| Dataset | MEP.MEP.mega_Pheno.cls #Group3_versus_Group4.MEP.mega_Pheno.cls #Group3_versus_Group4_repos |
| Phenotype | MEP.mega_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | 0.20057167 |
| Normalized Enrichment Score (NES) | 0.9175471 |
| Nominal p-value | 0.6273292 |
| FDR q-value | 0.96199733 |
| FWER p-Value | 0.999 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Ccnd1 | 6 | 1.387 | 0.0461 | Yes |
| 2 | Rps6ka2 | 84 | 0.892 | 0.0719 | Yes |
| 3 | Xbp1 | 163 | 0.807 | 0.0948 | Yes |
| 4 | Homer2 | 168 | 0.803 | 0.1215 | Yes |
| 5 | Il17rb | 622 | 0.584 | 0.1174 | Yes |
| 6 | Plac1 | 1319 | 0.446 | 0.0959 | Yes |
| 7 | Fdft1 | 1347 | 0.442 | 0.1093 | Yes |
| 8 | Gper1 | 1420 | 0.437 | 0.1202 | Yes |
| 9 | Il6st | 1503 | 0.428 | 0.1302 | Yes |
| 10 | Scnn1a | 1543 | 0.423 | 0.1423 | Yes |
| 11 | Slc16a1 | 1581 | 0.419 | 0.1544 | Yes |
| 12 | Arl3 | 1651 | 0.410 | 0.1645 | Yes |
| 13 | Ugdh | 1653 | 0.410 | 0.1782 | Yes |
| 14 | Opn3 | 2022 | 0.370 | 0.1714 | Yes |
| 15 | Cdc20 | 2161 | 0.356 | 0.1760 | Yes |
| 16 | Sfn | 2279 | 0.342 | 0.1814 | Yes |
| 17 | Ass1 | 2403 | 0.333 | 0.1861 | Yes |
| 18 | Slc7a5 | 2486 | 0.326 | 0.1927 | Yes |
| 19 | Tmprss3 | 2544 | 0.322 | 0.2005 | Yes |
| 20 | Gfus | 3162 | 0.274 | 0.1775 | Yes |
| 21 | Mdk | 3189 | 0.273 | 0.1852 | Yes |
| 22 | Slc29a1 | 3381 | 0.262 | 0.1840 | Yes |
| 23 | Cacna2d2 | 3475 | 0.255 | 0.1877 | Yes |
| 24 | Siah2 | 3541 | 0.254 | 0.1928 | Yes |
| 25 | Aldh3a2 | 3889 | 0.239 | 0.1827 | Yes |
| 26 | Cdc6 | 3974 | 0.234 | 0.1861 | Yes |
| 27 | Flnb | 3976 | 0.234 | 0.1939 | Yes |
| 28 | Tfpi2 | 4247 | 0.217 | 0.1871 | Yes |
| 29 | Foxc1 | 4295 | 0.216 | 0.1918 | Yes |
| 30 | Large1 | 4672 | 0.196 | 0.1788 | Yes |
| 31 | Amfr | 4674 | 0.195 | 0.1852 | Yes |
| 32 | Gla | 4704 | 0.194 | 0.1902 | Yes |
| 33 | Kif20a | 4881 | 0.182 | 0.1871 | Yes |
| 34 | Rapgefl1 | 4883 | 0.182 | 0.1932 | Yes |
| 35 | Tjp3 | 4943 | 0.179 | 0.1961 | Yes |
| 36 | Atp2b4 | 4972 | 0.178 | 0.2006 | Yes |
| 37 | Scarb1 | 5318 | 0.159 | 0.1879 | No |
| 38 | Top2a | 5514 | 0.149 | 0.1827 | No |
| 39 | Sgk1 | 5556 | 0.148 | 0.1855 | No |
| 40 | Ptger3 | 5593 | 0.146 | 0.1885 | No |
| 41 | Tspan13 | 5844 | 0.134 | 0.1799 | No |
| 42 | Egr3 | 5961 | 0.129 | 0.1782 | No |
| 43 | Kcnk5 | 5991 | 0.129 | 0.1810 | No |
| 44 | Stil | 6148 | 0.122 | 0.1769 | No |
| 45 | Fkbp4 | 6158 | 0.122 | 0.1805 | No |
| 46 | Dlg5 | 6347 | 0.115 | 0.1746 | No |
| 47 | Btg3 | 6457 | 0.110 | 0.1725 | No |
| 48 | Slc1a4 | 6498 | 0.108 | 0.1741 | No |
| 49 | Rbbp8 | 6553 | 0.106 | 0.1748 | No |
| 50 | Clic3 | 6600 | 0.104 | 0.1759 | No |
| 51 | Plaat3 | 6642 | 0.102 | 0.1772 | No |
| 52 | Tnnc1 | 6719 | 0.099 | 0.1765 | No |
| 53 | Aldh3b1 | 6730 | 0.099 | 0.1793 | No |
| 54 | Fabp5 | 7004 | 0.088 | 0.1680 | No |
| 55 | Itpk1 | 7007 | 0.088 | 0.1708 | No |
| 56 | St14 | 7068 | 0.085 | 0.1705 | No |
| 57 | Pdcd4 | 7098 | 0.084 | 0.1718 | No |
| 58 | Cyp26b1 | 7218 | 0.080 | 0.1683 | No |
| 59 | Rab31 | 7274 | 0.078 | 0.1680 | No |
| 60 | Chpt1 | 7375 | 0.075 | 0.1653 | No |
| 61 | Cdh1 | 7409 | 0.074 | 0.1660 | No |
| 62 | Bag1 | 7498 | 0.071 | 0.1638 | No |
| 63 | Dcxr | 7616 | 0.065 | 0.1599 | No |
| 64 | Klf4 | 7714 | 0.061 | 0.1568 | No |
| 65 | Fos | 7728 | 0.060 | 0.1582 | No |
| 66 | Hspb8 | 7764 | 0.059 | 0.1583 | No |
| 67 | Myof | 7817 | 0.057 | 0.1575 | No |
| 68 | Plk4 | 7900 | 0.054 | 0.1551 | No |
| 69 | Gins2 | 8094 | 0.047 | 0.1466 | No |
| 70 | Idh2 | 8136 | 0.045 | 0.1459 | No |
| 71 | Olfm1 | 8544 | 0.030 | 0.1257 | No |
| 72 | Celsr2 | 8809 | 0.021 | 0.1126 | No |
| 73 | Tob1 | 8816 | 0.021 | 0.1130 | No |
| 74 | Car2 | 9057 | 0.014 | 0.1010 | No |
| 75 | Add3 | 9204 | 0.009 | 0.0937 | No |
| 76 | Dnajc1 | 9237 | 0.008 | 0.0923 | No |
| 77 | Jak1 | 9392 | 0.003 | 0.0843 | No |
| 78 | Id2 | 9402 | 0.002 | 0.0839 | No |
| 79 | Slc22a5 | 9413 | 0.002 | 0.0834 | No |
| 80 | Ltf | 9490 | 0.000 | 0.0795 | No |
| 81 | Bcl2 | 9637 | -0.001 | 0.0719 | No |
| 82 | Nxt1 | 9638 | -0.001 | 0.0719 | No |
| 83 | St6galnac2 | 9746 | -0.004 | 0.0665 | No |
| 84 | Dnajc12 | 10024 | -0.013 | 0.0525 | No |
| 85 | Unc13b | 10041 | -0.014 | 0.0521 | No |
| 86 | Xrcc3 | 10098 | -0.016 | 0.0497 | No |
| 87 | Hspa4l | 10235 | -0.021 | 0.0433 | No |
| 88 | Nab2 | 10254 | -0.022 | 0.0431 | No |
| 89 | Fkbp5 | 10389 | -0.027 | 0.0370 | No |
| 90 | Ncor2 | 10391 | -0.027 | 0.0378 | No |
| 91 | Frk | 10529 | -0.031 | 0.0317 | No |
| 92 | Llgl2 | 10532 | -0.031 | 0.0326 | No |
| 93 | Cish | 10643 | -0.035 | 0.0280 | No |
| 94 | Igfbp4 | 10665 | -0.036 | 0.0281 | No |
| 95 | Snx10 | 10907 | -0.044 | 0.0170 | No |
| 96 | Cd44 | 10947 | -0.046 | 0.0165 | No |
| 97 | Blvrb | 10981 | -0.047 | 0.0164 | No |
| 98 | Sult2b1 | 11048 | -0.049 | 0.0146 | No |
| 99 | Wfs1 | 11376 | -0.061 | -0.0005 | No |
| 100 | Nrip1 | 11749 | -0.076 | -0.0174 | No |
| 101 | Car12 | 11793 | -0.077 | -0.0170 | No |
