DatasetMEP.MEP.mega_Pheno.cls
#Group6_versus_Group8.MEP.mega_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeMEP.mega_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.49138972
Normalized Enrichment Score (NES)-1.6397301
Nominal p-value0.07053942
FDR q-value0.3216613
FWER p-Value0.176
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Atp1b11910.7400.0064No
2Atp6v1c18400.516-0.0161No
3Mrps1110720.473-0.0178No
4Echs120420.363-0.0604No
5Atp6v0e22760.344-0.0650No
6Fxn24630.329-0.0675No
7Cyb5r327430.305-0.0753No
8Cox1029110.292-0.0776No
9Ogdh31070.279-0.0816No
10Cox1531270.278-0.0765No
11Idh133180.267-0.0805No
12Bdh235750.255-0.0883No
13Hspa942290.217-0.1176No
14Atp6v1h49720.186-0.1523No
15Polr2f50000.184-0.1497No
16Opa151060.179-0.1512No
17Ndufa551820.176-0.1512No
18Got256280.156-0.1710No
19Lrpprc60840.138-0.1918No
20Aldh6a161060.137-0.1899No
21Afg3l263280.127-0.1986No
22Immt63770.125-0.1984No
23Rhot265250.118-0.2034No
24Hsd17b1065270.118-0.2009No
25Eci165440.118-0.1991No
26Etfdh68770.105-0.2142No
27Atp6v0c70670.098-0.2219No
28Slc25a1271270.096-0.2228No
29Pmpca71360.096-0.2211No
30Retsat73470.088-0.2301No
31Acaa1a73520.088-0.2284No
32Cyc178080.070-0.2506No
33Tcirg179910.063-0.2588No
34Ndufb284580.044-0.2821No
35Hadha84760.044-0.2821No
36Timm5085940.040-0.2873No
37Supv3l186790.036-0.2909No
38Dlst90890.022-0.3118No
39Tomm70a94200.010-0.3288No
40Idh3g96800.001-0.3423No
41Acadsb96970.001-0.3432No
42Timm1010019-0.004-0.3599No
43Bax10027-0.004-0.3601No
44Idh3a10099-0.007-0.3637No
45Mgst310172-0.009-0.3673No
46Ndufv210223-0.011-0.3696No
47Uqcrh10427-0.019-0.3799No
48Por10617-0.025-0.3892No
49Sdhb10830-0.032-0.3995No
50Casp710849-0.033-0.3998No
51Pdha110943-0.037-0.4038No
52Uqcrc111007-0.039-0.4063No
53Ech111088-0.042-0.4095No
54Ndufs411248-0.047-0.4168No
55Mrps2211263-0.047-0.4165No
56Nqo211384-0.052-0.4216No
57Nnt11464-0.055-0.4245No
58Ndufs211488-0.056-0.4245No
59Mrpl3511532-0.057-0.4255No
60Mtrr11546-0.058-0.4249No
61Hccs11730-0.064-0.4330No
62Rhot111789-0.066-0.4346No
63Dlat11847-0.068-0.4361No
64Sucla211977-0.073-0.4412No
65Uqcrfs112030-0.075-0.4423No
66Aifm112091-0.077-0.4437No
67Ndufa712199-0.082-0.4475No
68Suclg112248-0.084-0.4481No
69Mtx212320-0.087-0.4499No
70Slc25a2012349-0.088-0.4494No
71Vdac112352-0.089-0.4476No
72Pdhb12419-0.091-0.4490No
73Ndufs612493-0.094-0.4508No
74Acadm12535-0.096-0.4508No
75Oxa1l12599-0.099-0.4519No
76Ndufa112811-0.108-0.4606No
77Abcb712852-0.110-0.4602No
78Cox1112928-0.113-0.4616No
79Mrps3013023-0.117-0.4640No
80Gpi113146-0.122-0.4677No
81Ndufs713387-0.133-0.4773No
82Ndufa413548-0.140-0.4826No
83Cs13718-0.148-0.4881Yes
84Etfa13768-0.151-0.4873Yes
85Cox7a213834-0.153-0.4874Yes
86Decr113838-0.154-0.4841Yes
87Gpx413874-0.155-0.4825Yes
88Pdhx13962-0.160-0.4836Yes
89Ndufs113986-0.161-0.4812Yes
90Pdp113994-0.161-0.4780Yes
91Phb214003-0.162-0.4749Yes
92Sdha14130-0.167-0.4778Yes
93Sdhc14134-0.167-0.4742Yes
94Hadhb14169-0.169-0.4723Yes
95Ldha14246-0.172-0.4725Yes
96Cox7c14278-0.174-0.4703Yes
97Mfn214351-0.177-0.4701Yes
98Idh214491-0.183-0.4733Yes
99Dld14621-0.188-0.4759Yes
100Vdac314635-0.189-0.4724Yes
101Uqcrq14850-0.201-0.4792Yes
102Vdac214893-0.203-0.4769Yes
103Ndufa215013-0.210-0.4785Yes
104Cox1715028-0.210-0.4746Yes
105Glud115102-0.214-0.4737Yes
106Cyb5a15118-0.215-0.4697Yes
107Ndufa915328-0.226-0.4756Yes
108Phyh15512-0.233-0.4801Yes
109Ndufb615537-0.234-0.4762Yes
110Ndufb515556-0.235-0.4719Yes
111Mdh115606-0.238-0.4692Yes
112Ndufb715648-0.241-0.4660Yes
113Ldhb15665-0.243-0.4615Yes
114Atp6v1d15722-0.246-0.4590Yes
115Aco215947-0.257-0.4651Yes
116Grpel116101-0.267-0.4672Yes
117Idh3b16183-0.272-0.4654Yes
118Cpt1a16205-0.274-0.4605Yes
119Cox6c16363-0.284-0.4624Yes
120Atp6v1f16370-0.284-0.4564Yes
121Uqcrc216390-0.286-0.4511Yes
122Mrpl1516392-0.286-0.4448Yes
123Ndufs316432-0.289-0.4405Yes
124Ndufa816494-0.293-0.4372Yes
125Timm916540-0.296-0.4330Yes
126Atp6ap116613-0.301-0.4302Yes
127Mrpl3416819-0.313-0.4340Yes
128Acaa216918-0.320-0.4321Yes
129Uqcr1016923-0.321-0.4252Yes
130Timm17a16927-0.321-0.4183Yes
131Pdk416933-0.321-0.4114Yes
132Acat117190-0.340-0.4173Yes
133Mrps1517292-0.349-0.4149Yes
134Slc25a1117321-0.351-0.4086Yes
135Timm8b17331-0.353-0.4013Yes
136Fdx117489-0.367-0.4014Yes
137Slc25a317499-0.367-0.3938Yes
138Htra217530-0.370-0.3872Yes
139Alas117631-0.380-0.3840Yes
140Ndufv117730-0.390-0.3805Yes
141Atp6v1e117795-0.399-0.3751Yes
142Acadvl17798-0.399-0.3664Yes
143Atp6v1g117819-0.402-0.3585Yes
144Mdh217903-0.412-0.3538Yes
145Slc25a417994-0.423-0.3491Yes
146Iscu18011-0.426-0.3406Yes
147Atp5pb18029-0.428-0.3320Yes
148Mpc118145-0.439-0.3283Yes
149Uqcr1118166-0.443-0.3196Yes
150Ndufb318194-0.447-0.3111Yes
151Ndufa618230-0.450-0.3030Yes
152Fh118268-0.453-0.2949Yes
153Cox6b118279-0.456-0.2854Yes
154Timm1318297-0.458-0.2762Yes
155Slc25a518305-0.459-0.2664Yes
156Bckdha18315-0.459-0.2568Yes
157Ndufs818337-0.462-0.2476Yes
158Oat18346-0.464-0.2378Yes
159Uqcrb18357-0.466-0.2281Yes
160Cox7a2l18419-0.476-0.2207Yes
161Ndufc218474-0.487-0.2128Yes
162Mrpl1118481-0.489-0.2023Yes
163Atp6v0b18486-0.490-0.1917Yes
164Ndufab118559-0.503-0.1844Yes
165Ndufb818650-0.520-0.1776Yes
166Cox6a118705-0.531-0.1687Yes
167Sdhd18785-0.549-0.1607Yes
168Ndufc118793-0.553-0.1489Yes
169Cox7b18807-0.557-0.1372Yes
170Etfb18841-0.565-0.1265Yes
171Prdx318853-0.568-0.1145Yes
172Cox8a18919-0.589-0.1049Yes
173Ndufa319034-0.634-0.0969Yes
174Cox4i119057-0.648-0.0837Yes
175Mrps1219058-0.648-0.0694Yes
176Surf119071-0.655-0.0556Yes
177Cox5a19103-0.674-0.0423Yes
178Mtrf119188-0.736-0.0305Yes
179Cox5b19251-0.817-0.0157Yes
180Tomm2219262-0.8410.0024Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION