Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group2_versus_Group4.MEP.mega_Pheno.cls #Group2_versus_Group4_repos
Phenotype	MEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.16738692
Normalized Enrichment Score (NES)	0.60343415
Nominal p-value	0.98136646
FDR q-value	0.9539095
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Fosb	88	0.828	0.0156	Yes
2	Tnip2	133	0.772	0.0322	Yes
3	Fut4	204	0.717	0.0460	Yes
4	Tiparp	360	0.639	0.0535	Yes
5	Atf3	374	0.633	0.0683	Yes
6	Trip10	381	0.630	0.0834	Yes
7	Traf1	584	0.571	0.0868	Yes
8	Ninj1	726	0.538	0.0926	Yes
9	Plk2	782	0.528	0.1026	Yes
10	Il6st	917	0.509	0.1080	Yes
11	Il1b	942	0.505	0.1191	Yes
12	Bhlhe40	964	0.500	0.1302	Yes
13	Kynu	1148	0.473	0.1322	Yes
14	Cd69	1224	0.465	0.1396	Yes
15	Il7r	1285	0.456	0.1476	Yes
16	Jun	1406	0.441	0.1521	Yes
17	Bcl3	1605	0.420	0.1520	Yes
18	Nr4a3	1934	0.387	0.1443	Yes
19	Rhob	1961	0.384	0.1523	Yes
20	Dusp1	2118	0.369	0.1532	Yes
21	Mcl1	2148	0.366	0.1606	Yes
22	Irs2	2233	0.357	0.1649	Yes
23	Fos	2390	0.346	0.1652	Yes
24	Trib1	2508	0.339	0.1674	Yes
25	Serpinb8	2688	0.327	0.1660	No
26	Ier5	3100	0.298	0.1518	No
27	Il6	3265	0.286	0.1502	No
28	Pdlim5	3433	0.275	0.1482	No
29	Hes1	3447	0.274	0.1543	No
30	Zc3h12a	3626	0.263	0.1514	No
31	Btg3	3821	0.251	0.1473	No
32	Ldlr	3842	0.250	0.1524	No
33	Sgk1	4085	0.238	0.1456	No
34	Nampt	4222	0.230	0.1441	No
35	Smad3	4271	0.227	0.1471	No
36	Rel	4323	0.224	0.1499	No
37	Atp2b1	4454	0.216	0.1484	No
38	Plpp3	4690	0.204	0.1411	No
39	Map2k3	4812	0.196	0.1396	No
40	Maff	4840	0.195	0.1429	No
41	Ccnl1	4906	0.192	0.1442	No
42	Tank	4972	0.188	0.1454	No
43	Hbegf	4974	0.188	0.1500	No
44	Pmepa1	5047	0.184	0.1507	No
45	Btg2	5069	0.184	0.1541	No
46	Tnfaip3	5472	0.166	0.1371	No
47	Plau	5581	0.161	0.1354	No
48	Id2	5900	0.149	0.1224	No
49	Cd80	6015	0.142	0.1199	No
50	Ifit2	6037	0.140	0.1223	No
51	Yrdc	6166	0.134	0.1189	No
52	Socs3	6230	0.131	0.1188	No
53	Jag1	6338	0.126	0.1162	No
54	Nfkb2	6344	0.125	0.1190	No
55	Klf2	6372	0.124	0.1207	No
56	Csf1	6439	0.121	0.1202	No
57	Relb	6443	0.121	0.1230	No
58	Nfil3	6504	0.118	0.1227	No
59	Birc2	6535	0.116	0.1240	No
60	Vegfa	6551	0.116	0.1260	No
61	Ets2	6659	0.110	0.1231	No
62	Lamb3	6672	0.110	0.1251	No
63	Bmp2	6704	0.108	0.1262	No
64	Tnip1	6868	0.100	0.1201	No
65	Slc16a6	6925	0.097	0.1195	No
66	Per1	6927	0.097	0.1219	No
67	Klf6	7029	0.092	0.1189	No
68	Klf10	7102	0.089	0.1173	No
69	Dennd5a	7191	0.086	0.1148	No
70	Plek	7336	0.080	0.1092	No
71	Dram1	7392	0.077	0.1082	No
72	B4galt1	7469	0.073	0.1060	No
73	Irf1	7585	0.069	0.1017	No
74	Ccnd1	7774	0.061	0.0934	No
75	Gfpt2	7891	0.056	0.0887	No
76	Nfe2l2	7919	0.055	0.0886	No
77	Olr1	8332	0.037	0.0680	No
78	Zbtb10	8404	0.034	0.0651	No
79	Il15ra	8820	0.015	0.0438	No
80	Ifih1	9007	0.009	0.0343	No
81	Ifngr2	9173	0.002	0.0257	No
82	Litaf	9632	-0.015	0.0021	No
83	Plaur	9698	-0.017	-0.0008	No
84	Klf9	9706	-0.018	-0.0008	No
