2	8057	0.058	0.0069	No
57	Rhog	8575	0.038	-0.0187	No
58	Kynu	8583	0.038	-0.0180	No
59	Gnb4	8587	0.038	-0.0170	No
60	Scg3	8758	0.033	-0.0249	No
61	Tfpi2	8932	0.026	-0.0330	No
62	Akap10	8941	0.026	-0.0327	No
63	Kif2a	9117	0.019	-0.0412	No
64	Dock10	9291	0.013	-0.0498	No
65	Psen1	9330	0.012	-0.0514	No
66	Prep	9347	0.011	-0.0519	No
67	Gng2	9463	0.007	-0.0576	No
68	Irf7	9499	0.005	-0.0593	No
69	Cd46	9626	0.001	-0.0658	No
70	Usp16	9765	-0.003	-0.0728	No
71	Gnai2	9784	-0.004	-0.0736	No
72	Prcp	9792	-0.004	-0.0739	No
73	Usp8	9953	-0.010	-0.0818	No
74	Pfn1	10236	-0.019	-0.0959	No
75	Grb2	10247	-0.019	-0.0958	No
76	Lta4h	10294	-0.020	-0.0976	No
77	Pla2g4a	10306	-0.021	-0.0976	No
78	Casp7	10333	-0.022	-0.0983	No
79	Actn2	10416	-0.026	-0.1018	No
80	Usp14	10499	-0.028	-0.1052	No
81	Lyn	10654	-0.033	-0.1122	No
82	Casp9	10730	-0.036	-0.1150	No
83	Gnb2	10769	-0.037	-0.1159	No
84	Rnf4	10830	-0.040	-0.1179	No
85	Irf2	10910	-0.042	-0.1207	No
86	Serpinb2	10935	-0.043	-0.1207	No
87	Gnai3	10947	-0.043	-0.1201	No
88	Pim1	11192	-0.051	-0.1312	No
89	Lcp2	11305	-0.056	-0.1354	No
90	Pik3ca	11405	-0.059	-0.1388	No
91	Dpp4	11503	-0.062	-0.1420	No
92	Serpinc1	11507	-0.063	-0.1403	No
93	Ppp2cb	11644	-0.068	-0.1454	No
94	Lipa	12012	-0.081	-0.1620	No
95	F10	12045	-0.082	-0.1613	No
96	Maff	12060	-0.083	-0.1596	No
97	Psmb9	12133	-0.086	-0.1609	No
98	Cdh13	12205	-0.089	-0.1620	No
99	Plaur	12441	-0.099	-0.1712	No
100	Me1	12529	-0.102	-0.1728	No
101	C9	12585	-0.104	-0.1726	No
102	Lgals3	12765	-0.111	-0.1787	No
103	Fyn	12766	-0.111	-0.1755	No
104	Ctsh	12921	-0.118	-0.1800	No
105	Calm1	13075	-0.124	-0.1843	No
106	Casp1	13392	-0.138	-0.1967	No
107	Vcpip1	13446	-0.141	-0.1953	No
108	Stx4a	13698	-0.150	-0.2040	No
109	Raf1	13757	-0.153	-0.2026	No
110	Cd36	13837	-0.156	-0.2021	No
111	Fdx1	13845	-0.156	-0.1980	No
112	Was	13933	-0.161	-0.1979	No
113	Cpq	14007	-0.165	-0.1969	No
114	Zfpm2	14043	-0.166	-0.1939	No
115	Cp	14321	-0.180	-0.2030	No
116	Clu	14497	-0.187	-0.2066	No
117	Csrp1	14936	-0.208	-0.2232	No
118	Sh2b3	15104	-0.216	-0.2256	No
119	Ctsc	15440	-0.234	-0.2362	Yes
120	Ctsd	15499	-0.238	-0.2323	Yes
121	Sirt6	15664	-0.249	-0.2336	Yes
122	Col4a2	15672	-0.250	-0.2268	Yes
123	Lamp2	15695	-0.251	-0.2207	Yes
124	Cfb	15746	-0.254	-0.2159	Yes
125	Kcnip2	15782	-0.257	-0.2103	Yes
126	C3	15933	-0.267	-0.2104	Yes
127	S100a13	15941	-0.268	-0.2030	Yes
128	Atox1	15982	-0.271	-0.1973	Yes
129	S100a9	16092	-0.278	-0.1949	Yes
130	Adam9	16148	-0.281	-0.1896	Yes
131	L3mbtl4	16536	-0.303	-0.2009	Yes
132	Tnfaip3	16839	-0.324	-0.2071	Yes
133	Gata3	16960	-0.333	-0.2037	Yes
134	Hspa5	17289	-0.359	-0.2103	Yes
135	Pik3r5	17383	-0.369	-0.2044	Yes
136	Irf1	17466	-0.375	-0.1979	Yes
137	Plscr1	17731	-0.399	-0.2000	Yes
138	Dock4	17772	-0.402	-0.1905	Yes
139	Cda	17896	-0.415	-0.1848	Yes
140	Gzmk	18115	-0.443	-0.1833	Yes
141	Fn1	18121	-0.444	-0.1707	Yes
142	Calm3	18253	-0.459	-0.1643	Yes
143	Ppp4c	18348	-0.472	-0.1555	Yes
144	Lrp1	18359	-0.473	-0.1424	Yes
145	Ctsb	18379	-0.476	-0.1296	Yes
146	Dock9	18392	-0.478	-0.1164	Yes
147	C1qa	18448	-0.486	-0.1053	Yes
148	Lap3	18679	-0.522	-0.1021	Yes
149	Mmp15	18701	-0.526	-0.0880	Yes
150	Ctss	18859	-0.558	-0.0800	Yes
151	Notch4	18865	-0.559	-0.0641	Yes
152	Casp4	19027	-0.606	-0.0549	Yes
153	Gngt2	19115	-0.637	-0.0410	Yes
154	Lgmn	19129	-0.641	-0.0232	Yes
155	Pclo	19276	-0.710	-0.0103	Yes
156	Gp1ba	19375	-0.777	0.0071	Yes