DatasetMEP.MEP.mega_Pheno.cls
#Group6_versus_Group8.MEP.mega_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeMEP.mega_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.31380197
Normalized Enrichment Score (NES)-1.2982403
Nominal p-value0.14
FDR q-value0.3013969
FWER p-Value0.793
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Auts2900.8340.0170No
2Cmklr13760.6330.0186No
3St8sia44470.6070.0307No
4Pim18420.5160.0236No
5Arid5b8750.5090.0351No
6Ccl511360.4620.0336No
7Helz212550.4420.0389No
8Ciita18970.3790.0153No
9Parp1419230.3770.0238No
10St3gal520390.3630.0272No
11Fcgr120440.3630.0365No
12Oas320660.3620.0448No
13Casp120820.3600.0534No
14Il15ra23780.3350.0467No
15Wars126130.3170.0427No
16Cdkn1a29430.2900.0331No
17Il1530460.2830.0351No
18Cd7431780.2740.0354No
19Vcam132500.2720.0387No
20Cd8636710.2490.0233No
21Ifit236730.2480.0297No
22Selp37610.2450.0315No
23Tdrd737810.2440.0369No
24Isg1538010.2430.0422No
25Ncoa338330.2410.0469No
26Rnf21340970.2240.0390No
27Lcp244020.2100.0286No
28Pml45790.2040.0247No
29Batf247190.2000.0226No
30H2-Aa47790.1960.0246No
31Slc25a2848060.1950.0283No
32Gch148260.1940.0324No
33Pnp54600.1640.0036No
34Ube2l655930.1580.0008No
35Hif1a57660.150-0.0043No
36Trim2165590.117-0.0426No
37Pfkp70100.101-0.0635No
38Usp1870120.101-0.0609No
39Pnpt173010.089-0.0737No
40Nup9373410.088-0.0734No
41Lysmd275650.080-0.0830No
42Ogfr76610.076-0.0860No
43Sri76790.075-0.0849No
44Bst277300.073-0.0856No
45Txnip77510.072-0.0848No
46Rnf3178090.070-0.0859No
47Cd6979200.066-0.0899No
48Rbck179420.065-0.0894No
49Rsad280020.063-0.0908No
50Trim2680140.062-0.0898No
51Herc683800.048-0.1076No
52Il4ra84280.046-0.1089No
53Il10ra84870.044-0.1108No
54Eif2ak286210.038-0.1167No
55Adar86750.037-0.1185No
56Peli188790.029-0.1284No
57Bank190130.025-0.1347No
58Rigi91230.021-0.1398No
59Jak291650.019-0.1415No
60Casp393100.014-0.1486No
61Psma394300.010-0.1546No
62Ifi2795370.006-0.1600No
63Cmpk296460.002-0.1656No
64Tnfsf1096490.002-0.1656No
65Stat210100-0.007-0.1889No
66Cxcl1010138-0.008-0.1907No
67Irf210178-0.009-0.1925No
68Ptpn210361-0.016-0.2016No
69Zbp110387-0.017-0.2024No
70Icam110448-0.019-0.2051No
71Nod110492-0.021-0.2068No
72Casp710849-0.033-0.2245No
73Oasl110919-0.036-0.2272No
74Nampt10976-0.038-0.2291No
75Znfx110991-0.038-0.2289No
76Epsti111000-0.038-0.2283No
77Trim1411139-0.044-0.2343No
78Parp1211338-0.050-0.2434No
79Rapgef611370-0.052-0.2437No
80Casp811683-0.062-0.2583No
81Ly6e11961-0.072-0.2709No
82Ifih111963-0.072-0.2691No
83Marchf111999-0.073-0.2690No
84Vamp512140-0.080-0.2743No
85Tor1b12172-0.081-0.2738No
86Stat312201-0.082-0.2731No
87Casp412219-0.083-0.2719No
88Tapbp12579-0.098-0.2881No
89Trim2512628-0.100-0.2880No
90Psmb1012719-0.104-0.2900No
91Nfkb112720-0.104-0.2873No
92Nlrc512745-0.105-0.2858No
93Stat412822-0.108-0.2869No
94Upp112830-0.109-0.2845No
95Samhd112914-0.112-0.2859No
96Mthfd213078-0.120-0.2913No
97Gpr1813116-0.122-0.2900No
98Itgb713210-0.124-0.2917No
99Isoc113309-0.129-0.2934No
100Ifi4413365-0.132-0.2929No
101Samd9l13415-0.134-0.2920No
102Cmtr113420-0.134-0.2887No
103Nfkbia13516-0.138-0.2900No
104Ptpn613621-0.143-0.2917No
105Irf813626-0.144-0.2882No
106Ddx6013865-0.155-0.2966No
107Ifit314119-0.167-0.3055No
108Lats214263-0.173-0.3085No
109Psme214307-0.175-0.3062No
110Ifnar214454-0.181-0.3091Yes
111Dhx5814488-0.182-0.3061Yes
112Pla2g4a14526-0.184-0.3032Yes
113Rtp414548-0.185-0.2995Yes
114Xaf114651-0.190-0.2999Yes
115Stat114658-0.191-0.2952Yes
116Myd8814697-0.193-0.2922Yes
117Irf514700-0.193-0.2873Yes
118P2ry1414753-0.196-0.2849Yes
119Ifi3014901-0.203-0.2873Yes
120Eif4e314923-0.205-0.2831Yes
121Ifitm214931-0.205-0.2781Yes
122Ripk114970-0.207-0.2747Yes
123Lap315031-0.211-0.2723Yes
124Btg115135-0.216-0.2721Yes
125Ptpn115579-0.236-0.2891Yes
126Irf715644-0.241-0.2862Yes
127Ifi3515680-0.243-0.2817Yes
128Pde4b15930-0.256-0.2880Yes
129Socs116201-0.273-0.2950Yes
130Sp11016251-0.276-0.2904Yes
131Fas16265-0.277-0.2839Yes
132Cd3816285-0.278-0.2777Yes
133Il716478-0.292-0.2801Yes
134Vamp816501-0.294-0.2736Yes
135Sspn16647-0.303-0.2733Yes
136Mvp16737-0.307-0.2699Yes
137Tap116806-0.312-0.2654Yes
138Cd27416934-0.321-0.2637Yes
139Isg2016961-0.323-0.2566Yes
140Arl4a16973-0.324-0.2487Yes
141Trafd117015-0.326-0.2424Yes
142Cfb17083-0.331-0.2373Yes
143Bpgm17208-0.341-0.2349Yes
144Tnfaip217219-0.342-0.2265Yes
145Lgals3bp17248-0.345-0.2190Yes
146Ripk217413-0.359-0.2182Yes
147Fgl217452-0.363-0.2108Yes
148Plscr117524-0.370-0.2049Yes
149Sppl2a17544-0.371-0.1962Yes
150Psmb217707-0.387-0.1946Yes
151Psma217826-0.403-0.1903Yes
152Psmb917827-0.403-0.1798Yes
153Psme117855-0.406-0.1706Yes
154Mx218039-0.431-0.1690Yes
155Oas218082-0.435-0.1599Yes
156Cd4018254-0.452-0.1570Yes
157Sod218288-0.457-0.1468Yes
158Socs318441-0.479-0.1423Yes
159H2-DMa18623-0.517-0.1383Yes
160B2m18822-0.560-0.1341Yes
161Irf118893-0.581-0.1226Yes
162Tnfaip318920-0.590-0.1087Yes
163Gbp318996-0.617-0.0965Yes
164Irf919077-0.658-0.0836Yes
165Nmi19087-0.662-0.0668Yes
166Ifitm319101-0.669-0.0501Yes
167Il619192-0.741-0.0355Yes
168Psmb819223-0.779-0.0168Yes
169Il18bp19247-0.8130.0031Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE