Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group6_versus_Group8.MEP.mega_Pheno.cls #Group6_versus_Group8_repos
Phenotype	MEP.mega_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.3350065
Normalized Enrichment Score (NES)	-1.502459
Nominal p-value	0.02079002
FDR q-value	0.21640146
FWER p-Value	0.369

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Nme3	230	0.712	0.0128	No
2	Ddb2	925	0.500	-0.0060	No
3	Pde6g	1751	0.388	-0.0355	No
4	Sdcbp	2001	0.368	-0.0357	No
5	Aaas	2748	0.304	-0.0640	No
6	Pold3	3052	0.282	-0.0700	No
7	Smad5	3468	0.260	-0.0826	No
8	Gmpr2	3546	0.257	-0.0776	No
9	Polh	3560	0.256	-0.0694	No
10	Polr2a	3887	0.237	-0.0782	No
11	Stx3	3994	0.230	-0.0757	No
12	Snapc4	4054	0.227	-0.0709	No
13	Pola2	4209	0.218	-0.0713	No
14	Clp1	4722	0.200	-0.0911	No
15	Polr2f	5000	0.184	-0.0991	No
16	Rpa2	5167	0.177	-0.1016	No
17	Nfx1	5178	0.177	-0.0960	No
18	Umps	5296	0.171	-0.0961	No
19	Mpg	5410	0.167	-0.0962	No
20	Pnp	5460	0.164	-0.0930	No
21	Rad51	5570	0.160	-0.0932	No
22	Pold1	5585	0.159	-0.0884	No
23	Dgcr8	5635	0.156	-0.0855	No
24	Npr2	5680	0.154	-0.0824	No
25	Rev3l	5740	0.152	-0.0802	No
26	Cstf3	5840	0.147	-0.0803	No
27	Supt5	5900	0.145	-0.0783	No
28	Rae1	5905	0.145	-0.0735	No
29	Snapc5	6268	0.130	-0.0878	No
30	Tk2	6418	0.123	-0.0913	No
31	Cant1	6585	0.116	-0.0959	No
32	Itpa	6655	0.114	-0.0956	No
33	Ddb1	6667	0.114	-0.0922	No
34	Ercc2	6767	0.109	-0.0935	No
35	Trp53	6896	0.105	-0.0966	No
36	Hcls1	7013	0.100	-0.0991	No
37	Srsf6	7346	0.088	-0.1134	No
38	Upf3b	8075	0.059	-0.1493	No
39	Ercc8	8246	0.052	-0.1563	No
40	Rfc4	8267	0.052	-0.1556	No
41	Vps37b	8323	0.050	-0.1567	No
42	Polb	8893	0.029	-0.1854	No
43	Polr2k	9018	0.025	-0.1910	No
44	Ak3	9023	0.025	-0.1904	No
45	Zfp707	9141	0.020	-0.1958	No
46	Mrpl40	9265	0.015	-0.2017	No
47	Polr1d	9301	0.014	-0.2030	No
48	Polr3gl	9359	0.012	-0.2056	No
49	Nelfe	9418	0.010	-0.2082	No
50	Rala	9488	0.008	-0.2116	No
51	Aprt	9510	0.007	-0.2124	No
52	Adcy6	9515	0.007	-0.2124	No
53	Cmpk2	9646	0.002	-0.2191	No
54	Tarbp2	10055	-0.005	-0.2402	No
55	Gtf2h1	10058	-0.005	-0.2401	No
56	Pold4	10306	-0.014	-0.2525	No
57	Usp11	10500	-0.021	-0.2619	No
58	Cetn2	10514	-0.022	-0.2618	No
59	Ncbp2	10535	-0.023	-0.2620	No
60	Gtf2b	10856	-0.033	-0.2776	No
61	Ercc5	10907	-0.036	-0.2789	No
62	Nt5c	11027	-0.040	-0.2838	No
63	Ell	11216	-0.046	-0.2920	No
64	Nt5c3	11378	-0.052	-0.2986	No
65	Pola1	11402	-0.053	-0.2979	No
66	Ercc1	11452	-0.055	-0.2986	No
67	Sf3a3	11466	-0.055	-0.2973	No
68	Gtf2a2	11554	-0.058	-0.2999	No
69	Lig1	11654	-0.061	-0.3029	No
70	Taf9	12021	-0.075	-0.3194	No
71	Guk1	12027	-0.075	-0.3171	No
72	Impdh2	12081	-0.077	-0.3171	No
73	Sac3d1	12238	-0.084	-0.3224	No
74	Pcna	12385	-0.090	-0.3269	No
75	Rfc3	12445	-0.092	-0.3267	No
76	Zwint	12461	-0.093	-0.3243	No
77	Rrm2b	12514	-0.095	-0.3237	No
78	Bcap31	12619	-0.100	-0.3256	No
79	Gtf2f1	12637	-0.101	-0.3230	No
80	Pom121	12868	-0.111	-0.3312	Yes
81	Sec61a1	12892	-0.111	-0.3285	Yes
82	Alyref	12907	-0.112	-0.3253	Yes
83	Dad1	12915	-0.112	-0.3218	Yes
84	Eloa	13013	-0.117	-0.3228	Yes
85	Rad52	13156	-0.123	-0.3259	Yes
86	Ada	13163	-0.123	-0.3219	Yes
87	Rnmt	13328	-0.130	-0.3259	Yes
88	Ercc4	13382	-0.132	-0.3241	Yes
89	Mpc2	13459	-0.136	-0.3233	Yes
90	Prim1	13636	-0.144	-0.3275	Yes
91	Nudt21	13669	-0.146	-0.3241	Yes
92	Gsdme	13698	-0.147	-0.3204	Yes
93	Taf13	13735	-0.149	-0.3171	Yes
94	Gpx4	13874	-0.155	-0.3189	Yes
95	Taf12	14008	-0.162	-0.3202	Yes
96	Adrm1	14015	-0.162	-0.3148	Yes
97	Taf6	14062	-0.164	-0.3115	Yes
98	Brf2	14092	-0.166	-0.3073	Yes
99	Polr3c	14331	-0.176	-0.3136	Yes
100	Cda	14468	-0.181	-0.3143	Yes
101	Rfc5	14546	-0.185	-0.3119	Yes
102	Polr2c	14578	-0.187	-0.3070	Yes
103	Polr2i	14671	-0.192	-0.3051	Yes
104	Ercc3	14789	-0.197	-0.3044	Yes
105	Eif1b	14978	-0.208	-0.3069	Yes
106	Polr2e	14996	-0.209	-0.3006	Yes
107	Cox17	15028	-0.210	-0.2948	Yes
108	Taf10	15030	-0.211	-0.2875	Yes
109	Ak1	15423	-0.231	-0.2999	Yes
110	Nelfb	15706	-0.245	-0.3061	Yes
111	Tsg101	15815	-0.248	-0.3031	Yes
112	Dut	15835	-0.250	-0.2954	Yes
113	Polr1h	15913	-0.255	-0.2906	Yes
114	Gtf2h3	15929	-0.256	-0.2824	Yes
115	Pde4b	15930	-0.256	-0.2735	Yes
116	Taf1c	15969	-0.259	-0.2665	Yes
117	Nelfcd	16411	-0.288	-0.2795	Yes
118	Pole4	16426	-0.288	-0.2702	Yes
119	Gtf2h5	16530	-0.295	-0.2652	Yes
120	Rfc2	16611	-0.300	-0.2590	Yes
121	Xpc	16620	-0.301	-0.2489	Yes
122	Tyms	16805	-0.312	-0.2476	Yes
123	Ssrp1	16867	-0.317	-0.2398	Yes
124	Gtf3c5	17258	-0.346	-0.2481	Yes
125	Polr2g	17378	-0.356	-0.2419	Yes
126	Polr2d	17504	-0.368	-0.2356	Yes
127	Polr1c	17577	-0.375	-0.2263	Yes
128	Nudt9	17618	-0.378	-0.2152	Yes
129	Arl6ip1	18069	-0.435	-0.2235	Yes
130	Dctn4	18374	-0.469	-0.2231	Yes
131	Vps28	18442	-0.479	-0.2099	Yes
132	Ago4	18470	-0.486	-0.1943	Yes
133	Supt4a	18500	-0.492	-0.1787	Yes
134	Nme1	18566	-0.504	-0.1645	Yes
135	Nme4	18570	-0.506	-0.1471	Yes
136	Polr2j	18594	-0.511	-0.1305	Yes
137	Edf1	18638	-0.518	-0.1147	Yes
138	Rbx1	18752	-0.540	-0.1018	Yes
139	Fen1	18872	-0.576	-0.0879	Yes
140	Poll	18935	-0.596	-0.0704	Yes
141	Rpa3	18982	-0.612	-0.0515	Yes
142	Dguok	19049	-0.643	-0.0325	Yes
143	Surf1	19071	-0.655	-0.0108	Yes
144	Polr2h	19086	-0.662	0.0115	Yes