DatasetMEP.MEP.mega_Pheno.cls
#Group3_versus_Group4.MEP.mega_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.34396842
Normalized Enrichment Score (NES)-1.213508
Nominal p-value0.25720164
FDR q-value1.0
FWER p-Value0.902
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Trim264950.617-0.0075No
2Il10ra9470.496-0.0162No
3Cfb16220.412-0.0392No
4Ripk216770.406-0.0299No
5Fcgr117420.400-0.0213No
6Irf823390.337-0.0424No
7Upp127410.307-0.0542No
8Ube2l627900.303-0.0477No
9Lats229450.290-0.0471No
10Ncoa329570.289-0.0391No
11St8sia430740.281-0.0367No
12Il4ra34340.258-0.0478No
13Lysmd241740.222-0.0798No
14Cdkn1a41960.220-0.0743No
15Arid5b42270.218-0.0694No
16Lap344960.205-0.0773No
17Marchf145930.199-0.0764No
18Tor1b46070.198-0.0712No
19Nup9349790.177-0.0853No
20Psmb952010.165-0.0919No
21Stat252060.165-0.0872No
22Gbp352120.164-0.0826No
23Epsti152870.160-0.0817No
24Rnf3153320.158-0.0792No
25H2-Aa54130.154-0.0788No
26Gpr1854580.152-0.0766No
27Adar56060.145-0.0800No
28Ciita58150.135-0.0868No
29Trim1458270.135-0.0833No
30Hif1a59150.131-0.0840No
31Irf259260.130-0.0806No
32Nfkbia60170.128-0.0815No
33Rapgef662100.120-0.0880No
34Pim163010.116-0.0892No
35Cd6963720.114-0.0895No
36Bpgm66250.103-0.0996No
37Irf166700.101-0.0988No
38Mthfd266820.101-0.0964No
39Il18bp68680.093-0.1033No
40Mvp71210.083-0.1140No
41Stat471240.083-0.1116No
42Psmb1071440.082-0.1102No
43Arl4a73250.076-0.1173No
44Gch175570.068-0.1273No
45Nfkb178320.057-0.1400No
46Casp178650.056-0.1400No
47Nod179050.054-0.1404No
48Fgl279830.051-0.1429No
49Socs180080.050-0.1427No
50Tnfaip280600.048-0.1439No
51Samhd182630.041-0.1532No
52Dhx5883580.037-0.1570No
53Stat184150.035-0.1589No
54Casp884580.034-0.1601No
55Wars187910.022-0.1768No
56Il689410.018-0.1840No
57Tapbp92670.007-0.2008No
58Nmi93170.005-0.2032No
59P2ry1493290.005-0.2036No
60Stat394270.001-0.2087No
61Sspn94870.000-0.2117No
62Ptpn29616-0.000-0.2184No
63Pml10022-0.013-0.2392No
64Myd8810034-0.014-0.2394No
65Irf710043-0.014-0.2394No
66Sri10085-0.015-0.2410No
67Parp1410157-0.018-0.2442No
68Helz210168-0.018-0.2442No
69Casp710252-0.022-0.2479No
70Itgb710270-0.022-0.2481No
71Ripk110453-0.029-0.2568No
72Vamp510584-0.032-0.2626No
73Plscr110635-0.035-0.2642No
74Pnpt110678-0.036-0.2653No
75Psmb210691-0.037-0.2648No
76Usp1810956-0.046-0.2773No
77Ifit210999-0.047-0.2780No
78Casp411002-0.048-0.2767No
79Trim2111098-0.051-0.2802No
80Zbp111173-0.054-0.2824No
81Il15ra11316-0.059-0.2881No
82Pnp11450-0.065-0.2931No
83Tdrd711478-0.065-0.2926No
84Bst211602-0.070-0.2969No
85Vcam111643-0.071-0.2969No
86Nampt11720-0.074-0.2986No
87Ly6e11992-0.083-0.3103No
88Cd7412083-0.087-0.3124No
89Ogfr12089-0.087-0.3101No
90Pde4b12129-0.088-0.3095No
91Auts212153-0.089-0.3080No
92Samd9l12229-0.092-0.3092No
93Psme212230-0.092-0.3064No
94Tnfsf1012265-0.094-0.3054No
95Tap112292-0.095-0.3039No
96Rbck112501-0.103-0.3117No
97Casp312526-0.104-0.3099No
98Slc25a2812557-0.105-0.3083No
99Btg112975-0.121-0.3265No
100Ptpn113137-0.126-0.3311No
101Mx213323-0.133-0.3368No
102Il1513461-0.140-0.3398Yes
103Ifnar213467-0.140-0.3359Yes
104Nlrc513506-0.142-0.3337Yes
105Ptpn613534-0.143-0.3308Yes
106Selp13632-0.146-0.3315Yes
107Psma313654-0.147-0.3282Yes
108Peli113687-0.148-0.3255Yes
109Isg2013694-0.149-0.3213Yes
110B2m13856-0.156-0.3251Yes
111H2-DMa13860-0.156-0.3206Yes
112Znfx113959-0.160-0.3210Yes
113Jak213966-0.161-0.3165Yes
114Cd4014088-0.167-0.3178Yes
115Cmtr114117-0.168-0.3142Yes
116Ifitm214186-0.171-0.3127Yes
117Cmklr114193-0.171-0.3079Yes
118Ifit314296-0.176-0.3080Yes
119Ifih114341-0.178-0.3050Yes
120Pla2g4a14525-0.186-0.3090Yes
121Vamp814529-0.187-0.3036Yes
122Parp1214882-0.205-0.3159Yes
123Cd27414893-0.206-0.3102Yes
124Isoc115368-0.225-0.3283Yes
125Psmb815445-0.229-0.3255Yes
126Eif2ak215499-0.231-0.3213Yes
127Ifi3515521-0.232-0.3155Yes
128Cd3815598-0.237-0.3124Yes
129St3gal515742-0.243-0.3126Yes
130Tnfaip315810-0.246-0.3088Yes
131Psme115874-0.251-0.3046Yes
132Il715895-0.252-0.2981Yes
133Cmpk215952-0.255-0.2935Yes
134Rigi15970-0.256-0.2867Yes
135Rnf21316568-0.289-0.3093Yes
136Fas16633-0.292-0.3039Yes
137Batf216635-0.292-0.2953Yes
138Trim2516669-0.294-0.2882Yes
139Sppl2a16800-0.303-0.2860Yes
140Socs316878-0.308-0.2808Yes
141Pfkp16941-0.313-0.2747Yes
142Psma216996-0.316-0.2681Yes
143Sod217049-0.319-0.2613Yes
144Ifi4417052-0.319-0.2519Yes
145Txnip17087-0.321-0.2441Yes
146Ifi2717096-0.322-0.2349Yes
147Herc617098-0.322-0.2253Yes
148Cxcl1017135-0.324-0.2176Yes
149Bank117326-0.339-0.2174Yes
150Ddx6017355-0.342-0.2086Yes
151Eif4e317532-0.358-0.2072Yes
152Cd8617556-0.360-0.1977Yes
153Ccl517704-0.372-0.1942Yes
154Xaf118273-0.429-0.2111Yes
155Lgals3bp18330-0.439-0.2010Yes
156Sp11018419-0.452-0.1921Yes
157Oas218432-0.455-0.1792Yes
158Icam118603-0.480-0.1737Yes
159Oasl118856-0.543-0.1707Yes
160Rsad218860-0.544-0.1546Yes
161Ifitm318914-0.560-0.1407Yes
162Oas318955-0.577-0.1256Yes
163Lcp218963-0.584-0.1085Yes
164Irf919033-0.613-0.0938Yes
165Trafd119053-0.624-0.0762Yes
166Irf519082-0.637-0.0587Yes
167Isg1519118-0.663-0.0408Yes
168Ifi3019249-0.818-0.0232Yes
169Rtp419271-0.8770.0019Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE