DatasetMEP.MEP.mega_Pheno.cls
#Group3_versus_Group4.MEP.mega_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.40114647
Normalized Enrichment Score (NES)1.346109
Nominal p-value0.23062016
FDR q-value0.577292
FWER p-Value0.7
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Cdc25b7160.555-0.0211Yes
2Cdkn2a7430.548-0.0062Yes
3Nop568290.5210.0048Yes
4Ppp1r88660.5120.0180Yes
5Kif18b10790.4730.0209Yes
6Ncapd216710.4070.0020Yes
7Slbp17180.4030.0115Yes
8Kif2c17390.4000.0223Yes
9Timeless17720.3990.0324Yes
10Mxd318350.3920.0408Yes
11Espl118680.3880.0506Yes
12Xpo118760.3870.0616Yes
13Zw1018810.3870.0728Yes
14Ung19230.3810.0820Yes
15Exosc820680.3640.0852Yes
16Spag520970.3610.0944Yes
17Rad121090.3600.1045Yes
18Cdc2021610.3560.1123Yes
19Mcm421760.3540.1220Yes
20Nup10721900.3530.1318Yes
21Cenpm22360.3470.1397Yes
22Tubb522690.3440.1482Yes
23Tacc322760.3420.1580Yes
24Ccnb222960.3410.1671Yes
25Trip1323370.3370.1750Yes
26Plk124160.3310.1807Yes
27Cdk124560.3290.1884Yes
28Cks1b26030.3180.1901Yes
29Cdca326690.3120.1959Yes
30Hmmr26710.3120.2051Yes
31Wdr9026790.3110.2139Yes
32Brca127490.3060.2193Yes
33Mki6727670.3050.2275Yes
34Cdca828410.2980.2325Yes
35Suv39h128580.2970.2404Yes
36Cse1l28770.2950.2482Yes
37Rpa230140.2850.2495Yes
38Cdkn2c30410.2830.2565Yes
39Ak231990.2720.2563Yes
40E2f833080.2680.2586Yes
41Cenpe33190.2670.2660Yes
42Tubg133240.2670.2737Yes
43Stmn133320.2660.2812Yes
44Pole33720.2630.2869Yes
45Chek134200.2590.2921Yes
46Lmnb134330.2580.2991Yes
47Srsf134510.2560.3058Yes
48Racgap134640.2550.3127Yes
49Asf1b35580.2520.3153Yes
50Srsf236240.2480.3193Yes
51Gins137320.2440.3209Yes
52Ubr737680.2430.3263Yes
53Bard138390.2420.3298Yes
54Spc2538980.2380.3338Yes
55Ipo739020.2380.3407Yes
56Ssrp139350.2360.3460Yes
57Rbbp741720.2220.3402Yes
58Cdkn1a41960.2200.3455Yes
59Ing342570.2170.3488Yes
60Kif443970.2110.3477Yes
61Tcf1944610.2070.3506Yes
62Rad2144660.2070.3565Yes
63Mcm645630.2010.3574Yes
64Ddx39a45770.2000.3626Yes
65Nup20546300.1970.3657Yes
66Rrm246820.1950.3688Yes
67Tipin46980.1940.3738Yes
68Ccne147760.1890.3753Yes
69Kif2248870.1820.3749Yes
70Aurkb49230.1810.3784Yes
71Hells49420.1790.3828Yes
72Aurka50350.1740.3831Yes
73Cbx550610.1720.3869Yes
74Nap1l151290.1690.3884Yes
75Bub1b51740.1660.3910Yes
76Depdc1a52330.1630.3928Yes
77Tra2b55100.1490.3827Yes
78Top2a55140.1490.3870Yes
79Tmpo55330.1490.3904Yes
80Ube2s56030.1460.3911Yes
81Ccp11057050.1410.3900Yes
82Tbrg458000.1360.3891Yes
83Pttg158120.1360.3925Yes
84Gins358610.1330.3940Yes
85H2ax59000.1320.3959Yes
86Dnmt159430.1300.3975Yes
87Msh259480.1300.4011Yes
88Hnrnpd60450.1270.3999No
89Gins461050.1240.4005No
90Cdkn362260.1190.3977No
91Mybl263700.1140.3936No
92Ube2t63860.1130.3961No
93Nbn64930.1090.3938No
94Cit65670.1050.3931No
95Mms22l66350.1030.3926No
96Mthfd266820.1010.3932No
97Xrcc668480.0950.3873No
98Dctpp169130.0910.3867No
99Spc2469860.0880.3855No
100Pold169960.0880.3877No
101Wee170180.0870.3892No
102Smc370350.0860.3909No
103Rfc171460.0820.3875No
104Smc471940.0810.3875No
105Rpa172040.0800.3894No
106Smc1a72670.0780.3884No
107Mcm374810.0720.3794No
108Cnot974910.0710.3810No
109Rad51c75500.0690.3800No
110Lbr75770.0680.3807No
111Syncrip76620.0630.3782No
112Atad277000.0620.3780No
113Paics77060.0610.3796No
114Melk77240.0610.3805No
115Ctcf78050.0570.3780No
116Mcm578210.0570.3789No
117Plk479000.0540.3764No
118Prkdc79410.0530.3759No
119Phf5a80280.0490.3729No
120Birc581100.0460.3700No
121Pa2g481130.0460.3712No
122Orc281710.0440.3695No
123Pan281840.0440.3702No
124Pds5b82220.0420.3695No
125Rpa383250.0390.3653No
126Prim283340.0380.3660No
127Dlgap583760.0370.3650No
128Mcm284630.0330.3615No
129Asf1a84730.0330.3620No
130Diaph385330.0310.3598No
131Usp186470.0280.3547No
132Dek89040.0200.3419No
133Pold389930.0160.3378No
134Lyar90070.0160.3376No
135Pcna90420.0150.3362No
136Prdx491230.0120.3324No
137Pms291560.0110.3310No
138Tfrc91690.0100.3307No
139Rad51ap192130.0090.3287No
140Rad5092470.0080.3272No
141Hmgb29678-0.0020.3048No
142Rfc29913-0.0100.2928No
143Prps110194-0.0190.2787No
144Lsm810200-0.0200.2790No
145Eed10232-0.0210.2780No
146Cdk410426-0.0280.2688No
147Nme110430-0.0280.2694No
148Gspt110444-0.0280.2696No
149Ezh210565-0.0320.2642No
150Ranbp110569-0.0320.2650No
151Dut10671-0.0360.2608No
152Brca210693-0.0370.2608No
153Mcm710702-0.0370.2614No
154Brms1l10715-0.0370.2619No
155Pnn10801-0.0410.2587No
156Psip110967-0.0460.2514No
157Myc11047-0.0490.2487No
158Cks211119-0.0520.2466No
159Cdc25a11151-0.0530.2465No
160Ilf311168-0.0540.2473No
161Psmc3ip11294-0.0580.2425No
162Jpt111436-0.0640.2370No
163Shmt111502-0.0660.2355No
164Luc7l311536-0.0670.2358No
165Nasp11627-0.0710.2332No
166Dclre1b11852-0.0790.2238No
167Nup15312057-0.0860.2157No
168Chek212091-0.0870.2165No
169Orc612231-0.0920.2120No
170Pole412309-0.0960.2108No
171Mad2l112465-0.1020.2057No
172Mre11a12620-0.1080.2008No
173Lig112641-0.1080.2030No
174Hmgb312851-0.1160.1955No
175Trp5312855-0.1160.1987No
176Rfc312987-0.1210.1955No
177Stag113273-0.1320.1845No
178Ran13297-0.1320.1872No
179Donson13339-0.1340.1890No
180Anp32e13351-0.1350.1924No
181Smc613502-0.1410.1887No
182Pola213527-0.1430.1917No
183Nudt2113859-0.1560.1790No
184Tk114216-0.1720.1654No
185H2az114237-0.1730.1695No
186Dck14311-0.1760.1709No
187Dscc114368-0.1790.1733No
188Snrpb14445-0.1820.1747No
189Cdkn1b14634-0.1920.1705No
190Eif2s114703-0.1950.1728No
191Ppm1d14785-0.2000.1744No
192Nolc115340-0.2230.1520No
193Hus115466-0.2300.1523No
194Hmga1b16352-0.2760.1142No
195Mlh116602-0.2900.1097No
196Pop717059-0.3200.0953No
197Rnaseh2a17615-0.3630.0770No
198Pold217861-0.3880.0757No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS