DatasetMEP.MEP.mega_Pheno.cls
#Group6_versus_Group8.MEP.mega_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeMEP.mega_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.4964502
Normalized Enrichment Score (NES)-1.6122798
Nominal p-value0.024390243
FDR q-value0.19412142
FWER p-Value0.198
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Mpo4590.6020.0258No
2Nqo110140.4840.0370No
3Sbno236520.249-0.0793No
4Abcc150180.183-0.1351No
5Msra55060.162-0.1470No
6Ercc267670.109-0.2034No
7Pfkp70100.101-0.2077No
8Gsr77490.072-0.2400No
9Mbp82850.051-0.2636No
10Oxsr184520.045-0.2685No
11Scaf484730.044-0.2659No
12Gclm10004-0.003-0.3451No
13G6pdx10049-0.005-0.3470No
14Ipcef110132-0.007-0.3506No
15Hmox210209-0.010-0.3537No
16Gclc10260-0.012-0.3553No
17Stk2511204-0.045-0.4006No
18Ndufs211488-0.056-0.4106No
19Prnp11741-0.064-0.4184No
20Srxn111867-0.069-0.4192No
21Txnrd112037-0.075-0.4218No
22Pdlim112697-0.104-0.4475No
23Prdx412918-0.112-0.4496No
24Selenos13579-0.141-0.4722No
25Ptpa13794-0.152-0.4708No
26Gpx413874-0.155-0.4621No
27Cat14537-0.185-0.4812Yes
28Txn114550-0.185-0.4665Yes
29Glrx14574-0.186-0.4523Yes
30Ftl115293-0.225-0.4711Yes
31Prdx615607-0.238-0.4677Yes
32Txnrd215609-0.239-0.4480Yes
33Hhex15787-0.247-0.4368Yes
34Fes16097-0.267-0.4309Yes
35Prdx116389-0.286-0.4224Yes
36Lsp116650-0.303-0.4108Yes
37Mgst117441-0.362-0.4220Yes
38Glrx217769-0.395-0.4063Yes
39Ndufa618230-0.450-0.3931Yes
40Sod218288-0.457-0.3583Yes
41Egln218377-0.469-0.3241Yes
42Cdkn2d18501-0.492-0.2899Yes
43Junb18583-0.508-0.2522Yes
44Lamtor518589-0.509-0.2104Yes
45Sod119073-0.656-0.1813Yes
46Prdx219171-0.716-0.1273Yes
47Gpx319226-0.781-0.0656Yes
48Atox119263-0.8450.0023Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY