Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group3_versus_Group4.MEP.mega_Pheno.cls #Group3_versus_Group4_repos
Phenotype	MEP.mega_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	-0.24704354
Normalized Enrichment Score (NES)	-0.8718409
Nominal p-value	0.68679243
FDR q-value	0.95707
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gja5	10	1.336	0.0408	No
2	Ablim1	82	0.895	0.0647	No
3	Fdps	430	0.632	0.0662	No
4	Bhlhe40	560	0.596	0.0779	No
5	Mapre3	896	0.507	0.0761	No
6	Pde4dip	1025	0.479	0.0842	No
7	Ephb3	1057	0.477	0.0973	No
8	Dmd	1315	0.446	0.0977	No
9	Erbb3	1323	0.445	0.1111	No
10	Igfbp7	1340	0.443	0.1240	No
11	Myl6b	1450	0.432	0.1317	No
12	Gpx3	1655	0.410	0.1337	No
13	App	1714	0.403	0.1431	No
14	Pcx	2001	0.373	0.1397	No
15	Myh11	2081	0.362	0.1468	No
16	Hbegf	2119	0.359	0.1560	No
17	Flii	2899	0.293	0.1244	No
18	Ncam1	2970	0.288	0.1297	No
19	Camk2b	2971	0.288	0.1386	No
20	Sparc	3051	0.282	0.1432	No
21	Ctf1	3185	0.273	0.1447	No
22	Dmpk	3214	0.271	0.1516	No
23	Dtna	3771	0.243	0.1301	No
24	Wwtr1	3958	0.235	0.1277	No
25	Cdkn1a	4196	0.220	0.1221	No
26	Ankrd2	4284	0.216	0.1242	No
27	Ppfia4	4573	0.200	0.1154	No
28	Ryr1	4596	0.199	0.1204	No
29	Large1	4672	0.196	0.1225	No
30	Sorbs1	4866	0.183	0.1181	No
31	Chrnb1	5058	0.172	0.1135	No
32	Tsc2	5140	0.168	0.1145	No
33	Prnp	5472	0.151	0.1019	No
34	Kifc3	5540	0.148	0.1030	No
35	Tpm3	5566	0.147	0.1062	No
36	Myom1	5795	0.136	0.0985	No
37	Foxo4	6196	0.120	0.0814	No
38	Pfkm	6324	0.115	0.0783	No
39	Agl	6390	0.113	0.0784	No
40	Nos1	6469	0.109	0.0777	No
41	Sh2b1	6509	0.108	0.0790	No
42	Schip1	6551	0.106	0.0802	No
43	Tnnc1	6719	0.099	0.0745	No
44	Itgb4	6808	0.097	0.0729	No
45	Mapk12	6928	0.091	0.0695	No
46	Mras	6950	0.090	0.0712	No
47	Tead4	6980	0.089	0.0724	No
48	Sgcd	7045	0.086	0.0717	No
49	Col1a1	7158	0.081	0.0684	No
50	Stc2	7248	0.079	0.0662	No
51	Bag1	7498	0.071	0.0554	No
52	Acsl1	7501	0.071	0.0575	No
53	Ocel1	7556	0.068	0.0568	No
54	Cox7a1	7761	0.059	0.0480	No
55	Hspb8	7764	0.059	0.0497	No
56	Aebp1	7782	0.058	0.0506	No
57	Nqo1	7876	0.055	0.0475	No
58	Mef2c	8003	0.050	0.0425	No
59	Gaa	8122	0.046	0.0377	No
60	Eno3	8187	0.044	0.0357	No
61	Tnnt1	8230	0.042	0.0348	No
62	Ptp4a3	8314	0.039	0.0317	No
63	Klf5	8715	0.025	0.0116	No
64	Hdac5	8722	0.025	0.0121	No
65	Gnao1	8805	0.022	0.0085	No
66	Crat	9003	0.016	-0.0013	No
67	Atp6ap1	9256	0.007	-0.0142	No
68	Ache	9460	0.000	-0.0248	No
69	Sspn	9487	0.000	-0.0262	No
70	Vipr1	9491	0.000	-0.0263	No
71	Fgf2	9750	-0.004	-0.0397	No
72	Rb1	9770	-0.005	-0.0405	No
73	Dapk2	9854	-0.008	-0.0446	No
74	Gabarapl2	9972	-0.012	-0.0503	No
75	Sh3bgr	10520	-0.030	-0.0779	No
76	Cnn3	10598	-0.033	-0.0809	No
77	Eif4a2	10868	-0.043	-0.0936	No
78	Gadd45b	11418	-0.063	-0.1203	No
79	Cdh13	11443	-0.064	-0.1196	No
80	Tagln	11940	-0.083	-0.1429	No
81	Sptan1	12236	-0.093	-0.1554	No
82	Akt2	12474	-0.102	-0.1646	No
83	Mybpc3	12650	-0.109	-0.1704	No
84	Sphk1	12772	-0.114	-0.1732	No
85	Svil	12822	-0.115	-0.1722	No
86	Rit1	12830	-0.115	-0.1690	No
87	Kcnh2	12886	-0.118	-0.1682	No
88	Csrp3	12938	-0.119	-0.1672	No
89	Pick1	13182	-0.128	-0.1759	No
90	Adcy9	13276	-0.132	-0.1767	No
91	Tpd52l1	13300	-0.133	-0.1738	No
92	Pygm	13680	-0.148	-0.1890	No
93	Ckmt2	13887	-0.157	-0.1949	No
94	Tgfb1	13896	-0.158	-0.1904	No
95	Syngr2	14346	-0.178	-0.2083	No
96	Cryab	14586	-0.190	-0.2149	No
97	Myo1c	14789	-0.200	-0.2193	No
98	Myh9	15074	-0.210	-0.2276	No
99	Itgb1	15393	-0.226	-0.2372	No
100	Mef2d	15397	-0.226	-0.2303	No
101	Notch1	15718	-0.242	-0.2396	Yes
102	Atp2a1	15816	-0.246	-0.2370	Yes
103	Nav2	15851	-0.249	-0.2311	Yes
104	Psen2	15852	-0.249	-0.2234	Yes
105	Gsn	16038	-0.258	-0.2251	Yes
106	Adam12	16147	-0.265	-0.2225	Yes
107	Fhl1	16195	-0.268	-0.2167	Yes
108	Mef2a	16212	-0.269	-0.2092	Yes
109	Mylk	16245	-0.271	-0.2025	Yes
110	Slc6a8	16356	-0.277	-0.1997	Yes
111	Reep1	16574	-0.289	-0.2020	Yes
112	Sorbs3	16594	-0.290	-0.1941	Yes
113	Lsp1	16646	-0.293	-0.1877	Yes
114	Agrn	16706	-0.297	-0.1816	Yes
115	Mylpf	16749	-0.300	-0.1745	Yes
116	Smtn	16814	-0.303	-0.1685	Yes
117	Myl4	16957	-0.314	-0.1661	Yes
118	Ldb3	17010	-0.317	-0.1590	Yes
119	Itgb5	17039	-0.319	-0.1506	Yes
120	Tnnt3	17111	-0.323	-0.1444	Yes
121	Plxnb2	17125	-0.324	-0.1350	Yes
122	Ifrd1	17346	-0.341	-0.1360	Yes
123	Kcnh1	17627	-0.364	-0.1393	Yes
124	Col4a2	17661	-0.367	-0.1297	Yes
125	Clu	17698	-0.371	-0.1201	Yes
126	Myom2	17746	-0.376	-0.1109	Yes
127	Tpm2	17815	-0.383	-0.1026	Yes
128	Lpin1	17833	-0.385	-0.0916	Yes
129	Bin1	18280	-0.430	-0.1015	Yes
130	Cd36	18433	-0.455	-0.0954	Yes
131	Ckb	18532	-0.468	-0.0860	Yes
132	Fkbp1b	18538	-0.469	-0.0718	Yes
133	Pkia	18583	-0.477	-0.0594	Yes
134	Actn2	18664	-0.492	-0.0483	Yes
135	Pdlim7	18731	-0.508	-0.0361	Yes
136	Lama2	18771	-0.520	-0.0220	Yes
137	Ak1	18787	-0.523	-0.0066	Yes
138	Igf1	18811	-0.530	0.0086	Yes
139	Sirt2	18905	-0.558	0.0210	Yes