DatasetMEP.MEP.mega_Pheno.cls
#Group3_versus_Group4.MEP.mega_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_PI3K_AKT_MTOR_SIGNALING
Enrichment Score (ES)0.18849362
Normalized Enrichment Score (NES)0.85164136
Nominal p-value0.64615387
FDR q-value1.0
FWER p-Value0.999
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Trib32250.7410.0350Yes
2Prkar2a7960.5300.0387Yes
3Prkcb12260.4530.0449Yes
4Sfn22790.3420.0117Yes
5Traf223530.3360.0291Yes
6Cdk124560.3290.0445Yes
7Il2rg26580.3130.0538Yes
8Il427600.3050.0677Yes
9Camk427770.3040.0860Yes
10Gna1431610.2740.0834Yes
11Fgf1737830.2430.0663Yes
12Akt140660.2290.0660Yes
13Eif4e41000.2270.0786Yes
14Arf141630.2230.0894Yes
15Cdkn1a41960.2200.1016Yes
16Prkag142250.2180.1139Yes
17Mapkap142610.2170.1257Yes
18Actr344470.2080.1292Yes
19Mknk244590.2080.1417Yes
20Grb246790.1950.1426Yes
21Pikfyve48920.1820.1431Yes
22Actr249600.1790.1508Yes
23Tsc251400.1680.1521Yes
24Plcg151930.1650.1598Yes
25Stat252060.1650.1695Yes
26Hsp90b152170.1640.1793Yes
27Nfkbib53050.1590.1848Yes
28Mapk954380.1530.1876Yes
29Ppp2r1b55980.1460.1885Yes
30Ywhab57930.1370.1870No
31Ube2n64310.1110.1608No
32Ddit364560.1100.1665No
33Smad265010.1080.1710No
34Calr66340.1030.1706No
35Cab3966620.1020.1756No
36Map2k366760.1010.1813No
37Atf167580.0980.1833No
38Rps6ka369680.0890.1780No
39Plcb172800.0780.1667No
40Pik3r373000.0770.1706No
41Irak473130.0770.1748No
42Ecsit76000.0670.1641No
43Vav376220.0650.1671No
44Pin177540.0590.1640No
45Rptor78520.0560.1625No
46Nod179050.0540.1632No
47Ube2d379470.0530.1644No
48Cxcr482200.0420.1529No
49Acaca82550.0410.1537No
50Sla82950.0400.1542No
51Prkaa285900.0290.1407No
52Nck186610.0270.1388No
53Cab39l89900.0170.1228No
54Sqstm191150.0120.1171No
55Mknk192970.0060.1080No
56Slc2a19669-0.0020.0888No
57Pdk19790-0.0060.0829No
58Csnk2b9861-0.0080.0798No
59Cltc9952-0.0110.0758No
60Arhgdia10028-0.0130.0727No
61Myd8810034-0.0140.0733No
62Mapk110123-0.0170.0698No
63Cdk410426-0.0280.0558No
64Ripk110453-0.0290.0562No
65Ralb11179-0.0540.0219No
66Mapk811248-0.0570.0220No
67Raf111449-0.0650.0156No
68Lck11767-0.0760.0039No
69E2f111889-0.0810.0027No
70Ap2m112225-0.092-0.0089No
71Tbk112329-0.097-0.0082No
72Pten12419-0.100-0.0065No
73Pitx212608-0.107-0.0095No
74Pfn112751-0.113-0.0098No
75Rit112830-0.115-0.0066No
76Pak413010-0.122-0.0082No
77Gsk3b13111-0.126-0.0055No
78Cdk213145-0.1270.0007No
79Hras13159-0.1270.0080No
80Map3k713227-0.1300.0127No
81Ptpn1113304-0.1330.0171No
82Cfl113379-0.1360.0219No
83Mapk1013466-0.1400.0262No
84Map2k613590-0.1450.0289No
85Rps6ka113691-0.1480.0331No
86Tiam114165-0.1700.0192No
87Dusp314569-0.1890.0101No
88Cdkn1b14634-0.1920.0189No
89Adcy214979-0.2060.0140No
90Tnfrsf1a15050-0.2090.0235No
91Ppp1ca15075-0.2100.0355No
92Pla2g12a15488-0.2310.0286No
93Arpc315681-0.2400.0337No
94Rac116116-0.2640.0277No
95Dapp116387-0.2790.0312No
96Akt1s117028-0.3180.0179No
97Grk217094-0.3220.0348No
98Itpr217320-0.3390.0444No
99Them419289-0.9360.0009No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PI3K_AKT_MTOR_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PI3K_AKT_MTOR_SIGNALING