85	Cdkn1a	9757	-0.020	-0.0029	No
86	Rigi	9761	-0.020	-0.0026	No
87	Slc2a6	9783	-0.021	-0.0031	No
88	Nr4a2	9784	-0.021	-0.0026	No
89	Klf4	9839	-0.023	-0.0049	No
90	Nfkbie	9909	-0.026	-0.0078	No
91	Birc3	9990	-0.030	-0.0113	No
92	Slc2a3	10108	-0.034	-0.0166	No
93	Nfkbia	10309	-0.043	-0.0260	No
94	Cxcl5	10318	-0.044	-0.0253	No
95	Tnfrsf9	10359	-0.045	-0.0263	No
96	Ripk2	10384	-0.046	-0.0264	No
97	Junb	10401	-0.047	-0.0261	No
98	Cebpd	10450	-0.049	-0.0274	No
99	Ier2	10748	-0.060	-0.0415	No
100	Rnf19b	11071	-0.073	-0.0565	No
101	Ehd1	11086	-0.073	-0.0555	No
102	Nr4a1	11318	-0.083	-0.0655	No
103	Egr3	11520	-0.090	-0.0738	No
104	Sat1	11774	-0.100	-0.0846	No
105	Btg1	11874	-0.105	-0.0872	No
106	Nfkb1	11979	-0.109	-0.0900	No
107	Rcan1	12013	-0.111	-0.0890	No
108	Il1a	12028	-0.111	-0.0870	No
109	Stat5a	12093	-0.114	-0.0875	No
110	Gpr183	12107	-0.115	-0.0854	No
111	Gch1	12225	-0.119	-0.0886	No
112	Rela	12297	-0.122	-0.0893	No
113	Pfkfb3	12503	-0.132	-0.0968	No
114	Cd44	12511	-0.133	-0.0939	No
115	Dnajb4	12627	-0.138	-0.0966	No
116	Tgif1	12719	-0.142	-0.0979	No
117	Sqstm1	12976	-0.154	-0.1075	No
118	Cflar	12990	-0.155	-0.1044	No
119	Phlda1	13289	-0.168	-0.1159	No
120	Mxd1	13354	-0.170	-0.1151	No
121	Icam1	13653	-0.185	-0.1261	No
122	Tnfaip8	13673	-0.186	-0.1226	No
123	Pde4b	13696	-0.187	-0.1192	No
124	Kdm6b	13749	-0.189	-0.1173	No
125	Serpinb2	13751	-0.190	-0.1127	No
126	Fosl1	13862	-0.194	-0.1137	No
127	Tlr2	13927	-0.198	-0.1122	No
128	Fjx1	13934	-0.198	-0.1077	No
129	Tubb2a	14010	-0.202	-0.1067	No
130	Phlda2	14406	-0.219	-0.1220	No
131	Il18	14456	-0.221	-0.1191	No
132	Bcl6	14528	-0.224	-0.1174	No
133	Tsc22d1	14788	-0.238	-0.1251	No
134	Dusp4	14877	-0.243	-0.1237	No
135	Ptger4	14900	-0.245	-0.1189	No
136	Myc	15146	-0.258	-0.1254	No
137	Zfp36	15204	-0.261	-0.1220	No
138	Panx1	15214	-0.261	-0.1161	No
139	Gadd45b	15284	-0.265	-0.1132	No
140	Tnfsf9	15562	-0.281	-0.1208	No
141	Fosl2	15568	-0.282	-0.1142	No
142	Nfat5	15570	-0.282	-0.1074	No
143	Sphk1	15707	-0.289	-0.1074	No
144	Cxcl10	15733	-0.290	-0.1017	No
145	Map3k8	15829	-0.296	-0.0994	No
146	Tnfaip2	15945	-0.303	-0.0980	No
147	Tnf	16117	-0.315	-0.0992	No
148	Marcks	16206	-0.320	-0.0960	No
149	Snn	16358	-0.330	-0.0958	No
150	Ier3	16477	-0.339	-0.0937	No
151	Dusp5	16626	-0.349	-0.0929	No
152	Ppp1r15a	16684	-0.353	-0.0873	No
153	Abca1	16782	-0.361	-0.0835	No
154	B4galt5	16977	-0.375	-0.0845	No
155	Cebpb	17006	-0.378	-0.0767	No
156	Tap1	17367	-0.406	-0.0856	No
157	Ptpre	17447	-0.414	-0.0796	No
158	Ccl5	17492	-0.416	-0.0718	No
159	Sod2	17786	-0.449	-0.0761	No
160	Icosl	17966	-0.467	-0.0741	No
161	Gem	18073	-0.483	-0.0678	No
162	Spsb1	18141	-0.493	-0.0593	No
163	Pnrc1	18216	-0.504	-0.0508	No
164	Ccrl2	18217	-0.504	-0.0385	No
165	Gadd45a	18603	-0.572	-0.0447	No
166	Clcf1	18708	-0.598	-0.0355	No
167	Eif1	18754	-0.609	-0.0230	No
168	Egr1	19071	-0.744	-0.0213	No
169	Dusp2	19305	-1.375	0.0001	No