| 102 | Abhd2 | 11890 | -0.081 | -0.0193 | No |
| 103 | Sord | 11930 | -0.082 | -0.0186 | No |
| 104 | Mapt | 11964 | -0.083 | -0.0176 | No |
| 105 | Ptges | 11972 | -0.083 | -0.0152 | No |
| 106 | Impa2 | 11974 | -0.083 | -0.0125 | No |
| 107 | Myb | 12426 | -0.101 | -0.0326 | No |
| 108 | Perp | 12565 | -0.106 | -0.0363 | No |
| 109 | Rabep1 | 12709 | -0.111 | -0.0400 | No |
| 110 | Elovl5 | 13169 | -0.127 | -0.0597 | No |
| 111 | Cav1 | 13170 | -0.127 | -0.0555 | No |
| 112 | Farp1 | 13252 | -0.131 | -0.0553 | No |
| 113 | Tpd52l1 | 13300 | -0.133 | -0.0534 | No |
| 114 | Fgfr3 | 13473 | -0.140 | -0.0576 | No |
| 115 | Dynlt3 | 13491 | -0.141 | -0.0538 | No |
| 116 | Ptpn6 | 13534 | -0.143 | -0.0512 | No |
| 117 | Mest | 13651 | -0.147 | -0.0524 | No |
| 118 | Isg20 | 13694 | -0.149 | -0.0496 | No |
| 119 | Jak2 | 13966 | -0.161 | -0.0584 | No |
| 120 | Slc26a2 | 13970 | -0.161 | -0.0531 | No |
| 121 | Aff1 | 13972 | -0.161 | -0.0478 | No |
| 122 | Etfb | 14131 | -0.169 | -0.0504 | No |
| 123 | Tiam1 | 14165 | -0.170 | -0.0464 | No |
| 124 | Lsr | 14306 | -0.176 | -0.0478 | No |
| 125 | Ret | 14315 | -0.176 | -0.0423 | No |
| 126 | Anxa9 | 14478 | -0.184 | -0.0447 | No |
| 127 | Pkp3 | 15139 | -0.214 | -0.0720 | No |
| 128 | Papss2 | 15140 | -0.214 | -0.0648 | No |
| 129 | Gale | 15188 | -0.216 | -0.0600 | No |
| 130 | Prlr | 15304 | -0.222 | -0.0586 | No |
| 131 | Ppif | 15338 | -0.223 | -0.0529 | No |
| 132 | Cd9 | 15531 | -0.233 | -0.0551 | No |
| 133 | Dhcr7 | 15648 | -0.239 | -0.0531 | No |
| 134 | Chst8 | 15990 | -0.256 | -0.0624 | No |
| 135 | Mocs2 | 16029 | -0.257 | -0.0557 | No |
| 136 | Pgr | 16318 | -0.274 | -0.0616 | No |
| 137 | Abca3 | 16627 | -0.292 | -0.0679 | No |
| 138 | Slc24a3 | 16799 | -0.303 | -0.0667 | No |
| 139 | S100a9 | 16817 | -0.304 | -0.0575 | No |
| 140 | Prkar2b | 17085 | -0.321 | -0.0607 | No |
| 141 | Plxnb1 | 17114 | -0.323 | -0.0513 | No |
| 142 | Cox6c | 17229 | -0.331 | -0.0462 | No |
| 143 | Zfp36 | 17535 | -0.358 | -0.0501 | No |
| 144 | Rnaseh2a | 17615 | -0.363 | -0.0421 | No |
| 145 | Tst | 17763 | -0.378 | -0.0372 | No |
| 146 | Batf | 18052 | -0.406 | -0.0386 | No |
| 147 | Mettl3 | 18195 | -0.417 | -0.0321 | No |
| 148 | Slc2a8 | 18473 | -0.461 | -0.0311 | No |
| 149 | Ckb | 18532 | -0.468 | -0.0185 | No |
| 150 | Hmgcs2 | 18720 | -0.506 | -0.0113 | No |
| 151 | Pdzk1 | 18981 | -0.591 | -0.0051 | No |
| 152 | Dusp2 | 19114 | -0.660 | 0.0101 | No |

