Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group6_versus_Group8.MEP.mega_Pheno.cls #Group6_versus_Group8_repos
Phenotype	MEP.mega_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	5
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.3212295
Normalized Enrichment Score (NES)	-1.475021
Nominal p-value	0.018442623
FDR q-value	0.17862073
FWER p-Value	0.436

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	F7	277	0.685	0.0031	No
2	Ltf	475	0.598	0.0081	No
3	Cd46	551	0.571	0.0188	No
4	F2	559	0.568	0.0329	No
5	Pim1	842	0.516	0.0314	No
6	Ccl5	1136	0.462	0.0279	No
7	Tfpi2	1153	0.458	0.0388	No
8	Phex	1630	0.395	0.0240	No
9	Serpinc1	1888	0.380	0.0203	No
10	Ctsl	1948	0.376	0.0269	No
11	Kynu	2000	0.369	0.0337	No
12	Ctss	2075	0.361	0.0390	No
13	Casp1	2082	0.360	0.0479	No
14	Xpnpep1	2094	0.359	0.0566	No
15	Hspa1a	2163	0.354	0.0621	No
16	Cblb	2411	0.332	0.0577	No
17	Dock10	2837	0.298	0.0431	No
18	Lipa	3270	0.271	0.0274	No
19	Fcnb	3437	0.260	0.0254	No
20	Zfpm2	3621	0.252	0.0223	No
21	Me1	3630	0.251	0.0283	No
22	C2	3667	0.249	0.0328	No
23	Ctso	3767	0.245	0.0339	No
24	Adam9	3821	0.242	0.0373	No
25	Dgkh	3882	0.237	0.0403	No
26	Lcp2	4402	0.210	0.0186	No
27	Pcsk9	4468	0.208	0.0205	No
28	Klkb1	4716	0.200	0.0127	No
29	Sh2b3	5060	0.182	-0.0006	No
30	Cpm	5329	0.170	-0.0102	No
31	Col4a2	5341	0.170	-0.0065	No
32	Clu	5364	0.169	-0.0033	No
33	Rbsn	5421	0.166	-0.0020	No
34	Usp15	5797	0.149	-0.0177	No
35	Raf1	6049	0.139	-0.0273	No
36	F5	6104	0.137	-0.0266	No
37	Src	6127	0.136	-0.0243	No
38	Hnf4a	6190	0.133	-0.0241	No
39	Pla2g7	6205	0.132	-0.0215	No
40	Gca	6361	0.126	-0.0263	No
41	Vcpip1	6620	0.115	-0.0369	No
42	Rasgrp1	6664	0.114	-0.0362	No
43	Lck	6738	0.111	-0.0372	No
44	Zeb1	6776	0.109	-0.0363	No
45	Actn2	6791	0.108	-0.0343	No
46	Pik3ca	6955	0.102	-0.0402	No
47	Grb2	7072	0.098	-0.0438	No
48	Usp14	7249	0.091	-0.0506	No
49	C3	7333	0.089	-0.0527	No
50	Pik3r5	7386	0.087	-0.0532	No
51	Prep	7709	0.074	-0.0681	No
52	Ctsh	7839	0.069	-0.0731	No
53	Kif2a	7903	0.067	-0.0746	No
54	Lgals3	8153	0.057	-0.0862	No
55	Cebpb	8342	0.049	-0.0948	No
56	Dgkg	8435	0.045	-0.0984	No
57	Lrp1	8689	0.036	-0.1107	No
58	Lyn	8856	0.030	-0.1186	No
59	Csrp1	8887	0.029	-0.1194	No
60	L3mbtl4	8932	0.027	-0.1210	No
61	Jak2	9165	0.019	-0.1327	No
62	Casp3	9310	0.014	-0.1398	No
63	Cdk5r1	9580	0.004	-0.1538	No
64	Gpd2	9589	0.004	-0.1541	No
65	Ctsd	10001	-0.003	-0.1755	No
66	Rabif	10006	-0.003	-0.1756	No
67	Gmfb	10044	-0.004	-0.1774	No
68	Psen1	10161	-0.008	-0.1833	No
69	Irf2	10178	-0.009	-0.1839	No
70	Pdgfb	10195	-0.010	-0.1845	No
71	Cpq	10444	-0.019	-0.1969	No
72	Timp2	10585	-0.024	-0.2036	No
73	Sirt6	10638	-0.026	-0.2057	No
74	Fyn	10746	-0.030	-0.2105	No
75	Casp7	10849	-0.033	-0.2150	No
76	Usp8	10871	-0.034	-0.2152	No
77	Serpinb2	10932	-0.036	-0.2174	No
78	Dock4	10934	-0.036	-0.2165	No
79	F8	11230	-0.046	-0.2307	No
80	Akap10	11278	-0.048	-0.2320	No
81	Rce1	11467	-0.055	-0.2404	No
82	Tmprss6	11600	-0.059	-0.2458	No
83	Gnai3	11659	-0.061	-0.2472	No
84	Ppp2cb	11714	-0.063	-0.2484	No
85	Olr1	12011	-0.074	-0.2620	No
86	Cr2	12144	-0.080	-0.2668	No
87	Casp4	12219	-0.083	-0.2686	No
88	Maff	12495	-0.095	-0.2805	No
89	Plek	12504	-0.095	-0.2785	No
90	Usp16	12684	-0.103	-0.2852	No
91	Spock2	12721	-0.104	-0.2844	No
92	Prkcd	12876	-0.111	-0.2897	No
93	Dock9	12885	-0.111	-0.2872	No
94	Gp1ba	12952	-0.114	-0.2878	No
95	Cdh13	12960	-0.114	-0.2852	No
96	Stx4a	13018	-0.117	-0.2852	No
97	Dusp6	13094	-0.121	-0.2860	No
98	Anxa5	13522	-0.139	-0.3048	No
99	Pik3cg	13688	-0.147	-0.3096	No
100	Rhog	13737	-0.149	-0.3083	No
101	Brpf3	13857	-0.154	-0.3106	No
102	Cp	13916	-0.158	-0.3096	No
103	Pdp1	13994	-0.161	-0.3095	No
104	Ctsc	14032	-0.163	-0.3072	No
105	Rnf4	14097	-0.166	-0.3063	No
106	Hspa5	14319	-0.175	-0.3134	No
107	Lta4h	14354	-0.177	-0.3106	No
108	C1qc	14446	-0.180	-0.3108	No
109	Cda	14468	-0.181	-0.3072	No
110	Pla2g4a	14526	-0.184	-0.3055	No
111	Car2	14624	-0.189	-0.3057	No
112	Gnb4	14673	-0.192	-0.3033	No
113	Prcp	14808	-0.198	-0.3053	No
114	Pfn1	14956	-0.206	-0.3077	No
115	Was	14964	-0.207	-0.3027	No
116	Lap3	15031	-0.211	-0.3008	No
117	Lamp2	15082	-0.213	-0.2979	No
118	Mmp14	15095	-0.214	-0.2931	No
119	Gng2	15286	-0.224	-0.2973	No
120	Kcnip2	15405	-0.230	-0.2975	No
121	Msrb1	15617	-0.239	-0.3024	No
122	Irf7	15644	-0.241	-0.2976	No
123	Kcnip3	15652	-0.241	-0.2918	No
124	Dpp4	15915	-0.255	-0.2990	No
125	Dusp5	16039	-0.264	-0.2987	No
126	Plg	16472	-0.291	-0.3138	Yes
127	Fcer1g	16496	-0.293	-0.3075	Yes
128	Gzmb	16545	-0.296	-0.3024	Yes
129	Gnai2	16599	-0.299	-0.2975	Yes
130	Gata3	16966	-0.324	-0.3083	Yes
131	Gzmk	16987	-0.325	-0.3011	Yes
132	Prdm4	17047	-0.328	-0.2957	Yes
133	Cfb	17083	-0.331	-0.2891	Yes
134	Gp9	17327	-0.352	-0.2928	Yes
135	F10	17370	-0.356	-0.2859	Yes
136	Calm3	17446	-0.362	-0.2805	Yes
137	Casp9	17459	-0.364	-0.2719	Yes
138	Fdx1	17489	-0.367	-0.2640	Yes
139	Ctsb	17522	-0.369	-0.2562	Yes
140	Plscr1	17524	-0.370	-0.2468	Yes
141	Pclo	17657	-0.382	-0.2439	Yes
142	Notch4	17719	-0.389	-0.2371	Yes
143	Dyrk2	17768	-0.395	-0.2295	Yes
144	Psmb9	17827	-0.403	-0.2223	Yes
145	Itgam	17830	-0.403	-0.2121	Yes
146	Ppp4c	17874	-0.408	-0.2039	Yes
147	Ehd1	18053	-0.432	-0.2021	Yes
148	Calm1	18272	-0.454	-0.2019	Yes
149	S100a9	18722	-0.534	-0.2116	Yes
150	Gngt2	18777	-0.547	-0.2005	Yes
151	Cd36	18795	-0.554	-0.1872	Yes
152	Fn1	18850	-0.567	-0.1755	Yes
153	Irf1	18893	-0.581	-0.1628	Yes
154	Tnfaip3	18920	-0.590	-0.1491	Yes
155	Lgmn	19022	-0.628	-0.1383	Yes
156	Gnb2	19100	-0.668	-0.1252	Yes
157	S100a13	19172	-0.720	-0.1105	Yes
158	Prss36	19189	-0.737	-0.0925	Yes
159	Il6	19192	-0.741	-0.0736	Yes
160	Atox1	19263	-0.845	-0.0557	Yes
161	Mmp15	19295	-1.020	-0.0312	Yes
162	Plaur	19305	-1.241	0.0001	Yes