DatasetMEP.MEP.mega_Pheno.cls
#Group2_versus_Group4.MEP.mega_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_PROTEIN_SECRETION
Enrichment Score (ES)0.24820344
Normalized Enrichment Score (NES)1.2259291
Nominal p-value0.208
FDR q-value1.0
FWER p-Value0.85
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PROTEIN_SECRETION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Zw101140.7940.0328Yes
2Dst3290.6540.0536Yes
3Lman13820.6300.0816Yes
4Sspn6430.5590.0953Yes
5Galc8340.5200.1108Yes
6Atp6v1h9330.5060.1303Yes
7Stam11210.4770.1438Yes
8Cltc18100.3990.1275Yes
9Atp1a119430.3870.1395Yes
10Copb219600.3840.1574Yes
11Golga420660.3740.1702Yes
12Ctsc21060.3690.1861Yes
13Uso123210.3500.1920Yes
14Stx1624080.3450.2044Yes
15Pam25260.3380.2147Yes
16Snx230890.2980.2000Yes
17Napg31090.2970.2135Yes
18Arf133340.2820.2156Yes
19Arcn134300.2750.2241Yes
20Ap3b136280.2630.2267Yes
21Copb140610.2400.2159Yes
22Stx741180.2360.2245Yes
23Rps6ka341910.2320.2320Yes
24Tmx141980.2310.2430Yes
25Atp7a46300.2080.2307Yes
26Ap1g147550.2000.2339Yes
27Arfgef248580.1940.2381Yes
28Vamp349430.1900.2429Yes
29Tmed1050170.1860.2482Yes
30Stx1254550.1670.2336No
31Yipf655430.1620.2370No
32Gosr257240.1570.2353No
33Ap3s157390.1560.2421No
34Clcn360030.1420.2354No
35Ica163020.1280.2261No
36Sec31a66300.1120.2145No
37Arfgef166650.1100.2181No
38Adam1066690.1100.2233No
39Sec22b67540.1060.2241No
40Lamp268820.1000.2223No
41Vamp469260.0970.2248No
42Mon270070.0940.2253No
43Bnip372150.0850.2186No
44Ocrl72680.0830.2200No
45Rab22a76230.0670.2048No
46Ykt680360.0500.1858No
47Bet181270.0470.1834No
48Mapk181520.0460.1844No
49Kif1b82310.0420.1824No
50Ap2b182790.0400.1819No
51Tspan884730.0300.1733No
52Dop1a86130.0230.1672No
53Scamp186870.0200.1644No
54Anp32e87200.0190.1636No
55Gbf187220.0190.1645No
56Ppt187280.0190.1652No
57Ap2m189670.0100.1533No
58Vps4b90160.0080.1512No
59Arfgap392100.0000.1411No
60Rab2a9455-0.0070.1288No
61Sgms19532-0.0100.1253No
62Sh3gl29646-0.0150.1202No
63Cln510189-0.0380.0938No
64Tpd5210862-0.0640.0620No
65Gla10876-0.0640.0644No
66Arfip111178-0.0770.0525No
67Cope11395-0.0860.0455No
68Rab1411494-0.0890.0447No
69M6pr11566-0.0910.0455No
70Dnm1l11663-0.0950.0451No
71Rab5a11802-0.1020.0429No
72Vps4512341-0.1240.0209No
73Cog212445-0.1290.0218No
74Clta12505-0.1320.0252No
75Snap2312735-0.1430.0203No
76Tsg10112892-0.1500.0195No
77Igf2r13256-0.1660.0087No
78Scrn113962-0.199-0.0183No
79Cd6314050-0.204-0.0129No
80Ap2s114803-0.239-0.0403No
81Sec24d16647-0.350-0.1192No
82Abca116782-0.361-0.1086No
83Napa17021-0.379-0.1025No
84Rab917128-0.388-0.0891No
85Sod117497-0.417-0.0879No
86Rer117592-0.427-0.0720No
87Gnas17945-0.465-0.0677No
88Scamp318348-0.524-0.0630No
89Ergic318479-0.547-0.0432No
90Krt1818521-0.553-0.0183No
91Tom1l118571-0.5630.0066No
92Cav218881-0.6490.0222No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PROTEIN_SECRETION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PROTEIN_SECRETION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PROTEIN_SECRETION