Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group3_versus_Group4.MEP.mega_Pheno.cls #Group3_versus_Group4_repos
Phenotype	MEP.mega_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	-0.25041607
Normalized Enrichment Score (NES)	-0.8658272
Nominal p-value	0.7869482
FDR q-value	0.91723514
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cd276	51	0.991	0.0241	No
2	Tjp1	182	0.783	0.0384	No
3	Nrtn	190	0.771	0.0588	No
4	Mpzl1	196	0.762	0.0791	No
5	Lama3	224	0.742	0.0977	No
6	Adra1b	582	0.592	0.0950	No
7	Lima1	638	0.580	0.1077	No
8	Negr1	661	0.572	0.1220	No
9	Evl	811	0.526	0.1284	No
10	Map4k2	1210	0.455	0.1199	No
11	Crb3	1408	0.437	0.1214	No
12	Mmp2	1584	0.418	0.1235	No
13	Nrap	1773	0.399	0.1245	No
14	Baiap2	2400	0.333	0.1008	No
15	Tro	2527	0.323	0.1029	No
16	Wasl	2654	0.313	0.1048	No
17	Myh10	2802	0.302	0.1052	No
18	Mapk11	2905	0.293	0.1078	No
19	Lamb3	3102	0.278	0.1050	No
20	Mdk	3189	0.273	0.1079	No
21	Cdh8	3221	0.270	0.1136	No
22	Cldn14	3223	0.270	0.1208	No
23	Nfasc	3259	0.270	0.1263	No
24	Map3k20	3311	0.268	0.1308	No
25	Tubg1	3324	0.267	0.1374	No
26	Cd34	3402	0.260	0.1404	No
27	Col17a1	3863	0.240	0.1229	No
28	Slit2	4023	0.231	0.1208	No
29	Cldn15	4096	0.227	0.1232	No
30	Cdk8	4584	0.199	0.1031	No
31	Shc1	4619	0.198	0.1067	No
32	Plcg1	5193	0.165	0.0812	No
33	Arhgef6	5706	0.141	0.0583	No
34	Sdc3	5725	0.140	0.0611	No
35	Icam2	5801	0.136	0.0608	No
36	Thy1	5802	0.136	0.0645	No
37	Insig1	6264	0.117	0.0436	No
38	Gnai1	6344	0.115	0.0425	No
39	Itgb4	6808	0.097	0.0210	No
40	Mapk14	6811	0.096	0.0235	No
41	Myl12b	6812	0.096	0.0261	No
42	Rasa1	6911	0.091	0.0234	No
43	Nlgn2	7028	0.087	0.0197	No
44	Tsc1	7093	0.084	0.0186	No
45	Epb41l2	7202	0.081	0.0152	No
46	Amigo2	7298	0.077	0.0123	No
47	Pik3r3	7300	0.077	0.0143	No
48	Cdh1	7409	0.074	0.0107	No
49	Tial1	7639	0.065	0.0004	No
50	Tspan4	7651	0.064	0.0016	No
51	Gtf2f1	7763	0.059	-0.0026	No
52	Nectin2	7787	0.058	-0.0022	No
53	Inppl1	8342	0.038	-0.0301	No
54	Msn	8365	0.037	-0.0303	No
55	Sympk	8541	0.031	-0.0386	No
56	Pkd1	8564	0.030	-0.0390	No
57	Cdh4	8628	0.028	-0.0415	No
58	Nf2	8710	0.025	-0.0450	No
59	Hadh	8766	0.023	-0.0473	No
60	Crat	9003	0.016	-0.0592	No
61	Ctnnd1	9147	0.011	-0.0663	No
62	Dhx16	9299	0.006	-0.0741	No
63	Itga9	9757	-0.004	-0.0978	No
64	Itga3	9862	-0.008	-0.1030	No
65	Nf1	9958	-0.011	-0.1077	No
66	Pard6g	10137	-0.017	-0.1165	No
67	Cx3cl1	10499	-0.030	-0.1346	No
68	Ctnna1	10784	-0.040	-0.1483	No
69	Cadm2	10936	-0.045	-0.1550	No
70	Dlg1	11213	-0.055	-0.1679	No
71	Nexn	11217	-0.056	-0.1665	No
72	Vwf	11567	-0.069	-0.1829	No
73	Actn4	11576	-0.069	-0.1814	No
74	Vcam1	11643	-0.071	-0.1830	No
75	B4galt1	11840	-0.079	-0.1911	No
76	Exoc4	11911	-0.082	-0.1925	No
77	Vcan	12038	-0.085	-0.1968	No
78	Vasp	12050	-0.085	-0.1951	No
79	Cadm3	12170	-0.090	-0.1989	No
80	Pals1	12262	-0.094	-0.2011	No
81	Shroom2	12263	-0.094	-0.1986	No
82	Ikbkg	12302	-0.095	-0.1980	No
83	Pten	12419	-0.100	-0.2013	No
84	Adam15	12444	-0.101	-0.1999	No
85	Akt2	12474	-0.102	-0.1986	No
86	Gnai2	12555	-0.105	-0.2000	No
87	Cercam	12646	-0.109	-0.2017	No
88	Pfn1	12751	-0.113	-0.2041	No
89	Rac2	12782	-0.114	-0.2026	No
90	Thbs3	12823	-0.115	-0.2016	No
91	Fbn1	12844	-0.116	-0.1995	No
92	Kcnh2	12886	-0.118	-0.1985	No
93	Syk	13012	-0.122	-0.2017	No
94	Nectin3	13054	-0.123	-0.2005	No
95	Hras	13159	-0.127	-0.2025	No
96	Vav2	13298	-0.132	-0.2062	No
97	Taok2	13402	-0.137	-0.2079	No
98	Stx4a	13944	-0.160	-0.2318	No
99	Akt3	14272	-0.175	-0.2442	No
100	Actb	14356	-0.178	-0.2437	No
101	Ptk2	14476	-0.184	-0.2449	No
102	Col16a1	14561	-0.189	-0.2442	No
103	Src	14659	-0.193	-0.2441	No
104	Ptprc	14781	-0.200	-0.2450	Yes
105	Sgce	14841	-0.203	-0.2426	Yes
106	Cd274	14893	-0.206	-0.2398	Yes
107	Adamts5	14980	-0.206	-0.2387	Yes
108	Rhof	15041	-0.208	-0.2362	Yes
109	Myh9	15074	-0.210	-0.2322	Yes
110	Nectin4	15216	-0.218	-0.2337	Yes
111	Itgb1	15393	-0.226	-0.2368	Yes
112	Irs1	15460	-0.229	-0.2341	Yes
113	Ldlrap1	15585	-0.236	-0.2342	Yes
114	Arpc2	15684	-0.240	-0.2328	Yes
115	Skap2	15891	-0.252	-0.2368	Yes
116	Ywhah	16014	-0.257	-0.2362	Yes
117	Jam3	16083	-0.261	-0.2327	Yes
118	Traf1	16141	-0.265	-0.2286	Yes
119	Bmp1	16314	-0.274	-0.2302	Yes
120	Tmem8b	16422	-0.281	-0.2282	Yes
121	Icam4	16437	-0.282	-0.2213	Yes
122	Amigo1	16521	-0.286	-0.2179	Yes
123	Actn1	16567	-0.289	-0.2125	Yes
124	Sorbs3	16594	-0.290	-0.2061	Yes
125	Vcl	16621	-0.291	-0.1996	Yes
126	Cap1	16671	-0.294	-0.1942	Yes
127	Nectin1	16978	-0.315	-0.2017	Yes
128	Actg1	17192	-0.327	-0.2040	Yes
129	Mvd	17213	-0.330	-0.1961	Yes
130	Rsu1	17311	-0.338	-0.1921	Yes
131	Amh	17349	-0.341	-0.1848	Yes
132	Gamt	17416	-0.347	-0.1789	Yes
133	Jup	17493	-0.354	-0.1733	Yes
134	Sirpa	17531	-0.358	-0.1656	Yes
135	Nlgn3	17542	-0.359	-0.1565	Yes
136	Cd86	17556	-0.360	-0.1474	Yes
137	Zyx	17567	-0.360	-0.1383	Yes
138	Wnk4	17569	-0.360	-0.1286	Yes
139	Layn	17700	-0.372	-0.1254	Yes
140	Cdh11	17839	-0.386	-0.1222	Yes
141	Rras	17869	-0.389	-0.1132	Yes
142	Cnn2	17875	-0.389	-0.1030	Yes
143	Nrxn2	17977	-0.399	-0.0975	Yes
144	Myl9	18064	-0.408	-0.0910	Yes
145	Tgfbi	18115	-0.413	-0.0825	Yes
146	Pik3cb	18304	-0.434	-0.0806	Yes
147	Adam9	18373	-0.446	-0.0721	Yes
148	Itga2	18485	-0.463	-0.0654	Yes
149	Icam1	18603	-0.480	-0.0586	Yes
150	Itga10	18634	-0.487	-0.0470	Yes
151	Pecam1	18647	-0.489	-0.0345	Yes
152	Actn2	18664	-0.492	-0.0220	Yes
153	Atp1a3	18847	-0.542	-0.0169	Yes
154	Icam5	19208	-0.750	-0.0155	Yes
155	Pbx2	19218	-0.765	0.0046	Yes