DatasetMEP.MEP.mega_Pheno.cls
#Group2_versus_Group4.MEP.mega_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.428433
Normalized Enrichment Score (NES)-1.4860144
Nominal p-value0.10721248
FDR q-value0.5525127
FWER p-Value0.444
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Lrpprc5160.588-0.0154No
2Mtrf15900.570-0.0080No
3Atp6v1h9330.506-0.0159No
4Hspa910530.485-0.0126No
5Dlst15100.428-0.0280No
6Hccs15570.422-0.0221No
7Idh3b15760.421-0.0147No
8Mtx217440.406-0.0155No
9Hadhb17530.405-0.0079No
10Mrps2217790.401-0.0013No
11Aco218520.3950.0027No
12Pdhx28310.313-0.0423No
13Immt31030.297-0.0506No
14Dld31130.297-0.0452No
15Bckdha31520.295-0.0414No
16Cox1132470.287-0.0407No
17Acadsb32900.285-0.0373No
18Slc25a2033840.278-0.0366No
19Tomm70a36430.262-0.0450No
20Opa136500.262-0.0401No
21Ndufs637490.256-0.0402No
22Cox1043250.223-0.0659No
23Pmpca44200.218-0.0665No
24Ndufa544380.217-0.0631No
25Uqcrq48210.196-0.0792No
26Gpi149050.192-0.0798No
27Atp6v0e49100.192-0.0762No
28Cox1749970.187-0.0770No
29Ndufs151370.180-0.0808No
30Mrps1153150.174-0.0866No
31Afg3l254270.169-0.0891No
32Ogdh54600.167-0.0874No
33Aldh6a156990.158-0.0968No
34Acaa257150.157-0.0945No
35Uqcr1159710.144-0.1050No
36Acadm59960.143-0.1034No
37Timm960230.141-0.1020No
38Ndufa960450.140-0.1003No
39Idh260620.139-0.0984No
40Ndufb661990.132-0.1030No
41Oxa1l62430.130-0.1026No
42Ndufa763620.125-0.1063No
43Supv3l168860.099-0.1317No
44Hadha68870.099-0.1298No
45Alas170190.093-0.1348No
46Atp6v1c170740.091-0.1358No
47Oat72990.082-0.1459No
48Mrps3073280.080-0.1458No
49Rhot174050.076-0.1483No
50Ndufs477430.062-0.1647No
51Fdx177940.060-0.1661No
52Retsat78390.059-0.1673No
53Acaa1a78900.056-0.1688No
54Ndufs279090.055-0.1686No
55Dlat79240.055-0.1683No
56Ech181580.045-0.1796No
57Uqcr1082190.043-0.1818No
58Got282430.042-0.1822No
59Glud184550.031-0.1927No
60Sucla287890.016-0.2097No
61Uqcrfs188140.016-0.2107No
62Rhot289120.013-0.2155No
63Vdac190420.008-0.2221No
64Mrpl1590650.007-0.2231No
65Pdha190880.006-0.2242No
66Nnt91070.005-0.2250No
67Uqcrc192030.000-0.2300No
68Mrpl119374-0.003-0.2388No
69Fh19482-0.008-0.2442No
70Mgst39579-0.012-0.2490No
71Sdha9644-0.015-0.2521No
72Mrps129815-0.022-0.2605No
73Atp6ap19862-0.024-0.2624No
74Mdh19865-0.024-0.2621No
75Atp1b19955-0.028-0.2662No
76Abcb710188-0.038-0.2775No
77Cox5b10381-0.046-0.2867No
78Ndufa410398-0.046-0.2866No
79Bax10479-0.050-0.2898No
80Timm17a10585-0.054-0.2942No
81Cox7c10728-0.059-0.3005No
82Pdk410751-0.060-0.3004No
83Acadvl11356-0.084-0.3304No
84Ndufa811366-0.085-0.3292No
85Uqcrc211436-0.087-0.3310No
86Mrpl3511640-0.094-0.3398No
87Atp6v1f11945-0.108-0.3536No
88Eci112012-0.111-0.3548No
89Mtrr12169-0.117-0.3607No
90Surf112232-0.120-0.3616No
91Slc25a1112518-0.133-0.3739No
92Etfa12611-0.137-0.3760No
93Fxn12709-0.141-0.3783No
94Idh3a12759-0.144-0.3780No
95Atp6v0b12902-0.150-0.3825No
96Vdac312953-0.153-0.3821No
97Ndufc213138-0.161-0.3885No
98Cpt1a13278-0.167-0.3925No
99Atp5pb13415-0.173-0.3962No
100Ndufc113466-0.176-0.3953No
101Nqo213503-0.177-0.3937No
102Cox6c13706-0.187-0.4006No
103Cyc113712-0.187-0.3972No
104Cox7a2l13794-0.191-0.3977No
105Acat113832-0.193-0.3958No
106Ndufs713843-0.193-0.3925No
107Mrpl3413966-0.200-0.3949No
108Suclg114319-0.214-0.4091No
109Ndufb214418-0.219-0.4099No
110Decr114598-0.228-0.4148No
111Vdac214652-0.231-0.4130No
112Uqcrb14820-0.241-0.4170No
113Sdhb14966-0.249-0.4197No
114Gpx415060-0.254-0.4195No
115Cs15231-0.262-0.4233Yes
116Ndufs815294-0.266-0.4213Yes
117Bdh215315-0.267-0.4171Yes
118Aifm115323-0.268-0.4122Yes
119Prdx315345-0.269-0.4080Yes
120Cox1515452-0.275-0.4081Yes
121Polr2f15529-0.280-0.4065Yes
122Etfdh15610-0.285-0.4051Yes
123Ldhb15748-0.291-0.4066Yes
124Cox8a15880-0.300-0.4075Yes
125Ndufa115888-0.300-0.4019Yes
126Casp715934-0.303-0.3983Yes
127Atp6v1g115958-0.304-0.3936Yes
128Mfn215986-0.306-0.3889Yes
129Ndufs316061-0.311-0.3867Yes
130Por16176-0.318-0.3864Yes
131Mdh216185-0.319-0.3805Yes
132Mpc116541-0.344-0.3923Yes
133Ndufv216589-0.347-0.3879Yes
134Cyb5a16696-0.354-0.3865Yes
135Cox4i116705-0.355-0.3799Yes
136Hsd17b1016770-0.359-0.3762Yes
137Ndufb816950-0.374-0.3782Yes
138Ndufv117067-0.383-0.3767Yes
139Pdp117118-0.387-0.3717Yes
140Etfb17225-0.395-0.3695Yes
141Grpel117257-0.397-0.3633Yes
142Phb217292-0.399-0.3572Yes
143Cox7a217301-0.400-0.3497Yes
144Ndufb517345-0.403-0.3440Yes
145Timm8b17541-0.422-0.3459Yes
146Echs117559-0.424-0.3385Yes
147Slc25a317578-0.426-0.3310Yes
148Sdhc17654-0.433-0.3264Yes
149Slc25a517759-0.445-0.3231Yes
150Sdhd17773-0.447-0.3149Yes
151Ndufb317933-0.464-0.3141Yes
152Tcirg118119-0.490-0.3141Yes
153Uqcrh18135-0.492-0.3052Yes
154Ndufa618199-0.501-0.2987Yes
155Atp6v1e118215-0.504-0.2895Yes
156Ldha18390-0.532-0.2882Yes
157Mrps1518456-0.542-0.2809Yes
158Pdhb18472-0.545-0.2709Yes
159Ndufa318509-0.551-0.2620Yes
160Cox6b118583-0.566-0.2546Yes
161Idh118737-0.604-0.2507Yes
162Timm5018759-0.612-0.2398Yes
163Atp6v0c18803-0.624-0.2297Yes
164Atp6v1d18866-0.644-0.2203Yes
165Cox6a118895-0.655-0.2089Yes
166Timm1018903-0.658-0.1963Yes
167Tomm2218930-0.667-0.1845Yes
168Cox5a18978-0.691-0.1734Yes
169Cox7b18979-0.691-0.1597Yes
170Phyh18993-0.700-0.1466Yes
171Htra219036-0.727-0.1345Yes
172Timm1319052-0.736-0.1208Yes
173Ndufa219054-0.737-0.1064Yes
174Iscu19059-0.738-0.0920Yes
175Idh3g19134-0.791-0.0803Yes
176Slc25a419135-0.791-0.0647Yes
177Ndufab119145-0.809-0.0493Yes
178Slc25a1219210-0.881-0.0353Yes
179Cyb5r319234-0.935-0.0181Yes
180Ndufb719274-1.1090.0017Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION